Clone Name | rbasd16c23 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_194132.2| Oryza sativa (japonica cultivar-group), mRNA Length = 559 Score = 270 bits (136), Expect = 4e-69 Identities = 205/228 (89%) Strand = Plus / Minus Query: 206 cttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggcgtgctc 265 ||||||||| ||||||||| | |||||||||||||||||||||||||| || ||||| Sbjct: 334 cttgaggtgagggaagcacgcggtgaggtcgctcttcggatgcttcgcctcagcatgctc 275 Query: 266 cttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgcactggat 325 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 tttgcacttggtctcagaggtggtgcagatgaaagtctgcatgcatatcttgcactggat 215 Query: 326 gttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagcttctcgag 385 |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||| | Sbjct: 214 gttcatggccttcttgttggcctcaagctggctccccttggcgcccttgttcttctccat 155 Query: 386 gttcctctccctcgccatcttggacttctgagcgttgccgccgcccat 433 ||||||||||||||||||||| |||||||| | |||||||||||||| Sbjct: 154 gttcctctccctcgccatcttcgacttctgcccattgccgccgcccat 107
>dbj|AK062043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A07, full insert sequence Length = 559 Score = 270 bits (136), Expect = 4e-69 Identities = 205/228 (89%) Strand = Plus / Minus Query: 206 cttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggcgtgctc 265 ||||||||| ||||||||| | |||||||||||||||||||||||||| || ||||| Sbjct: 334 cttgaggtgagggaagcacgcggtgaggtcgctcttcggatgcttcgcctcagcatgctc 275 Query: 266 cttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgcactggat 325 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 tttgcacttggtctcagaggtggtgcagatgaaagtctgcatgcatatcttgcactggat 215 Query: 326 gttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagcttctcgag 385 |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||| | Sbjct: 214 gttcatggccttcttgttggcctcaagctggctccccttggcgcccttgttcttctccat 155 Query: 386 gttcctctccctcgccatcttggacttctgagcgttgccgccgcccat 433 ||||||||||||||||||||| |||||||| | |||||||||||||| Sbjct: 154 gttcctctccctcgccatcttcgacttctgcccattgccgccgcccat 107
>gb|AY107008.1| Zea mays PCO148957 mRNA sequence Length = 672 Score = 244 bits (123), Expect = 2e-61 Identities = 204/231 (88%) Strand = Plus / Minus Query: 206 cttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggcgtgctc 265 |||||||||||||||||||||| |||||| |||| |||||| ||||||| || || || Sbjct: 335 cttgaggtgggggaagcactggtagaggtcgttcttgggatgcctcgcctccgcatgttc 276 Query: 266 cttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgcactggat 325 |||||||| || || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 275 tttgcacttggcctcggaggtggtgcagatgaaggtctgcatgcagatcttgcactggat 216 Query: 326 gttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagcttctcgag 385 |||||||||||||||||||||||| |||||||| || ||||||||||| ||||||| Sbjct: 215 gttcatggccttcttgttggcctccagctggctgcctttgccgcccttgttcttctcggc 156 Query: 386 gttcctctccctcgccatcttggacttctgagcgttgccgccgcccatggc 436 ||||||||| | |||||||||||||||||| ||||||||||||||||||| Sbjct: 155 gttcctctcgcgcgccatcttggacttctggccgttgccgccgcccatggc 105
>gb|AY107168.1| Zea mays PCO087750 mRNA sequence Length = 922 Score = 143 bits (72), Expect = 6e-31 Identities = 195/236 (82%) Strand = Plus / Minus Query: 200 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 259 ||||| ||| || ||||||||||||||| | ||| |||| |||||||| |||||||| Sbjct: 553 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 494 Query: 260 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 319 ||||||| |||||| |||||| ||||| || ||||| || |||||||| | ||||| Sbjct: 493 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 434 Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 379 ||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| ||| Sbjct: 433 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 374 Query: 380 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 435 ||| | ||| | ||| | ||||||||||||||||| ||||||| |||||||||| Sbjct: 373 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 318
>gb|BT016277.1| Zea mays clone Contig110 mRNA sequence Length = 644 Score = 139 bits (70), Expect = 9e-30 Identities = 184/222 (82%) Strand = Plus / Minus Query: 214 gggggaagcactggacaaggtcgctcttcggatgcttcgcctcggcgtgctccttgcact 273 |||||||||||||| | ||| |||| |||||||| ||||||||||||||| ||||| Sbjct: 343 gggggaagcactggtacacgtctgtcttgggatgcttggcctcggcgtgctcccggcact 284 Query: 274 ttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgcactggatgttcatgg 333 | |||||| ||||| || ||||| || |||||||| | |||||||||||| |||||| Sbjct: 283 tcacttcagtcgtggtacacatgaatgtttgcatgcacactttgcactggatgctcatgg 224 Query: 334 ccttcttgttggcctcgagctggctccccttgccgcccttcagcttctcgaggttcctct 393 |||||||||||| ||||||||||||||||||| | ||||| |||||| | ||| | || Sbjct: 223 ccttcttgttggtctcgagctggctccccttggcccccttgttcttctccaagttgcgct 164 Query: 394 ccctcgccatcttggacttctgagcgttgccgccgcccatgg 435 | | ||||||||||||||||| ||||||| |||||||||| Sbjct: 163 cgcgggccatcttggacttctggccgttgccaccgcccatgg 122
