ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15o01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
2gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 135 2e-28
4gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str... 135 2e-28
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6gb|AY109543.1| Zea mays CL854_1 mRNA sequence 76 1e-10
7gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti... 62 2e-06
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9dbj|AK058352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
11ref|NM_196102.1| Oryza sativa (japonica cultivar-group) putative... 60 8e-06
12gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, com... 46 0.13
13gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, com... 46 0.13
14gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome... 42 2.0
15emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on ch... 42 2.0
16dbj|BS000589.1| Pan troglodytes chromosome Y clone:PTB-234J08, c... 42 2.0
17dbj|BS000592.1| Pan troglodytes chromosome Y clone:PTB-024O19, c... 42 2.0
18gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 2.0
19gb|AC011416.3| Homo sapiens chromosome 5 clone CTB-88F18, comple... 42 2.0
20gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome... 42 2.0
21gb|AC151722.2| Pan troglodytes BAC clone CH251-580N2 from chromo... 42 2.0
22gb|AC005915.1|AC005915 Homo sapiens chromosome 5, Bac clone 58g1... 42 2.0
23emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chr... 42 2.0
24gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, comp... 40 7.9
25gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, comp... 40 7.9
26gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete se... 40 7.9
27gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, comp... 40 7.9
28emb|AL513191.4| Human DNA sequence from clone RP11-224F24 on chr... 40 7.9
29emb|AL157770.12| Human DNA sequence from clone RP11-490N5 on chr... 40 7.9
30gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence 40 7.9
31emb|AL034422.24|HS1141E15 Human DNA sequence from clone RP5-1141... 40 7.9
32emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chr... 40 7.9
33gb|AC108217.3| Homo sapiens BAC clone RP11-681L8 from 4, complet... 40 7.9
34gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park C... 40 7.9
35gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 40 7.9
36gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chrom... 40 7.9
37gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 7.9
38gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G... 40 7.9
39emb|AJ507388.2|SMO507388 Soybean mosaic virus gene for polyprote... 40 7.9
40gb|AC092574.2| Homo sapiens BAC clone RP11-2H3 from 4, complete ... 40 7.9
41gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromoso... 40 7.9
42gb|AC099850.7| Homo sapiens chromosome 17, clone CTD-2510F5, com... 40 7.9
43gb|AF272983.1|AF272983 Homo sapiens SRC tyrosine kinase gene, ex... 40 7.9
44gb|AC007285.3|AC007285 Homo sapiens BAC clone RP11-576P10 from 7... 40 7.9
45gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete s... 40 7.9
46gb|AC114632.9| Mus musculus chromosome 5, clone RP24-114E20, com... 40 7.9
47gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, com... 40 7.9
48emb|Z79756.1|CEF53C11 Caenorhabditis elegans Cosmid F53C11, comp... 40 7.9
49gb|AE015927.1| Clostridium tetani E88, complete genome 40 7.9
50gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 40 7.9
51emb|AL359237.4|CNS05TEO Human chromosome 14 DNA sequence BAC R-1... 40 7.9
52emb|AL158059.3|CNS01RGK Human chromosome 14 DNA sequence BAC C-2... 40 7.9 
>dbj|AK073386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E22, full
            insert sequence
          Length = 2582

 Score =  151 bits (76), Expect = 3e-33
 Identities = 139/158 (87%), Gaps = 4/158 (2%)
 Strand = Plus / Minus

                                                                        
Query: 427  aggttccaccttggatttatgtgccgaacacaaagccatgaaagaacctaaacaagcttc 486
            ||||||||||||||||| ||| | | | ||  |||||| ||||||||||||| |||||||
Sbjct: 2176 aggttccaccttggattcatgcgtccaccaagaagccacgaaagaacctaaagaagcttc 2117

                                                                        
Query: 487  ttccatattcaa---ga-atgtcaccgccatgcagaagatacaaccagctttctgttctt 542
            ||||| ||| |    || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 ttccaaattaacacggagatgtcaccgccatgcagaagatacaaccagctttctgttctt 2057

                                                  
Query: 543  ccatccaagataaatgacaccatctttctcctctagct 580
            |||||||||||||| | |||||||| ||||||||||||
Sbjct: 2056 ccatccaagataaagggcaccatctctctcctctagct 2019
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>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNOa0279P04, complete sequence
          Length = 32479

 Score =  135 bits (68), Expect = 2e-28
 Identities = 77/80 (96%)
 Strand = Plus / Minus

                                                                         
Query: 501   atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 17761 atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaagggc 17702

                                 
Query: 561   accatctttctcctctagct 580
             ||||||| ||||||||||||
Sbjct: 17701 accatctctctcctctagct 17682
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 2e-28
 Identities = 77/80 (96%)
 Strand = Plus / Minus

                                                                           
Query: 501     atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 4834125 atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaagggc 4834066

