ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15n22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106093.1| Zea mays PCO112665 mRNA sequence 331 2e-87
2dbj|AK103505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
3ref|XM_493923.1| Oryza sativa (japonica cultivar-group), predic... 232 1e-57
4gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 190 4e-45
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
6dbj|AK104502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
7dbj|AK060882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
8emb|AJ011589.1|PSA011589 Pisum sativum mRNA for bifunctional 5,1... 76 2e-10
9gb|AF030516.1|AF030516 Pisum sativum 5,10-methylenetetrahydrofol... 76 2e-10
10gb|AF439724.1|AF439724 Zea mays methylenetetrahydrofolate dehydr... 56 1e-04
11gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 54 6e-04
12gb|AY486855.1| Hevea brasiliensis clone mHbCIRa36 microsatellite... 52 0.002
13ref|NM_001031360.1| Gallus gallus methylenetetrahydrofolate dehy... 48 0.035
14gb|AC120002.24| Mus musculus chromosome 12, clone RP24-147D14, c... 48 0.035
15ref|NM_138745.1| Mus musculus methylenetetrahydrofolate dehydrog... 48 0.035
16gb|AC124453.3| Mus musculus BAC clone RP24-225A16 from chromosom... 48 0.035
17gb|BC008523.1| Mus musculus methylenetetrahydrofolate dehydrogen... 48 0.035
18gb|BC013563.1| Mus musculus methylenetetrahydrofolate dehydrogen... 48 0.035
19emb|AJ720179.1| Gallus gallus mRNA for hypothetical protein, clo... 48 0.035
20gb|AF364583.1|F364580S04 Mus musculus C1-tetrahydrofolate syntha... 48 0.035
21gb|AF364579.1| Mus musculus C1-tetrahydrofolate synthase (Dcs) m... 48 0.035
22dbj|AK129012.1| Mus musculus cDNA fis, clone TRACH3032065, highl... 48 0.035
23dbj|AK133848.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 48 0.035
24dbj|AK159812.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 48 0.035
25dbj|AK165951.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 48 0.035
26dbj|AK088700.1| Mus musculus 2 days neonate thymus thymic cells ... 48 0.035
27dbj|AK042958.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 48 0.035
28dbj|AK213959.1| Mus musculus cDNA, clone:Y2G0130B22, strand:minu... 48 0.035
29gb|AF439726.1|AF439726 Zea mays methylenetetrahydrofolate dehydr... 46 0.14
30gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 46 0.14
31gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 46 0.14
32ref|XM_547891.2| PREDICTED: Canis familiaris similar to papilin ... 44 0.55
33dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 2.2
34ref|NM_022508.1| Rattus norvegicus methylenetetrahydrofolate deh... 40 8.6
35gb|BC082827.1| Xenopus laevis kinesine, mRNA (cDNA clone MGC:800... 40 8.6
36emb|AJ249548.1|EMU249548 Echinococcus multilocularis Tub-1 gene ... 40 8.6
37ref|XM_539316.2| PREDICTED: Canis familiaris similar to methylen... 40 8.6
38gb|BC042218.1| Xenopus laevis similar to kinesin-like 1, mRNA (c... 40 8.6
39ref|XM_970845.1| PREDICTED: Tribolium castaneum similar to CG406... 40 8.6
40ref|XM_970804.1| PREDICTED: Tribolium castaneum similar to CG406... 40 8.6
41ref|XM_970768.1| PREDICTED: Tribolium castaneum similar to CG406... 40 8.6
42ref|XM_961261.1| PREDICTED: Tribolium castaneum similar to CG406... 40 8.6
43emb|X71864.1|XLKLP X.laevis mRNA for kinesin-like protein 40 8.6
44emb|X54002.1|XLKINESIN X.laevis mRNA for kinesine 40 8.6
45gb|BC089800.1| Rattus norvegicus methylenetetrahydrofolate dehyd... 40 8.6
46emb|AL022103.1|SPBC2G2 S.pombe chromosome II cosmid c2G2 40 8.6
47dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.6
48gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell... 40 8.6
49gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.6
50ref|NM_001022356.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.6
51gb|AC079028.11|AC079028 Arabidopsis thaliana chromosome 1 BAC T3... 40 8.6
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
53gb|AC035249.7|AC035249 Arabidopsis thaliana chromosome 1 BAC F8D... 40 8.6
54gb|AC068901.8|AC068901 Arabidopsis thaliana chromosome 1 BAC F1O... 40 8.6
55dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
56dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
57dbj|AK208410.1| Mus musculus cDNA, clone:Y2G0111C21, strand:plus... 40 8.6
58dbj|AK068349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
59gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 8.6
60emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on ch... 40 8.6
61gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 8.6
62gb|AC140934.1| Gallus gallus BAC clone TAM31-90J8 from chromosom... 40 8.6
63gb|J05519.1|RATC1H4SY Rat C1-tetrahydrofolate synthase mRNA, com... 40 8.6 
>gb|AY106093.1| Zea mays PCO112665 mRNA sequence
          Length = 1087