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 206 cttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggcgtgctc 265 ||||||||| ||||||||| | |||||||||||||||||||||||||| || ||||| Sbjct: 797716 cttgaggtgagggaagcacgcggtgaggtcgctcttcggatgcttcgcctcagcatgctc 797657 Query: 266 cttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgcactg 322 |||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797656 tttgcacttggtctcagaggtggtgcagatgaaagtctgcatgcatatcttgcactg 797600 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccc 361 |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 796820 ctggatgttcatggccttcttgttggcctcaagctggctccc 796779 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 360 cccttgccgcccttcagcttctcgaggttcctctccctcgccatcttggacttctgagcg 419 |||||| ||||||| |||||| | ||||||||||||||||||||| |||||||| | Sbjct: 796645 cccttggcgcccttgttcttctccatgttcctctccctcgccatcttcgacttctgccca 796586 Query: 420 ttgccgccgcccat 433 |||||||||||||| Sbjct: 796585 ttgccgccgcccat 796572
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 206 cttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggcgtgctc 265 ||||||||| ||||||||| | |||||||||||||||||||||||||| || ||||| Sbjct: 117523 cttgaggtgagggaagcacgcggtgaggtcgctcttcggatgcttcgcctcagcatgctc 117464 Query: 266 cttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgcactg 322 |||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117463 tttgcacttggtctcagaggtggtgcagatgaaagtctgcatgcatatcttgcactg 117407 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccc 361 |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 116627 ctggatgttcatggccttcttgttggcctcaagctggctccc 116586 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 360 cccttgccgcccttcagcttctcgaggttcctctccctcgccatcttggacttctgagcg 419 |||||| ||||||| |||||| | ||||||||||||||||||||| |||||||| | Sbjct: 116452 cccttggcgcccttgttcttctccatgttcctctccctcgccatcttcgacttctgccca 116393 Query: 420 ttgccgccgcccat 433 |||||||||||||| Sbjct: 116392 ttgccgccgcccat 116379
>ref|XM_468864.1| Oryza sativa (japonica cultivar-group), mRNA Length = 404 Score = 99.6 bits (50), Expect = 8e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 379 |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| Sbjct: 205 ctggatgttcatggccttcttgttggtctcaagctggctccccttggcgcccttggcctt 146 Query: 380 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccat 433 ||| | ||| | ||| | |||||| |||||||||| |||||||||||||||| Sbjct: 145 ctccatgttgcgctcgcgggccatcctggacttctgcccgttgccgccgcccat 92
>ref|XM_468863.1| Oryza sativa (japonica cultivar-group), mRNA Length = 551 Score = 99.6 bits (50), Expect = 8e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 379 |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| Sbjct: 242 ctggatgttcatggccttcttgttggtctcaagctggctccccttggcgcccttggcctt 183 Query: 380 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccat 433 ||| | ||| | ||| | |||||| |||||||||| |||||||||||||||| Sbjct: 182 ctccatgttgcgctcgcgggccatcctggacttctgcccgttgccgccgcccat 129
>dbj|AK066154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J04, full insert sequence Length = 683 Score = 99.6 bits (50), Expect = 8e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 379 |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| Sbjct: 251 ctggatgttcatggccttcttgttggtctcaagctggctccccttggcgcccttggcctt 192 Query: 380 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccat 433 ||| | ||| | ||| | |||||| |||||||||| |||||||||||||||| Sbjct: 191 ctccatgttgcgctcgcgggccatcctggacttctgcccgttgccgccgcccat 138
>dbj|AK058503.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F08, full insert sequence Length = 757 Score = 99.6 bits (50), Expect = 8e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 379 |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||| Sbjct: 217 ctggatgttcatggccttcttgttggtctcaagctggctccccttggcgcccttggcctt 158 Query: 380 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccat 433 ||| | ||| | ||| | |||||| |||||||||| |||||||||||||||| Sbjct: 157 ctccatgttgcgctcgcgggccatcctggacttctgcccgttgccgccgcccat 104