                                   
Query: 561     accatctttctcctctagct 580
               ||||||| ||||||||||||
Sbjct: 4834065 accatctctctcctctagct 4834046
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>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score =  135 bits (68), Expect = 2e-28
 Identities = 77/80 (96%)
 Strand = Plus / Plus

                                                                        
Query: 501  atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 1330 atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaagggc 1389

                                
Query: 561  accatctttctcctctagct 580
            ||||||| ||||||||||||
Sbjct: 1390 accatctctctcctctagct 1409
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 2e-28
 Identities = 77/80 (96%)
 Strand = Plus / Minus

                                                                           
Query: 501     atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 4834240 atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaagggc 4834181

                                   
Query: 561     accatctttctcctctagct 580
               ||||||| ||||||||||||
Sbjct: 4834180 accatctctctcctctagct 4834161
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>gb|AY109543.1| Zea mays CL854_1 mRNA sequence
          Length = 2341

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 514  gcagaagatacaaccagctttctgttcttccatccaagataaatgacaccatctttctcc 573
            ||||||||||| |||||||||||||||||||| |||||||||| ||  |||||| |||||
Sbjct: 1941 gcagaagatacgaccagctttctgttcttccagccaagataaaggatgccatctctctcc 1882

              
Query: 574  tc 575
            ||
Sbjct: 1881 tc 1880



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 425  ttaggttccaccttggatttatgtgccgaac 455
            ||||||||||||||||||| |||||| ||||
Sbjct: 2041 ttaggttccaccttggattcatgtgctgaac 2011
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>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 501   atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
             |||||| | ||||||||||||||||||||    |||||||||||||||||| ||||  ||
Sbjct: 68995 atgtcaacaccatgcagaagatacaaccaatactctgttcttccatccaaggtaaagaac 68936

                    
Query: 561   accatct 567
             |||||||
Sbjct: 68935 accatct 68929
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                            
Query: 501      atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
                |||||| | ||||||||||||||||||||    |||||||||||||||||| ||||  ||
Sbjct: 11090062 atgtcaacaccatgcagaagatacaaccaatactctgttcttccatccaaggtaaagaac 11090121

                       
Query: 561      accatct 567
                |||||||
Sbjct: 11090122 accatct 11090128
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>dbj|AK058352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E08, full
           insert sequence
          Length = 1336

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 501 atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
           |||||| | ||||||||||||||||||||    |||||||||||||||||| ||||  ||
Sbjct: 891 atgtcaacaccatgcagaagatacaaccaatactctgttcttccatccaaggtaaagaac 832

                  
Query: 561 accatct 567
           |||||||
Sbjct: 831 accatct 825
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                            
Query: 501      atgtcaccgccatgcagaagatacaaccagctttctgttcttccatccaagataaatgac 560
                |||||| | ||||||||||||||||||||    |||||||||||||||||| ||||  ||
Sbjct: 11096502 atgtcaacaccatgcagaagatacaaccaatactctgttcttccatccaaggtaaagaac 11096561

                       
Query: 561      accatct 567
                |||||||
Sbjct: 11096562 accatct 11096568
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>ref|NM_196102.1| Oryza sativa (japonica cultivar-group) putative SCARECROW gene
            regulator-like (OJ1003C07.9), mRNA
          Length = 1575

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 510  ccatgcagaagatacaaccagctttctgttcttccatccaagataaatgacaccatct 567
            ||||||||||||||||||||    |||||||||||||||||| ||||  |||||||||
Sbjct: 1569 ccatgcagaagatacaaccaatactctgttcttccatccaaggtaaagaacaccatct 1512
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>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence
          Length = 171061

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 547   ccaagataaatgacaccatcttt 569
             |||||||||||||||||||||||
Sbjct: 58657 ccaagataaatgacaccatcttt 58679
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>gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, complete sequence
          Length = 185083

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 547    ccaagataaatgacaccatcttt 569
              |||||||||||||||||||||||
Sbjct: 184194 ccaagataaatgacaccatcttt 184216
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>gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome 14, complete sequence
          Length = 207264

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    aactgtgtgccagctaccatg 141
              |||||||||||||||||||||
Sbjct: 192191 aactgtgtgccagctaccatg 192171
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>emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on chromosome X, complete
              sequence
          Length = 192780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 168    taaagatcagagagaaaaaat 188
              |||||||||||||||||||||
Sbjct: 160357 taaagatcagagagaaaaaat 160337
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>dbj|BS000589.1| Pan troglodytes chromosome Y clone:PTB-234J08, complete sequence
          Length = 179633

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 32     ttgtgtgacatatacatacaataaa 56
              ||||||||||||||| |||||||||
Sbjct: 100773 ttgtgtgacatatacttacaataaa 100749
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>dbj|BS000592.1| Pan troglodytes chromosome Y clone:PTB-024O19, complete sequence
          Length = 133142