 Score =  331 bits (167), Expect = 2e-87
 Identities = 383/455 (84%)
 Strand = Plus / Minus

                                                                       
Query: 178 tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
           ||||||||||||||||||| ||||||||| ||||| || ||||||||||| || ||||||
Sbjct: 879 tccaccgtgttcttcagcagcattgccaccgtcattgggccaacgcctccgggaaccgga 820

                                                                       
Query: 238 gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
           |||||||  || || |||||||| ||| | ||||||||||||||||| ||||||| ||||
Sbjct: 819 gtcaggtacccagcaaccttgctcgccgctgcgaaatccacatcgccgacgagccggtac 760

                                                                       
Query: 298 ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
           |||||||||| ||||||||| ||||||||||| || |||||||||||||| || || |||
Sbjct: 759 ccggacttccgggtagggtcatcgatggagttcgtcccgacatcgatgaccgcagcacct 700

                                                                       
Query: 358 ggtttgatccagtctcccttgatcatcatggcctggcctgctgctgcaatgacaatgtct 417
           || ||||||||||| || ||||||||||| ||||| || ||||| || ||||| ||||| 
Sbjct: 699 ggcttgatccagtcacctttgatcatcatagcctgcccagctgccgcgatgactatgtca 640

                                                                       
Query: 418 gcttgacagacaatcgtttcgggatttggcgtccgtgaatgcacgatcgacacggtagcg 477
           ||||  |  |||||  |||| ||||  || ||||| || ||||| |  || ||||| || 
Sbjct: 639 gcttcgcgtacaatgctttcaggatcaggggtccgcgagtgcacaacagatacggtcgca 580

                                                                       
Query: 478 tctgctttcagaaggagaagggatactggtaaacccacgatgttgctacgcccaaccaca 537
           ||||| ||||||||||| |||||||| ||||  || ||||||||||| || |||||||||
Sbjct: 579 tctgccttcagaaggagcagggatacaggtagcccgacgatgttgctgcgaccaaccaca 520

                                                                       
Query: 538 actgcgtgctttccttttacagtgactccactgcgtgacaggagctccatgcaacccttt 597
           |||||  |||| ||||| ||||||||||| || | ||||| |||||||||||| ||||||
Sbjct: 519 actgcccgcttacctttaacagtgactccgctccttgacaagagctccatgcaccccttt 460

                                              
Query: 598 ggggtacaaggtaggaacagtggatttctgccttt 632
           || ||||| |||| ||||||||| | |||||||||
Sbjct: 459 ggcgtacatggtacgaacagtggctctctgccttt 425
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>dbj|AK103505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131D02, full
           insert sequence
          Length = 1118

 Score =  291 bits (147), Expect = 1e-75
 Identities = 378/455 (83%)
 Strand = Plus / Minus

                                                                       
Query: 178 tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
           ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 964 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 905

                                                                       
Query: 238 gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
           ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 904 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 845

                                                                       
Query: 298 ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
           || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 844 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 785

                                                                       
Query: 358 ggtttgatccagtctcccttgatcatcatggcctggcctgctgctgcaatgacaatgtct 417
           ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 784 ggtttgatccagtctcctttgatcatcatagcctggccagccgctgcaatgacaatgtct 725

                                                                       
Query: 418 gcttgacagacaatcgtttcgggatttggcgtccgtgaatgcacgatcgacacggtagcg 477
           |||| || ||||||  |||| || ||||| ||||| || || || || || ||||| || 
Sbjct: 724 gcttcacggacaatactttcagggtttggggtccgggagtgaacaatggatacggtcgca 665

