>emb|AL358533.6| Human DNA sequence from clone RP11-456F13 on chromosome 1, complete
             sequence
          Length = 103390

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 399   atataaattatagaaattgtaa 420
             ||||||||||||||||||||||
Sbjct: 41194 atataaattatagaaattgtaa 41215

>emb|AL645584.27| Mouse DNA sequence from clone RP23-280M7 on chromosome 1 Contains a
             novel gene and two CpG islands, complete sequence
          Length = 171382

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 235   agaaaattatacaaaccaataa 256
             ||||||||||||||||||||||
Sbjct: 82915 agaaaattatacaaaccaataa 82936

>gb|DQ219803.1| Sendai virus strain BB1, complete genome
          Length = 15384

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   tgttatctttcaccggcttcc 223
             |||||||||||||||||||||
Sbjct: 11931 tgttatctttcaccggcttcc 11911

>emb|CR392021.10| Zebrafish DNA sequence from clone CH211-126H20 in linkage group 5,
              complete sequence
          Length = 182008

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 225    ctgaaaaatcagaaaattata 245
              |||||||||||||||||||||
Sbjct: 134034 ctgaaaaatcagaaaattata 134014

>gb|AC091826.3| Homo sapiens chromosome 5 clone CTC-498M16, complete sequence
          Length = 133498

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  ttcccctgaaaaatcagaaaattat 244
            |||| ||||||||||||||||||||
Sbjct: 7018 ttcctctgaaaaatcagaaaattat 6994

>emb|BX511001.6| Zebrafish DNA sequence from clone DKEY-201C13 in linkage group 5,
             complete sequence
          Length = 53155

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 395   atgaatataaattatagaaat 415
             |||||||||||||||||||||
Sbjct: 53101 atgaatataaattatagaaat 53081

>gb|AC108052.3| Homo sapiens BAC clone RP11-335K21 from 4, complete sequence
          Length = 152797

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     ttgttttgccttagctatgta 27
             |||||||||||||||||||||
Sbjct: 81999 ttgttttgccttagctatgta 82019

>gb|AC114978.2| Homo sapiens chromosome 5 clone RP11-512I16, complete sequence
          Length = 40890

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 220  ttcccctgaaaaatcagaaaattat 244
            |||| ||||||||||||||||||||
Sbjct: 2721 ttcctctgaaaaatcagaaaattat 2745

>gb|AC087315.21| Homo sapiens 12p BAC RP11-626A3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 154443

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   ttcccctgaaaaatcagaaaattat 244
             |||| ||||||||||||||||||||
Sbjct: 85505 ttcctctgaaaaatcagaaaattat 85481

>gb|AC068397.6| Homo sapiens chromosome 15, clone RP11-272D12, complete sequence
          Length = 169892

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 97     gagagagggtggttgtgtgaagagc 121
              |||||||||||||||| ||||||||
Sbjct: 161874 gagagagggtggttgtctgaagagc 161898

>gb|AC009660.15| Homo sapiens chromosome 15, clone RP11-424J10, complete sequence
          Length = 214166

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 97     gagagagggtggttgtgtgaagagc 121
              |||||||||||||||| ||||||||
Sbjct: 131073 gagagagggtggttgtctgaagagc 131049

>emb|BX323080.10| Zebrafish DNA sequence from clone DKEY-148E22 in linkage group 5,
            complete sequence
          Length = 146204

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 395  atgaatataaattatagaaat 415
            |||||||||||||||||||||
Sbjct: 1946 atgaatataaattatagaaat 1926

>gb|AC003973.1|AC003973 Homo sapiens DNA from chromosome 19, BAC 33152, complete sequence
          Length = 165199

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 228   aaaaatcagaaaattatacaaacca 252
             ||||||| |||||||||||||||||
Sbjct: 53232 aaaaatccgaaaattatacaaacca 53208

>gb|AF396436.1| Tetrahymena thermophila strain SB210 mitochondrion, complete genome
          Length = 47577

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 398   aatataaattatagaaattgt 418
             |||||||||||||||||||||
Sbjct: 17792 aatataaattatagaaattgt 17772

>emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, complete sequence
          Length = 212403

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 56     gtctgtgagattgccagtacatttt 80
              |||||||| ||||||||||||||||
Sbjct: 207308 gtctgtgacattgccagtacatttt 207332