>gb|BT013724.1| Lycopersicon esculentum clone 132575F, mRNA sequence Length = 577 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Minus Query: 300 gtctgcatgcatatcttgcactggatgttcatggccttcttgttggcctcgagctggctc 359 |||||||| |||| |||||||||||| ||||||||||| ||||| | |||||||| || Sbjct: 238 gtctgcatacataccttgcactggatattcatggcctttttgttcgtatcgagctgactt 179 Query: 360 cccttgccgcccttcagcttctcgaggttcctctccctcgccatcttggacttctgagcg 419 || || | |||||||||||||| || |||||||||| |||||||| | |||||| || Sbjct: 178 cctttagcacccttcagcttctccagattcctctcccgagccatcttcgctttctgaccg 119 Query: 420 ttgccgccgcccatg 434 ||||| || |||||| Sbjct: 118 ttgcctccacccatg 104
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccc 361 |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 18392096 ctggatgttcatggccttcttgttggtctcaagctggctccc 18392055 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 399 gccatcttggacttctgagcgttgccgccgcccat 433 |||||| |||||||||| |||||||||||||||| Sbjct: 18391895 gccatcctggacttctgcccgttgccgccgcccat 18391861
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccc 361 |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 158527 ctggatgttcatggccttcttgttggtctcaagctggctccc 158486 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 399 gccatcttggacttctgagcgttgccgccgcccat 433 |||||| |||||||||| |||||||||||||||| Sbjct: 158326 gccatcctggacttctgcccgttgccgccgcccat 158292
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccc 361 |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 18386137 ctggatgttcatggccttcttgttggtctcaagctggctccc 18386096 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 399 gccatcttggacttctgagcgttgccgccgcccat 433 |||||| |||||||||| |||||||||||||||| Sbjct: 18385936 gccatcctggacttctgcccgttgccgccgcccat 18385902
>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete sequence Length = 90673 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 320 ctggatgttcatggccttcttgttggcctcgagctggctccc 361 |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 89119 ctggatgttcatggccttcttgttggtctcaagctggctccc 89160 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 399 gccatcttggacttctgagcgttgccgccgcccat 433 |||||| |||||||||| |||||||||||||||| Sbjct: 89320 gccatcctggacttctgcccgttgccgccgcccat 89354
>ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G23090 mRNA, complete cds Length = 580 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 333 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 274 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 273 gtttgcatacaaaccttgcactg 251
>gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds Length = 237 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 197 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 138 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 137 gtttgcatacaaaccttgcactg 115
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 313 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 254 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 253 gtttgcatacaaaccttgcactg 231
>gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds Length = 475 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 270 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 211 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 210 gtttgcatacaaaccttgcactg 188
>gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds Length = 480 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 273 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 214 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 213 gtttgcatacaaaccttgcactg 191
>emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 322 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 263 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 262 gtttgcatacaaaccttgcactg 240
>emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS46ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 487 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 240 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 181 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 180 gtttgcatacaaaccttgcactg 158
>gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, complete sequence Length = 571 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 332 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 273 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 272 gtttgcatacaaaccttgcactg 250
>gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 map CIC06C07, complete sequence Length = 94038 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 ||||||||||||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 61258 ttcggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaat 61317 Query: 300 gtctgcatgcatatcttgcact 321 || ||||| || | |||||||| Sbjct: 61318 gtttgcatacaaaccttgcact 61339