                                                                       
Query: 478 tctgctttcagaaggagaagggatactggtaaacccacgatgttgctacgcccaaccaca 537
           || || |||||||| || |||||||| ||||  || || |||||||| || |||||||| 
Sbjct: 664 tccgccttcagaagaagcagggatacaggtagcccgacaatgttgctgcggccaaccacg 605

                                                                       
Query: 538 actgcgtgctttccttttacagtgactccactgcgtgacaggagctccatgcaacccttt 597
           || ||  |||| || || |  || ||||| || ||||  |||||||||||||| ||||| 
Sbjct: 604 accgctcgcttcccattgatggtaactccgctccgtgttaggagctccatgcatcccttc 545

                                              
Query: 598 ggggtacaaggtaggaacagtggatttctgccttt 632
           || || || |||||||||||||| | |||||||||
Sbjct: 544 ggcgtgcatggtaggaacagtgggtctctgccttt 510
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>ref|XM_493923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score =  232 bits (117), Expect = 1e-57
 Identities = 371/455 (81%), Gaps = 3/455 (0%)
 Strand = Plus / Minus

                                                                       
Query: 178 tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
           ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 848 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 789

                                                                       
Query: 238 gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
           ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 788 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 729

                                                                       
Query: 298 ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
           || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 728 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 669

                                                                       
Query: 358 ggtttgatccagtctcccttgatcatcatggcctggcctgctgctgcaatgacaatgtct 417
           |||||||||||||     |  | |||||| |||||||| || ||||||||||||||||||
Sbjct: 668 ggtttgatccagt---aatgtaccatcatagcctggccagccgctgcaatgacaatgtct 612

                                                                       
Query: 418 gcttgacagacaatcgtttcgggatttggcgtccgtgaatgcacgatcgacacggtagcg 477
           |||| || ||||||  |||| || ||||| ||||| || || || || || ||||| || 
Sbjct: 611 gcttcacggacaatactttcagggtttggggtccgggagtgaacaatggatacggtcgca 552

                                                                       
Query: 478 tctgctttcagaaggagaagggatactggtaaacccacgatgttgctacgcccaaccaca 537
           || || |||||||| || |||||||| ||||  || || |||||||| || |||||||| 
Sbjct: 551 tccgccttcagaagaagcagggatacaggtagcccgacaatgttgctgcggccaaccacg 492

                                                                       
Query: 538 actgcgtgctttccttttacagtgactccactgcgtgacaggagctccatgcaacccttt 597
           || ||  |||| || || |  || ||||| || ||||  |||||||||||||| ||||| 
Sbjct: 491 accgctcgcttcccattgatggtaactccgctccgtgttaggagctccatgcatcccttc 432

                                              
Query: 598 ggggtacaaggtaggaacagtggatttctgccttt 632
           || || || |||||||||||||| | |||||||||
Sbjct: 431 ggcgtgcatggtaggaacagtgggtctctgccttt 397
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>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
             complete sequence
          Length = 164898

 Score =  190 bits (96), Expect = 4e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                         
Query: 178   tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
             ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 62143 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 62084

                                                                         
Query: 238   gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
             ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 62083 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 62024

                                                                         
Query: 298   ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
             || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 62023 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 61964

                                     
Query: 358   ggtttgatccagtctcccttgatc 381
             ||||||||||||||||| ||||||
Sbjct: 61963 ggtttgatccagtctcctttgatc 61940



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 127/156 (81%)
 Strand = Plus / Minus

                                                                         
Query: 381   catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 440
             |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 61858 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 61799

                                                                         
Query: 441   atttggcgtccgtgaatgcacgatcgacacggtagcgtctgctttcagaaggagaaggga 500
              ||||| ||||| || || || || || ||||| || || || |||||||| || |||||
Sbjct: 61798 gtttggggtccgggagtgaacaatggatacggtcgcatccgccttcagaagaagcaggga 61739

                                                 
Query: 501   tactggtaaacccacgatgttgctacgcccaaccac 536
             ||| ||||  || || |||||||| || ||||||||
Sbjct: 61738 tacaggtagcccgacaatgttgctgcggccaaccac 61703
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  190 bits (96), Expect = 4e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                           
Query: 178     tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
               ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 2867532 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 2867473