>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence
          Length = 177014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 235    agaaaattatacaaaccaata 255
              |||||||||||||||||||||
Sbjct: 148211 agaaaattatacaaaccaata 148231

>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18,
             complete sequence
          Length = 182116

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    gtctgtgagattgccagtacatttt 80
             |||||||| ||||||||||||||||
Sbjct: 70794 gtctgtgacattgccagtacatttt 70770

>gb|AC115855.9| Mus musculus chromosome 3, clone RP24-277E17, complete sequence
          Length = 182349

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   aataccaaaaccaacctccc 394
             ||||||||||||||||||||
Sbjct: 50588 aataccaaaaccaacctccc 50569

>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28,
             complete sequence
          Length = 168371

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   aatataaattatagaaattg 417
             ||||||||||||||||||||
Sbjct: 18642 aatataaattatagaaattg 18623

>gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21.3, complete sequence
          Length = 125222

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   tagcctaataccaaaaccaa 388
             ||||||||||||||||||||
Sbjct: 12165 tagcctaataccaaaaccaa 12146

>emb|CT025531.9| Mouse DNA sequence from clone RP23-280C13 on chromosome 9, complete
              sequence
          Length = 206038

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    aaattatacaaaccaataaa 257
              ||||||||||||||||||||
Sbjct: 155218 aaattatacaaaccaataaa 155237

>gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, complete sequence
          Length = 176632

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    tagcctaataccaaaaccaa 388
              ||||||||||||||||||||
Sbjct: 144461 tagcctaataccaaaaccaa 144480

>emb|CR762407.8| Zebrafish DNA sequence from clone DKEY-262N17 in linkage group 6,
              complete sequence
          Length = 146422

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    aattatacaaaccaataaat 258
              ||||||||||||||||||||
Sbjct: 103603 aattatacaaaccaataaat 103584

>emb|AL137852.15| Human DNA sequence from clone RP11-131A5 on chromosome 9q32-34.11
              Contains the RAD23B gene for RA23B homolog B (S.
              cerevisiae) and three CpG islands, complete sequence
          Length = 162509

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 218    gcttcccctgaaaaatcagaaaat 241
              ||||| ||||||||||||||||||
Sbjct: 157300 gcttctcctgaaaaatcagaaaat 157277

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     gcattgcacccacacctgga 194
               ||||||||||||||||||||
Sbjct: 3310247 gcattgcacccacacctgga 3310228

>gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    tagcctaataccaaaaccaa 388
              ||||||||||||||||||||
Sbjct: 184367 tagcctaataccaaaaccaa 184348

>gb|AC092723.3| Homo sapiens chromosome 16 clone RP11-542M13, complete sequence
          Length = 188458

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    gaaattgtaagcctcgttta 430
              ||||||||||||||||||||
Sbjct: 134637 gaaattgtaagcctcgttta 134656

>gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    tagcctaataccaaaaccaa 388
              ||||||||||||||||||||
Sbjct: 184368 tagcctaataccaaaaccaa 184349

>gb|AC157997.2| Mus musculus BAC clone RP24-129N18 from chromosome 9, complete sequence
          Length = 178445

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    aaattatacaaaccaataaa 257
              ||||||||||||||||||||
Sbjct: 164302 aaattatacaaaccaataaa 164321

>gb|AC006516.10| Homo sapiens X BAC GSHB-557D6 (Genome Systems Human BAC Library)
             complete sequence
          Length = 72265

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   aatataaattatagaaattg 417
             ||||||||||||||||||||
Sbjct: 66430 aatataaattatagaaattg 66411

>emb|AL845455.7| Mouse DNA sequence from clone RP23-325E4 on chromosome 2, complete
             sequence
          Length = 143689

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   ctgaaaaatcagaaaattat 244
             ||||||||||||||||||||
Sbjct: 81507 ctgaaaaatcagaaaattat 81488

>gb|U36397.1|APU36397 Actinobacillus pleuropneumoniae region 1 capsular polysaccharide
            transport genes, cpxD, cpxC, cpxB and cpxA genes,
            complete cds
          Length = 4576

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 404  aattatagaaattgtaagcctcgt 427
            |||||||||| |||||||||||||
Sbjct: 4176 aattatagaacttgtaagcctcgt 4153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,837,740
Number of Sequences: 3902068
Number of extensions: 4837740
Number of successful extensions: 94908
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94825
Number of HSP's gapped (non-prelim): 83
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)