>emb|BX821485.1|CNS0A95U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 412 Score = 56.0 bits (28), Expect = 1e-04 Identities = 71/84 (84%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctc-ggcgtgctccttgcactttgcttcagaggtggtgcagatgaa 298 ||||||||||||||||| |||||||||| |||| || |||| || || ||||||||||| Sbjct: 230 ttcggatgcttcgcctccggcgtgctccctgcatttaacttccgatgtcgtgcagatgaa 171 Query: 299 agtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 170 tgtttgcatacaaaccttgcactg 147
>gb|AC144765.19| Medicago truncatula clone mth2-35o11, complete sequence Length = 130836 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 252 gcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcat 311 ||||| || |||||||||||||| |||| || ||||||||||| || || |||||||| Sbjct: 77360 gcctcagcatgctccttgcacttcacttctgatgtggtgcagataaatgtttgcatgcac 77301 Query: 312 atcttgcactg 322 | ||||||||| Sbjct: 77300 accttgcactg 77290 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 371 cttcagcttctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcc 430 |||| ||||||||||||||||||| | |||||||| | ||| ||| |||| || || || Sbjct: 75720 cttctgcttctcgaggttcctctcgcgagccatcttagccttttgaccgttacctccacc 75661 Query: 431 catggctg 438 |||||||| Sbjct: 75660 catggctg 75653
>gb|AC137703.42| Medicago truncatula clone mth2-11d24, complete sequence Length = 127446 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 252 gcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcat 311 ||||| || |||||||||||||| |||| || ||||||||||| || || |||||||| Sbjct: 124279 gcctcagcatgctccttgcacttcacttctgatgtggtgcagataaatgtttgcatgcac 124338 Query: 312 atcttgcactg 322 | ||||||||| Sbjct: 124339 accttgcactg 124349 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 371 cttcagcttctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcc 430 |||| ||||||||||||||||||| | |||||||| | ||| ||| |||| || || || Sbjct: 125919 cttctgcttctcgaggttcctctcgcgagccatcttagccttttgaccgttacctccacc 125978 Query: 431 catggctg 438 |||||||| Sbjct: 125979 catggctg 125986
>emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 485 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgcactttgcttcagaggtggtgcagatgaaa 299 |||||||| |||||||| ||||||||| |||| || |||| || || ||||||||||| Sbjct: 240 ttcggatgattcgcctccgcgtgctccctgcatttcacttccgatgtagtgcagatgaat 181 Query: 300 gtctgcatgcatatcttgcactg 322 || ||||| || | ||||||||| Sbjct: 180 gtttgcatacaaaccttgcactg 158
>gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, complete sequence Length = 184315 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||||||||||||| Sbjct: 39801 cttctctctcttttatctctccct 39824
>emb|BX819475.1|CNS0A9PV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 258 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 240 ttcggatgcttcgcctcggcgtgctccttgca 271 ||||||||||||||||| ||||||||| |||| Sbjct: 32 ttcggatgcttcgcctccgcgtgctccctgca 1
>emb|AJ012688.1|CAR012688 Cicer arietinum mRNA for hypothetical protein, clone Can40-1 Length = 534 Score = 48.1 bits (24), Expect = 0.026 Identities = 125/158 (79%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 285 gtggtgcagatgaaagtctgcatgcatatcttgcactggatgttcatggccttcttgttg 344 ||||||||||| || || |||||||| | |||||||||||| |||||| ||||| || Sbjct: 199 gtggtgcagataaatgtttgcatgcacaccttgcactggatcgacatggctttcttatta 140 Query: 345 gcctcgagctggctccccttgccgcc---cttcagcttctcgaggttcctctccctcgcc 401 | || |||||||| || ||||| | |||| ||||||||||||||||||| | ||| Sbjct: 139 gtttcaagctggctacctttgccagcattcttctgcttctcgaggttcctctcgcgagcc 80 Query: 402 atcttggacttctgagcgttgccgccgcccatggctgt 439 ||||| | ||| || |||| || || ||||||||||| Sbjct: 79 atctttgccttttggccgttacctcctcccatggctgt 42
>gb|AC166747.4| Mus musculus chromosome 5, clone RP23-316L10, complete sequence Length = 189572 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 ttctctctcttttatctctccctctc 181 ||||||||||||| |||||||||||| Sbjct: 131578 ttctctctcttttctctctccctctc 131603
>gb|AC124727.4| Mus musculus BAC clone RP23-465O22 from chromosome 3, complete sequence Length = 181528 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccctctcc 182 |||||||||||| ||||||||||||| Sbjct: 158540 tctctctcttttctctctccctctcc 158565
>gb|AC122902.4| Mus musculus BAC clone RP23-40O6 from chromosome 3, complete sequence Length = 186144 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccctctcc 182 |||||||||||| ||||||||||||| Sbjct: 38023 tctctctcttttctctctccctctcc 38048
>gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y, complete sequence Length = 205053 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccctctcc 182 |||||||||||| ||||||||||||| Sbjct: 54500 tctctctcttttctctctccctctcc 54525
>emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chromosome 11, complete sequence Length = 242502 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccctctcc 182 |||||||||||| ||||||||||||| Sbjct: 138252 tctctctcttttctctctccctctcc 138277
>gb|DQ221706.1| Mizuhopecten yessoensis clone PYES004 microsatellite sequence Length = 627 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 |||||||||||| |||||||||||| Sbjct: 97 tctctctcttttctctctccctctc 73
>gb|AY582736.1| Cucumis melo clone BAC 31O16, complete sequence Length = 159477 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 acagcttctctctcttttatctctc 175 |||| |||||||||||||||||||| Sbjct: 116732 acaggttctctctcttttatctctc 116756
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 ||||||||| ||||||||||||||| Sbjct: 102698 tctctctctcttatctctccctctc 102674
>gb|AY737497.1| Macropus eugenii OPN1MW (OPN1MW) and CXorf2 (CXorf2) genes, complete cds Length = 92215 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cttctctctcttttatctctc 175 ||||||||||||||||||||| Sbjct: 78252 cttctctctcttttatctctc 78272
>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence Length = 204558 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tctcttttatctctccctctc 181 ||||||||||||||||||||| Sbjct: 30750 tctcttttatctctccctctc 30770
>gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, complete sequence Length = 177969 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ctctctcttttatctctccctctcc 182 ||||||||||| ||||||||||||| Sbjct: 138101 ctctctcttttctctctccctctcc 138077
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccc 177 ||||||||||||||||||||| Sbjct: 160362 tctctctcttttatctctccc 160382
>gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosome 12, complete sequence Length = 218561 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 |||||||||||| |||||||||||| Sbjct: 148068 tctctctcttttctctctccctctc 148044
>gb|AC125227.6| Mus musculus BAC clone RP23-42I13 from chromosome 7, complete sequence Length = 211209 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 |||||||||||| |||||||||||| Sbjct: 44611 tctctctcttttctctctccctctc 44587
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 ||||||||||||||||||| ||||| Sbjct: 16685359 tctctctcttttatctctcactctc 16685335
>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence Length = 140426 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 ||||||||| ||||||||||||||| Sbjct: 102698 tctctctctcttatctctccctctc 102674
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 tgccgcccttcagcttctcga 384 ||||||||||||||||||||| Sbjct: 2620650 tgccgcccttcagcttctcga 2620630
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 ||||||||||||||||||| ||||| Sbjct: 34053 tctctctcttttatctctcactctc 34029
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 ||||||||||||||||||| ||||| Sbjct: 93498 tctctctcttttatctctcactctc 93474
>gb|AC102385.23| Mus musculus chromosome 1, clone RP24-338N17, complete sequence Length = 119980 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 ttctctctcttttatctctcc 176 ||||||||||||||||||||| Sbjct: 97173 ttctctctcttttatctctcc 97153
>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone F19F18 (ESSA project) Length = 91740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccc 177 ||||||||||||||||||||| Sbjct: 36940 tctctctcttttatctctccc 36960
>emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chromosome X, complete sequence Length = 189295 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctctc 181 |||||||||||| |||||||||||| Sbjct: 26221 tctctctcttttctctctccctctc 26197
>emb|AL645975.9| Mouse DNA sequence from clone RP23-154F12 on chromosome 11, complete sequence Length = 44496 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tctctctcttttatctctccctctc 181 |||||||||||| |||||||||||| Sbjct: 25061 tctctctcttttctctctccctctc 25085
>ref|XM_511542.1| PREDICTED: Pan troglodytes similar to Histone deacetylase 5 (HD5) (Antigen NY-CO-9) (LOC454721), mRNA Length = 4995 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 4184 cccatggctgtggattcctcggcg 4161
>ref|XM_549966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||| ||||||||| Sbjct: 201 cttctctctcttttctctctccct 178
>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence Length = 177843 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 atgaaagtctgcatgcatat 313 |||||||||||||||||||| Sbjct: 68483 atgaaagtctgcatgcatat 68502
>gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, complete sequence Length = 234224 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tttggcagatatcactgctt 208 |||||||||||||||||||| Sbjct: 157677 tttggcagatatcactgctt 157658
>ref|XM_365780.1| Magnaporthe grisea 70-15 hypothetical protein (MG02482.4) partial mRNA Length = 2523 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 403 tcttggacttctgagcgttgccgccgcc 430 |||||||||||| | ||||||||||||| Sbjct: 1666 tcttggacttcttaccgttgccgccgcc 1639
>gb|BC051824.1| Homo sapiens histone deacetylase 5, transcript variant 1, mRNA (cDNA clone MGC:60081 IMAGE:6043491), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 2733 cccatggctgtggattcctcggcg 2710
>ref|NM_001015053.1| Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 3, mRNA Length = 5327 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 2857 cccatggctgtggattcctcggcg 2834
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cgagctggctccccttgccg 368 |||||||||||||||||||| Sbjct: 513144 cgagctggctccccttgccg 513125
>ref|NM_005474.4| Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 1, mRNA Length = 5324 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 2854 cccatggctgtggattcctcggcg 2831
>gb|AC145589.3| Mus musculus BAC clone RP24-174M10 from chromosome Y, complete sequence Length = 152506 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctct 180 |||||||||||| ||||||||||| Sbjct: 139370 tctctctcttttttctctccctct 139347
>gb|AC147621.3| Mus musculus BAC clone RP24-315M14 from chromosome Y, complete sequence Length = 166529 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tctctctcttttatctctccctct 180 |||||||||||| ||||||||||| Sbjct: 32196 tctctctcttttttctctccctct 32173
>ref|XM_455071.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E24871g predicted mRNA Length = 675 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 gatttggcagatatcactgc 206 |||||||||||||||||||| Sbjct: 400 gatttggcagatatcactgc 419
>gb|AC091465.7| Mus musculus chromosome 1, clone RP23-221K1, complete sequence Length = 199109 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tttggcagatatcactgctt 208 |||||||||||||||||||| Sbjct: 32698 tttggcagatatcactgctt 32679
>gb|BC038423.1| Homo sapiens, Similar to histone deacetylase 5, clone IMAGE:4933587, mRNA Length = 3640 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 1136 cccatggctgtggattcctcggcg 1113
>emb|AL157832.14| Human DNA sequence from clone RP11-109A6 on chromosome 10 Contains the 3' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase and three novel genes, complete sequence Length = 130192 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggcacacaaccaaagcagct 65 |||||||||||||||||||| Sbjct: 92240 ggcacacaaccaaagcagct 92221
>emb|AL031279.1|HS163O16 Human DNA sequence from clone RP1-163O16 on chromosome 1p35.1-36.13 Contains CA repeat, STS, complete sequence Length = 135628 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tctctctcttttatctctcc 176 |||||||||||||||||||| Sbjct: 122878 tctctctcttttatctctcc 122859
>emb|CR859595.1| Pongo pygmaeus mRNA; cDNA DKFZp459O115 (from clone DKFZp459O115) Length = 3603 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 2667 cccatggctgtggattcctcggcg 2644
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 gatttggcagatatcactgc 206 |||||||||||||||||||| Sbjct: 2202301 gatttggcagatatcactgc 2202320
>emb|BX546466.6| Zebrafish DNA sequence from clone DKEY-43N10 in linkage group 23, complete sequence Length = 109069 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ctctctcttttatctctccctctc 181 |||||||||| ||||||||||||| Sbjct: 10561 ctctctctttcatctctccctctc 10584
>emb|BX323580.6| Zebrafish DNA sequence from clone DKEY-49J14 in linkage group 6, complete sequence Length = 98167 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||||| ||||||| Sbjct: 57935 cttctctctcttttatttctccct 57958
>dbj|AK075095.1| Homo sapiens cDNA FLJ90614 fis, clone PLACE1002080, highly similar to Homo sapiens antigen NY-CO-9 (NY-CO-9) mRNA Length = 2601 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 1502 cccatggctgtggattcctcggcg 1479
>dbj|AK056146.1| Homo sapiens cDNA FLJ31584 fis, clone NT2RI2002153 Length = 2713 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggcacacaaccaaagcagct 65 |||||||||||||||||||| Sbjct: 1126 ggcacacaaccaaagcagct 1107
>dbj|AK027734.1| Homo sapiens cDNA FLJ14828 fis, clone OVARC1000915, highly similar to Homo sapiens histone deacetylase 5 mRNA Length = 1745 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 672 cccatggctgtggattcctcggcg 649