                                                                           
Query: 238     gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
               ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 2867472 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 2867413

                                                                           
Query: 298     ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
               || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 2867412 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 2867353

                                       
Query: 358     ggtttgatccagtctcccttgatc 381
               ||||||||||||||||| ||||||
Sbjct: 2867352 ggtttgatccagtctcctttgatc 2867329



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 127/156 (81%)
 Strand = Plus / Minus

                                                                           
Query: 381     catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 440
               |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 2867247 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 2867188

                                                                           
Query: 441     atttggcgtccgtgaatgcacgatcgacacggtagcgtctgctttcagaaggagaaggga 500
                ||||| ||||| || || || || || ||||| || || || |||||||| || |||||
Sbjct: 2867187 gtttggggtccgggagtgaacaatggatacggtcgcatccgccttcagaagaagcaggga 2867128

                                                   
Query: 501     tactggtaaacccacgatgttgctacgcccaaccac 536
               ||| ||||  || || |||||||| || ||||||||
Sbjct: 2867127 tacaggtagcccgacaatgttgctgcggccaaccac 2867092
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>dbj|AK104502.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F01, full
            insert sequence
          Length = 1209

 Score =  190 bits (96), Expect = 4e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
            ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 1055 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 996

                                                                        
Query: 238  gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
            ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 995  gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 936

                                                                        
Query: 298  ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
            || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 935  cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 876

                                    
Query: 358  ggtttgatccagtctcccttgatc 381
            ||||||||||||||||| ||||||
Sbjct: 875  ggtttgatccagtctcctttgatc 852



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 127/156 (81%)
 Strand = Plus / Minus

                                                                       
Query: 381 catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 440
           |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 770 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 711

                                                                       
Query: 441 atttggcgtccgtgaatgcacgatcgacacggtagcgtctgctttcagaaggagaaggga 500
            ||||| ||||| || || || || || ||||| || || || |||||||| || |||||
Sbjct: 710 gtttggggtccgggagtgaacaatggatacggtcgcatccgccttcagaagaagcaggga 651

                                               
Query: 501 tactggtaaacccacgatgttgctacgcccaaccac 536
           ||| ||||  || || |||||||| || ||||||||
Sbjct: 650 tacaggtagcccgacaatgttgctgcggccaaccac 615
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>dbj|AK060882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A12, full
            insert sequence
          Length = 1209

 Score =  190 bits (96), Expect = 4e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 237
            ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 1055 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 996

                                                                        
Query: 238  gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 297
            ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 995  gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 936

                                                                        
Query: 298  ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 357
            || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 935  cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 876

                                    
Query: 358  ggtttgatccagtctcccttgatc 381
            ||||||||||||||||| ||||||
Sbjct: 875  ggtttgatccagtctcctttgatc 852



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 127/156 (81%)
 Strand = Plus / Minus

                                                                       
Query: 381 catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 440
           |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 770 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 711

                                                                       
Query: 441 atttggcgtccgtgaatgcacgatcgacacggtagcgtctgctttcagaaggagaaggga 500
            ||||| ||||| || || || || || ||||| || || || |||||||| || |||||
Sbjct: 710 gtttggggtccgggagtgaacaatggatacggtcgcatccgccttcagaagaagcaggga 651

                                               
Query: 501 tactggtaaacccacgatgttgctacgcccaaccac 536
           ||| ||||  || || |||||||| || ||||||||
Sbjct: 650 tacaggtagcccgacaatgttgctgcggccaaccac 615
to top
>emb|AJ011589.1|PSA011589 Pisum sativum mRNA for bifunctional 5,10-methylene-
           tetrahydrofolate dehydrogenase and
           5,10-methenyltetrahydrofolate cyclohydrolase protein
          Length = 1219

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 tttgtaccgacatcgatgactgccgcgcctggtttgatccagtctcccttgatcatcatg 387
           ||||| || ||||| || ||||| || |||||||| ||||||  ||||||||||||| | 
Sbjct: 768 tttgtgccaacatctatcactgcagctcctggttttatccagcttcccttgatcatcttt 709