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 32     ttgtgtgacatatacatacaataaa 56
              ||||||||||||||| |||||||||
Sbjct: 116684 ttgtgtgacatatacttacaataaa 116660
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 32       ttgtgtgacatatacatacaataaa 56
                ||||||||||||||| |||||||||
Sbjct: 20487125 ttgtgtgacatatacttacaataaa 20487149
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>gb|AC011416.3| Homo sapiens chromosome 5 clone CTB-88F18, complete sequence
          Length = 142357

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    agagaaaaaatgaaactacaa 198
              |||||||||||||||||||||
Sbjct: 121597 agagaaaaaatgaaactacaa 121617
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>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence
          Length = 234665

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    aactgtgtgccagctaccatg 141
              |||||||||||||||||||||
Sbjct: 218159 aactgtgtgccagctaccatg 218179
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>gb|AC151722.2| Pan troglodytes BAC clone CH251-580N2 from chromosome y, complete
             sequence
          Length = 182549

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 32    ttgtgtgacatatacatacaataaa 56
             ||||||||||||||| |||||||||
Sbjct: 70033 ttgtgtgacatatacttacaataaa 70009
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>gb|AC005915.1|AC005915 Homo sapiens chromosome 5, Bac clone 58g14 (LBNL H76), complete sequence
          Length = 151026

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 178    agagaaaaaatgaaactacaa 198
              |||||||||||||||||||||
Sbjct: 116385 agagaaaaaatgaaactacaa 116365
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>emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chromosome 4, complete
              sequence
          Length = 174746

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 168    taaagatcagagagaaaaaat 188
              |||||||||||||||||||||
Sbjct: 146661 taaagatcagagagaaaaaat 146641
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>gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, complete sequence
          Length = 211735

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   tagcataagctccagttttc 164
             ||||||||||||||||||||
Sbjct: 34385 tagcataagctccagttttc 34366
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>gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 160    ttttcgcataaagatcagagagaaaaaa 187
              |||||| ||||| |||||||||||||||
Sbjct: 107076 ttttcggataaacatcagagagaaaaaa 107103
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>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence
          Length = 87839

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   atcagagagaaaaaatgaaa 192
             ||||||||||||||||||||
Sbjct: 57731 atcagagagaaaaaatgaaa 57712
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>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 160   ttttcgcataaagatcagagagaaaaaa 187
             |||||| ||||| |||||||||||||||
Sbjct: 27882 ttttcggataaacatcagagagaaaaaa 27855
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>emb|AL513191.4| Human DNA sequence from clone RP11-224F24 on chromosome 1 Contains the 5'
              end of a novel gene novel gene (FLJ34497), complete
              sequence
          Length = 153830

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    aaagaacctaaacaagcttc 486
              ||||||||||||||||||||
Sbjct: 140230 aaagaacctaaacaagcttc 140249
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>emb|AL157770.12| Human DNA sequence from clone RP11-490N5 on chromosome 13 Contains two
             novel genes, complete sequence
          Length = 61615

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   aagcagccacagttctttgg 401
             ||||||||||||||||||||
Sbjct: 49675 aagcagccacagttctttgg 49694
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>gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence
          Length = 167543

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   ttcttccatccaagataaat 557
             ||||||||||||||||||||
Sbjct: 23712 ttcttccatccaagataaat 23693
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>emb|AL034422.24|HS1141E15 Human DNA sequence from clone RP5-1141E15 on chromosome 20q11.23-12
             Contains the 5' end of GHRH gene for growth hormone
             releasing hormone, the MANBAL gene for mannosidase beta A
             lysosomal-like, the 5' end of the SRC gene for v-src avian
             sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog and a
             CpG island, complete sequence
          Length = 113681

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   tccatattcaagaatgtcac 507
             ||||||||||||||||||||
Sbjct: 83827 tccatattcaagaatgtcac 83808
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>emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the 3'
              end of the Nipsnap1 gene for 4-nitrophenylphosphatase
              domain and non-neuronal SNAP25-like protein homolog 1 (C.
              elegans), a novel gene, a ribosomal protein L17 (Rpl17)
              pseudogene, the Nefh gene for neurofilament heavy
              polypeptide, the Ap1b1 gene for adaptor protein complex
              AP-1 beta 1 subunit, the gene for the ortholog of human
              RAS-related protein on chromosome 22, the gene for the
              ortholog of human growth arrest-specific 2 like 1 GAS2L1
              and six CpG islands, complete sequence
          Length = 183758

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    cataaagatcagagagaaaaaatg 189
              |||| |||||||||||||||||||
Sbjct: 107660 catacagatcagagagaaaaaatg 107637
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>gb|AC108217.3| Homo sapiens BAC clone RP11-681L8 from 4, complete sequence
          Length = 111201