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ctttgcttcagaggtggtgc 291 |||||||||||||||||||| Sbjct: 2515175 ctttgcttcagaggtggtgc 2515156
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||| ||||||||| Sbjct: 1265985 cttctctctcttttctctctccct 1265962
>gb|AY859768.1| Lota lota clone Llo15 microsatellite sequence Length = 677 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ctctctcttttatctctccctctc 181 ||||||||||| |||||||||||| Sbjct: 110 ctctctcttttctctctccctctc 87
>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone BACR02B16, complete sequence Length = 186938 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ctctctcttttatctctccctctc 181 ||||||||||| |||||||||||| Sbjct: 127771 ctctctcttttttctctccctctc 127794
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 tggccttcttgttggcctcgagct 354 |||||||||| ||||||||||||| Sbjct: 404808 tggccttcttcttggcctcgagct 404785
>gb|AC099799.6| Homo sapiens BAC clone RP11-637F15 from 2, complete sequence Length = 85432 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 156 ttctctctcttttatctctccctctccgtctg 187 ||||||||| ||| ||||||||||||| |||| Sbjct: 35347 ttctctctcctttttctctccctctccctctg 35316
>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence Length = 96974 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 156 ttctctctcttttatctctccctctccgtctg 187 ||||||||| ||| ||||||||||||| |||| Sbjct: 74833 ttctctctcctttttctctccctctccctctg 74802
>dbj|AB177853.1| Homo sapiens mRNA for KIAA0600 splice variant 1 Length = 2233 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 1306 cccatggctgtggattcctcggcg 1283
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||| ||||||||| Sbjct: 59639 cttctctctcttttctctctccct 59616
>emb|BX004984.6| Zebrafish DNA sequence from clone DKEY-3N4, complete sequence Length = 264738 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||||| ||||||| Sbjct: 11758 cttctctctcttttatttctccct 11735
>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete sequence Length = 185237 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tgcagatgaaagtctgcatg 308 |||||||||||||||||||| Sbjct: 134939 tgcagatgaaagtctgcatg 134920
>emb|AL807381.6| Zebrafish DNA sequence from clone CH211-222N24, complete sequence Length = 230718 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cttctctctcttttatctctccct 178 |||||||||||||||| ||||||| Sbjct: 214364 cttctctctcttttatttctccct 214341
>dbj|AK110188.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-A02, full insert sequence Length = 3343 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gcgttgccgccgcccatggc 436 |||||||||||||||||||| Sbjct: 2527 gcgttgccgccgcccatggc 2508
>emb|BX293547.6| Zebrafish DNA sequence from clone CH211-142E24 in linkage group 20, complete sequence Length = 157145 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tcttttatctctccctctcc 182 |||||||||||||||||||| Sbjct: 142876 tcttttatctctccctctcc 142857
>gb|AF132608.1|AF132608 Homo sapiens histone deacetylase 5 mRNA, complete cds Length = 3369 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 2522 cccatggctgtggattcctcggcg 2499
>gb|AF039691.1|AF039691 Homo sapiens antigen NY-CO-9 (NY-CO-9) mRNA, partial cds Length = 2885 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 1959 cccatggctgtggattcctcggcg 1936
>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete sequence Length = 262557 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ctctctcttttatctctccctctc 181 ||||||||||| |||||||||||| Sbjct: 39449 ctctctcttttttctctccctctc 39472
>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence Length = 150641 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ctctctcttttatctctccctctc 181 |||||||||| ||||||||||||| Sbjct: 139486 ctctctctttcatctctccctctc 139509
>emb|AJ300486.1|LGE300486 Leishmania gerbilli internal transcribed spacer 1,(ITS1) 5.8S rRNA gene and internal transcribed spacer 2 (ITS2), strain MRHO/UZ/87/KD-87555 Length = 1061 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 gcttctctctcttttatctctccc 177 ||||||||||||||| |||||||| Sbjct: 746 gcttctctctcttttttctctccc 723
>dbj|AB011172.2| Homo sapiens mRNA for KIAA0600 protein, partial cds Length = 5040 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 cccatggctgttgattcctcggcg 452 ||||||||||| |||||||||||| Sbjct: 2571 cccatggctgtggattcctcggcg 2548 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,361,612 Number of Sequences: 3902068 Number of extensions: 4361612 Number of successful extensions: 95765 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 95212 Number of HSP's gapped (non-prelim): 546 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)