                                             
Query: 388 gcctggcctgctgctgcaatgacaatgtctgctt 421
           ||||| |||||||||||||| ||||| |||||||
Sbjct: 708 gcctgtcctgctgctgcaataacaatatctgctt 675
to top
>gb|AF030516.1|AF030516 Pisum sativum 5,10-methylenetetrahydrofolate
           dehydrogenase-5,10-methenyltetrahydrofolate
           cyclohydrolase mRNA, complete cds
          Length = 1219

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 tttgtaccgacatcgatgactgccgcgcctggtttgatccagtctcccttgatcatcatg 387
           ||||| || ||||| || ||||| || |||||||| ||||||  ||||||||||||| | 
Sbjct: 768 tttgtgccaacatctatcactgcagctcctggttttatccagcttcccttgatcatcttt 709

                                             
Query: 388 gcctggcctgctgctgcaatgacaatgtctgctt 421
           ||||| |||||||||||||| ||||| |||||||
Sbjct: 708 gcctgtcctgctgctgcaataacaatatctgctt 675
to top
>gb|AF439724.1|AF439724 Zea mays methylenetetrahydrofolate
           dehydrogenase/methylenetetrahydrofolate cylcohydrolase
           isoform 1 mRNA, partial cds
          Length = 480

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 346 actgccgcgcctggtttgatccagtctcccttgatcatcatggcctggcctgctgctgca 405
           ||||| ||||| ||||||||||||   || ||||||||||| ||||| ||||| || |||
Sbjct: 338 actgcagcgccaggtttgatccagctgcctttgatcatcatagcctgtcctgcggcagca 279

                           
Query: 406 atgacaatgtctgctt 421
           || | |||||||||||
Sbjct: 278 ataataatgtctgctt 263
to top
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 195    caacattgccacggtcatcggcccaacgcctccagggac 233
              ||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 821072 caacattgcaacggtcattggcccaacgccaccagggac 821110
to top
>gb|AY486855.1| Hevea brasiliensis clone mHbCIRa36 microsatellite sequence
          Length = 603

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 478 tctgctttcagaaggagaagggatactggtaaacccacgatgttgctacgcccaaccaca 537
           |||||||||||||| || || || |||||||| || || ||||||||||| ||||| |||
Sbjct: 330 tctgctttcagaagcagcagtgacactggtaatccaactatgttgctacggccaacaaca 271

             
Query: 538 ac 539
           ||
Sbjct: 270 ac 269
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>ref|NM_001031360.1| Gallus gallus methylenetetrahydrofolate dehydrogenase (NADP+
            dependent) 2, methenyltetrahydrofolate cyclohydrolase
            (MTHFD2), mRNA
          Length = 1703

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 184  gtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccggagt 239
            |||||||||| || ||| || || ||||| |||||||| || ||||||||||||||
Sbjct: 1002 gtgttcttcatcagcatggcaactgtcatgggcccaactcccccagggaccggagt 947
to top
>gb|AC120002.24| Mus musculus chromosome 12, clone RP24-147D14, complete sequence
          Length = 179305

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 198    cattgccacggtcatcggcccaacgcctccagggac 233
              ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 126161 cattgccacggtcatgggccccacgccaccagggac 126126
to top
>ref|NM_138745.1| Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase (Mthfd1), mRNA
          Length = 3159

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 942 cattgccacggtcatgggccccacgccaccagggac 907
to top
>gb|AC124453.3| Mus musculus BAC clone RP24-225A16 from chromosome 12, complete
             sequence
          Length = 184665

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 198   cattgccacggtcatcggcccaacgcctccagggac 233
             ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 10815 cattgccacggtcatgggccccacgccaccagggac 10780
to top
>gb|BC008523.1| Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, mRNA (cDNA clone
           MGC:6417 IMAGE:3590449), complete cds
          Length = 3159

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 942 cattgccacggtcatgggccccacgccaccagggac 907
to top
>gb|BC013563.1| Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, mRNA (cDNA clone
           IMAGE:3590876)
          Length = 2511

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 255 cattgccacggtcatgggccccacgccaccagggac 220
to top
>emb|AJ720179.1| Gallus gallus mRNA for hypothetical protein, clone 12b8
          Length = 1703

