Clone Name | rbasd16d06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CCR1_MOUSE (P51675) C-C chemokine receptor type 1 (C-C CKR-1) (C... | 29 | 9.6 |
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>CCR1_MOUSE (P51675) C-C chemokine receptor type 1 (C-C CKR-1) (CC-CKR-1)| (CCR-1) (CCR1) (Macrophage inflammatory protein 1-alpha receptor) (MIP-1alpha-R) (RANTES-R) (CD191 antigen) Length = 355 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = -2 Query: 388 LVLVLGYQKAGSMLTGQGACKRLCAVSICFAVLLVIPLHWIPRNLLVCI 242 LV+++ Y +L + + K++ AV + FA+ L+ L W P NL V + Sbjct: 213 LVMIICYAGIIRILLRRPSEKKVKAVRLIFAITLLFFLLWTPYNLSVFV 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,502,431 Number of Sequences: 219361 Number of extensions: 1589189 Number of successful extensions: 3366 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 3299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3366 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)