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tgtgcgcaggggagggttga 362
             ||||||||||||||||||||
Sbjct: 33655 tgtgcgcaggggagggttga 33636
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>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 191886

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   actgtgtgccagctaccatg 141
             ||||||||||||||||||||
Sbjct: 60935 actgtgtgccagctaccatg 60954
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     taaagatcagagagaaaaaa 187
               ||||||||||||||||||||
Sbjct: 1342334 taaagatcagagagaaaaaa 1342353
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>gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chromosome unknown, complete
              sequence
          Length = 210950

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    aagcagccacagttctttgg 401
              ||||||||||||||||||||
Sbjct: 150549 aagcagccacagttctttgg 150530
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 490    catattcaagaatgtcaccgccat 513
              |||||||||||| |||||||||||
Sbjct: 729878 catattcaagaacgtcaccgccat 729855
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>gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G24 map 15q21.3, complete
             sequence
          Length = 174672

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgtgacatatacatacaata 54
             ||||||||||||||||||||
Sbjct: 74281 tgtgacatatacatacaata 74300
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>emb|AJ507388.2|SMO507388 Soybean mosaic virus gene for polyprotein, genomic RNA, strain P
          Length = 9735

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 524 caaccagctttctgttcttccatc 547
           ||||||||||||||||||| ||||
Sbjct: 70  caaccagctttctgttctttcatc 93
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>gb|AC092574.2| Homo sapiens BAC clone RP11-2H3 from 4, complete sequence
          Length = 144117

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgtgacatatacatacaata 54
             ||||||||||||||||||||
Sbjct: 80022 tgtgacatatacatacaata 80041
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>gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromosome 7, complete
             sequence
          Length = 196949

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgtgacatatacatacaata 54
             ||||||||||||||||||||
Sbjct: 86761 tgtgacatatacatacaata 86742
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>gb|AC099850.7| Homo sapiens chromosome 17, clone CTD-2510F5, complete sequence
          Length = 210344

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgtgacatatacatacaata 54
              ||||||||||||||||||||
Sbjct: 178400 tgtgacatatacatacaata 178381
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>gb|AF272983.1|AF272983 Homo sapiens SRC tyrosine kinase gene, exons 1alpha and 1a,
            alternatively spliced
          Length = 4688

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 488  tccatattcaagaatgtcac 507
            ||||||||||||||||||||
Sbjct: 2606 tccatattcaagaatgtcac 2587
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>gb|AC007285.3|AC007285 Homo sapiens BAC clone RP11-576P10 from 7p11.2-p21, complete sequence
          Length = 140619

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   ttcttccatccaagataaat 557
             ||||||||||||||||||||
Sbjct: 56485 ttcttccatccaagataaat 56466
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>gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete sequence
          Length = 56862

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   taaagatcagagagaaaaaa 187
             ||||||||||||||||||||
Sbjct: 29909 taaagatcagagagaaaaaa 29928
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>gb|AC114632.9| Mus musculus chromosome 5, clone RP24-114E20, complete sequence
          Length = 160308

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   accagctttctgttcttcca 545
             ||||||||||||||||||||
Sbjct: 98590 accagctttctgttcttcca 98609
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>gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, complete sequence
          Length = 153206

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  tagcataagctccagttttc 164
            ||||||||||||||||||||
Sbjct: 1343 tagcataagctccagttttc 1362
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>emb|Z79756.1|CEF53C11 Caenorhabditis elegans Cosmid F53C11, complete sequence
          Length = 34796

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 178   agagaaaaaatgaaactacaagga 201
             ||||||||||||||| ||||||||
Sbjct: 33824 agagaaaaaatgaaattacaagga 33847
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aaatatattagtagaagttg 21
             ||||||||||||||||||||
Sbjct: 29841 aaatatattagtagaagttg 29822
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>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    gagaaaaaatgaaactacaa 198
              ||||||||||||||||||||
Sbjct: 986122 gagaaaaaatgaaactacaa 986141
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>emb|AL359237.4|CNS05TEO Human chromosome 14 DNA sequence BAC R-1152H15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162119

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   gtagcagcagcatggtttgtacct 286
             ||||||| ||||||||||||||||
Sbjct: 11822 gtagcaggagcatggtttgtacct 11845
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>emb|AL158059.3|CNS01RGK Human chromosome 14 DNA sequence BAC C-2007A10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 148515

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   gtagcagcagcatggtttgtacct 286
             ||||||| ||||||||||||||||
Sbjct: 35433 gtagcaggagcatggtttgtacct 35410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,993,048
Number of Sequences: 3902068
Number of extensions: 5993048
Number of successful extensions: 110620
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110277
Number of HSP's gapped (non-prelim): 337
length of query: 580
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 557
effective length of database: 17,143,297,704
effective search space: 9548816821128
effective search space used: 9548816821128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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