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 184  gtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccggagt 239
            |||||||||| || ||| || || ||||| |||||||| || ||||||||||||||
Sbjct: 1002 gtgttcttcatcagcatggcaactgtcatgggcccaactcccccagggaccggagt 947
to top
>gb|AF364583.1|F364580S04 Mus musculus C1-tetrahydrofolate synthase (Dcs) gene, exons 9, 10,
            and 11
          Length = 2551

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 198  cattgccacggtcatcggcccaacgcctccagggac 233
            ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1600 cattgccacggtcatgggccccacgccaccagggac 1565
to top
>gb|AF364579.1| Mus musculus C1-tetrahydrofolate synthase (Dcs) mRNA, complete cds
          Length = 2865

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 899 cattgccacggtcatgggccccacgccaccagggac 864
to top
>dbj|AK129012.1| Mus musculus cDNA fis, clone TRACH3032065, highly similar to
            C-1-tetrahydrofolate synthase, cytoplasmic
          Length = 3240

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 198  cattgccacggtcatcggcccaacgcctccagggac 233
            ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1052 cattgccacggtcatgggccccacgccaccagggac 1017
to top
>dbj|AK133848.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730448C09
           product:methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, full insert sequence
          Length = 3042

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 853 cattgccacggtcatgggccccacgccaccagggac 818
to top
>dbj|AK159812.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420031N06
           product:methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, full insert sequence
          Length = 3118

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 930 cattgccacggtcatgggccccacgccaccagggac 895
to top
>dbj|AK165951.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730023A08
           product:methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, full insert sequence
          Length = 3143

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 950 cattgccacggtcatgggccccacgccaccagggac 915
to top
>dbj|AK088700.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430024A07
           product:C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC
           (C1-THF SYNTHASE) [INCLUDES: METHYLENETETRAHYDROFOLATE
           DEHYDROGENASE (EC 1.5.1.5); METHENYLTETRAHYDROFOLATE
           CYCLOHYDROLASE (EC 3.5.4.9); FORMYLTETRAHYDROFOLATE
           SYNTHETASE (EC 6.3.4.3)] homolog [Rattus norvegicus],
           full insert sequence
          Length = 3103

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 915 cattgccacggtcatgggccccacgccaccagggac 880
to top
>dbj|AK042958.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730043L04
           product:C1-tetrahydrofolate synthase homolog [Rattus
           norvegicus], full insert sequence
          Length = 2302

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 954 cattgccacggtcatgggccccacgccaccagggac 919
to top
>dbj|AK213959.1| Mus musculus cDNA, clone:Y2G0130B22, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000021443, based on BLAT search
          Length = 385

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 88  cattgccacggtcatgggccccacgccaccagggac 53
to top
>gb|AF439726.1|AF439726 Zea mays methylenetetrahydrofolate
           dehydrogenase/methylenetetrahydrofolate cylcohydrolase
           isoform 3 mRNA, partial cds
          Length = 480

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 484 ttcagaaggagaagggatactggtaaacccacgatgttgctacgcccaaccacaactgc 542
           ||||||||||| || || |||||||| || || ||||| || || ||||||||||||||
Sbjct: 200 ttcagaaggagcagagacactggtaatccaacaatgttacttcgaccaaccacaactgc 142
to top
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 196    aacattgccacggtcatcggcccaacgcctccagg 230
              ||||||||||| |||||||| |||||||| |||||
Sbjct: 884199 aacattgccactgtcatcggaccaacgccaccagg 884165
to top
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 195    caacattgccacggtcatcggcccaacgcctccagggac 233
              ||||||||| |||||||| ||||||||||| || |||||
Sbjct: 640114 caacattgcaacggtcattggcccaacgccaccggggac 640152
to top
>ref|XM_547891.2| PREDICTED: Canis familiaris similar to papilin (LOC490769), mRNA
          Length = 3756

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 383  tcatggcctggcctgctgctgc 404
            ||||||||||||||||||||||
Sbjct: 2669 tcatggcctggcctgctgctgc 2648
to top
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 372    tcccttgatcatcatggcctg 392
              |||||||||||||||||||||
Sbjct: 454291 tcccttgatcatcatggcctg 454311
to top
>ref|NM_022508.1| Rattus norvegicus methylenetetrahydrofolate dehydrogenase (NADP+
            dependent), methenyltetrahydrofolate cyclohydrolase,
            formyltetrahydrofolate synthase (Mthfd1), mRNA
          Length = 3332

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 198  cattgccacggtcatcggcccaacgcctccagggac 233
            ||||||||||||||| ||||| ||||| || |||||
Sbjct: 1152 cattgccacggtcatgggccccacgccaccggggac 1117
to top
>gb|BC082827.1| Xenopus laevis kinesine, mRNA (cDNA clone MGC:80002 IMAGE:5049026),
            complete cds
          Length = 3613

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ggtcgtcgatggagtttgta 333
            ||||||||||||||||||||
Sbjct: 1807 ggtcgtcgatggagtttgta 1788
to top
>emb|AJ249548.1|EMU249548 Echinococcus multilocularis Tub-1 gene for beta-tubulin, exons 1-3
          Length = 5157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 27  gttctcgaaattgcgtaaag 46
           ||||||||||||||||||||
Sbjct: 457 gttctcgaaattgcgtaaag 438
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>ref|XM_539316.2| PREDICTED: Canis familiaris similar to methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 2-like (LOC482197), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 184 gtgttcttcagcaacattgccacggtcatcggcccaacgcctcc 227
           ||||||||||| | ||||||||| ||||| || || ||||||||
Sbjct: 902 gtgttcttcagaagcattgccaccgtcatgggtcccacgcctcc 859
to top
>gb|BC042218.1| Xenopus laevis similar to kinesin-like 1, mRNA (cDNA clone MGC:52588
            IMAGE:5570491), complete cds
          Length = 3684

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ggtcgtcgatggagtttgta 333
            ||||||||||||||||||||
Sbjct: 1864 ggtcgtcgatggagtttgta 1845
to top
>ref|XM_970845.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
           transcript variant 5 (LOC656820), mRNA
          Length = 2929

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 196 aacattgccacggtcatcggcccaacgcctccagggaccggagt 239
           ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 888 aacattgccactgtcatggggcctacacctccagggactggagt 845
to top
>ref|XM_970804.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
           transcript variant 4 (LOC656820), mRNA
          Length = 3026

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 196 aacattgccacggtcatcggcccaacgcctccagggaccggagt 239
           ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 985 aacattgccactgtcatggggcctacacctccagggactggagt 942
to top
>ref|XM_970768.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
           transcript variant 3 (LOC656820), mRNA
          Length = 2213

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 196 aacattgccacggtcatcggcccaacgcctccagggaccggagt 239
           ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 172 aacattgccactgtcatggggcctacacctccagggactggagt 129
to top
>ref|XM_961261.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
            transcript variant 1 (LOC656820), mRNA
          Length = 3041

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 196  aacattgccacggtcatcggcccaacgcctccagggaccggagt 239
            ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 1000 aacattgccactgtcatggggcctacacctccagggactggagt 957
to top
>emb|X71864.1|XLKLP X.laevis mRNA for kinesin-like protein
          Length = 3420

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ggtcgtcgatggagtttgta 333
            ||||||||||||||||||||
Sbjct: 1844 ggtcgtcgatggagtttgta 1825
to top
>emb|X54002.1|XLKINESIN X.laevis mRNA for kinesine
          Length = 3651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ggtcgtcgatggagtttgta 333
            ||||||||||||||||||||
Sbjct: 1880 ggtcgtcgatggagtttgta 1861
to top
>gb|BC089800.1| Rattus norvegicus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, mRNA (cDNA clone
           MGC:108690 IMAGE:7323085), complete cds
          Length = 3089

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| ||||| || |||||
Sbjct: 866 cattgccacggtcatgggccccacgccaccggggac 831
to top
>emb|AL022103.1|SPBC2G2 S.pombe chromosome II cosmid c2G2
          Length = 36493

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 208   gtcatcggcccaacgcctccagggaccggagt 239
             |||||||| || |||||||||||||| |||||
Sbjct: 14934 gtcatcggtccgacgcctccagggacaggagt 14903
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                               
Query: 337     acatcgatgactgccgcgcctggtttgatccagtctcccttgatcatc 384
               ||||||||||| |  ||||| || || |||||||| ||||||||||||
Sbjct: 4778836 acatcgatgaccgtggcgcccggcttaatccagtcgcccttgatcatc 4778883
to top
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179283

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 397   gctgctgcaatgacaatgtctgct 420
             |||||||||||||||||| |||||
Sbjct: 78365 gctgctgcaatgacaatgactgct 78388
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     cacatcgccaacgagcctgt 295
               ||||||||||||||||||||
Sbjct: 3051982 cacatcgccaacgagcctgt 3051963



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    cacatcgccaacgagcctgt 295
              ||||||||||||||||||||
Sbjct: 346853 cacatcgccaacgagcctgt 346834
to top
>ref|NM_001022356.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC2G2.08),
           partial mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 208 gtcatcggcccaacgcctccagggaccggagt 239
           |||||||| || |||||||||||||| |||||
Sbjct: 908 gtcatcggtccgacgcctccagggacaggagt 877
to top
>gb|AC079028.11|AC079028 Arabidopsis thaliana chromosome 1 BAC T32O22 genomic sequence,
            complete sequence
          Length = 50349

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   tcagttacaacatcatcctc 103
            ||||||||||||||||||||
Sbjct: 1343 tcagttacaacatcatcctc 1324
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      cagttacaacatcatcctca 104
               ||||||||||||||||||||
Sbjct: 7724470 cagttacaacatcatcctca 7724451
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>gb|AC035249.7|AC035249 Arabidopsis thaliana chromosome 1 BAC F8D11 genomic sequence,
            complete sequence
          Length = 109431

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   tcagttacaacatcatcctc 103
            ||||||||||||||||||||
Sbjct: 9025 tcagttacaacatcatcctc 9006
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>gb|AC068901.8|AC068901 Arabidopsis thaliana chromosome 1 BAC F1O3 genomic sequence, complete
             sequence
          Length = 74265

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tcagttacaacatcatcctc 103
             ||||||||||||||||||||
Sbjct: 29826 tcagttacaacatcatcctc 29845
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>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cagttacaacatcatcctca 104
             ||||||||||||||||||||
Sbjct: 27051 cagttacaacatcatcctca 27032
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>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0086P08
          Length = 145312

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     cagttacaacatcatcctca 104
              ||||||||||||||||||||
Sbjct: 135046 cagttacaacatcatcctca 135027
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>dbj|AK208410.1| Mus musculus cDNA, clone:Y2G0111C21, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000021443, based on BLAT search
          Length = 383

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 198 cattgccacggtcatcggcccaacgcctccagggac 233
           ||||||||||||||| ||||| |||||  |||||||
Sbjct: 344 cattgccacggtcatgggccccacgccagcagggac 309
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>dbj|AK068349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136B15, full
            insert sequence
          Length = 1222

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   cagttacaacatcatcctca 104
            ||||||||||||||||||||
Sbjct: 1160 cagttacaacatcatcctca 1141
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 397    gctgctgcaatgacaatgtctgct 420
              |||||||||||||||||| |||||
Sbjct: 121382 gctgctgcaatgacaatgactgct 121405
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>emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on chromosome 2, complete
             sequence
          Length = 127298

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   catggcctggcctgctgctg 403
             ||||||||||||||||||||
Sbjct: 69510 catggcctggcctgctgctg 69491
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 202    gccacggtcatcggcccaacgcctccagggac 233
              ||||| ||||| ||||| ||||||||||||||
Sbjct: 506633 gccacagtcataggccctacgcctccagggac 506664
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>gb|AC140934.1| Gallus gallus BAC clone TAM31-90J8 from chromosome ul, complete
             sequence
          Length = 97842

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaaggcataacaaaatggag 62
             ||||||||||||||||||||
Sbjct: 11594 aaaggcataacaaaatggag 11613
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>gb|J05519.1|RATC1H4SY Rat C1-tetrahydrofolate synthase mRNA, complete cds
          Length = 3332

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 198  cattgccacggtcatcggcccaacgcctccagggac 233
            ||||||||||||||| ||||| ||||| || |||||
Sbjct: 1152 cattgccacggtcatgggccccacgccaccggggac 1117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,329,706
Number of Sequences: 3902068
Number of extensions: 4329706
Number of successful extensions: 71178
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70904
Number of HSP's gapped (non-prelim): 274
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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