ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16c21 |
|---|---|
| Clone Library Name | barley_pub |
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 208 bits (529), Expect = 8e-54 Identities = 98/132 (74%), Positives = 115/132 (87%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 RTLQSLACGK RVL K PKG+DI+D D+F+ N+DF L+RIK+N IQMKETVEE STT Sbjct: 762 RTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTT 821 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMKKRIESLIDREYL 143 ERVFQDRQYQ+DAAIVRIMK RKTLSH LL++E++ QLKFP+KPAD+KKRIESLIDR+Y+ Sbjct: 822 ERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYM 881 Query: 142 ERDRSNPQIYNY 107 ERD+ NP YNY Sbjct: 882 ERDKENPNQYNY 893
>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)| Length = 659 Score = 202 bits (513), Expect = 6e-52 Identities = 94/132 (71%), Positives = 114/132 (86%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 RTLQSLACGK RVL K+PKG++++D D+F+FN +F L+RIK+N IQMKETVEE STT Sbjct: 526 RTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTT 585 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMKKRIESLIDREYL 143 ERVFQDRQYQ+DAAIVRIMK RKTL H LL++EL+ QLKFP+KP D+KKRIESLIDR+Y+ Sbjct: 586 ERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYM 645 Query: 142 ERDRSNPQIYNY 107 ERD+ NP Y+Y Sbjct: 646 ERDKDNPNQYHY 657
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 117 bits (292), Expect = 3e-26 Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 4/136 (2%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMK--ETVEENTS 329 R LQSLAC K ++L K PKGR+++ D+F FNE+F + L RIK++ + E E Sbjct: 648 RNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKR 707 Query: 328 TTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPADMKKRIESLID 155 T E+V + R++Q DA IVR+MK RK H L+ E+ +QL +F P +K+RIE+LI+ Sbjct: 708 TLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIE 767 Query: 154 REYLERDRSNPQIYNY 107 REYL+R N +IY Y Sbjct: 768 REYLQRQADNGRIYEY 783
>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)| Length = 768 Score = 114 bits (286), Expect = 1e-25 Identities = 62/138 (44%), Positives = 91/138 (65%), Gaps = 6/138 (4%) Frame = -3 Query: 502 RTLQSLACGKV--RVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMK--ETVEEN 335 R LQSLACGK RVL K PK ++I++ F N+ F++ L+R+K+ + K E+ E Sbjct: 629 RALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPER 688 Query: 334 TSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIKPADMKKRIESL 161 T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE L Sbjct: 689 KETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGL 748 Query: 160 IDREYLERDRSNPQIYNY 107 I+REYL R + ++Y Y Sbjct: 749 IEREYLARTPEDRKVYTY 766
>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)| Length = 768 Score = 114 bits (285), Expect = 2e-25 Identities = 62/138 (44%), Positives = 90/138 (65%), Gaps = 6/138 (4%) Frame = -3 Query: 502 RTLQSLACGKV--RVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMK--ETVEEN 335 R LQSLACGK RVL K PK ++I+ F N+ F++ L+R+K+ + K E+ E Sbjct: 629 RALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPER 688 Query: 334 TSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIKPADMKKRIESL 161 T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE L Sbjct: 689 KETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGL 748 Query: 160 IDREYLERDRSNPQIYNY 107 I+REYL R + ++Y Y Sbjct: 749 IEREYLARTPEDRKVYTY 766
>CUL4_CAEEL (Q17392) Cullin-4| Length = 840 Score = 113 bits (283), Expect = 3e-25 Identities = 53/106 (50%), Positives = 72/106 (67%) Frame = -3 Query: 424 DEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLS 245 ++FV N F+ R+++ + +K VEE E V DRQY++DAA+VRIMK RK L+ Sbjct: 733 EKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLN 792 Query: 244 HTLLITELFQQLKFPIKPADMKKRIESLIDREYLERDRSNPQIYNY 107 H L+TEL QQL+FP+ AD+KKR+ESLI+REY+ RD YNY Sbjct: 793 HQTLMTELLQQLRFPVSTADIKKRLESLIEREYISRDPEEASSYNY 838
>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 108 bits (269), Expect = 1e-23 Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 R L SL+C K ++L K P + + D F FN F+ + RIK+ V+E Sbjct: 607 RLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPVDERKKVV 662 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRIESLIDRE 149 E V +DR+Y +DAAIVRIMK+RK L H L++E +QL KP +KKR+E LI R+ Sbjct: 663 EDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRD 722 Query: 148 YLERDRSNPQIYNY 107 YLERD+ NP ++ Y Sbjct: 723 YLERDKENPNMFRY 736
>CUL3_CAEEL (Q17391) Cullin-3| Length = 777 Score = 107 bits (266), Expect = 3e-23 Identities = 65/138 (47%), Positives = 89/138 (64%), Gaps = 6/138 (4%) Frame = -3 Query: 502 RTLQSLACGKV--RVLQKTPKGRD-IDDKDEFVFNEDFSAPLYRIKVNAIQMK-ETVEEN 335 R LQSLA GK R+L + KG+D ID DEF N++F + L R+KV + K E+ E Sbjct: 638 RNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEI 697 Query: 334 TSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPADMKKRIESL 161 T ++V DR+ +V+AAIVRIMK RK L+H L+ E+ QQL +F P +K+RIE+L Sbjct: 698 RETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETL 757 Query: 160 IDREYLERDRSNPQIYNY 107 I+REYL RD + + Y Y Sbjct: 758 IEREYLARDEHDHRAYQY 775
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 100 bits (250), Expect = 2e-21 Identities = 53/134 (39%), Positives = 84/134 (62%), Gaps = 2/134 (1%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 RTLQSL+C ++R L PK + F NE F+ LYR+K+N I +KE +EN+ Sbjct: 601 RTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQ 660 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRIESLIDRE 149 E+V +DRQ+++ A+IVR+MK ++ + H L+ + +K P +D+K IE L+++E Sbjct: 661 EQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKE 720 Query: 148 YLERDRSNPQIYNY 107 YLER+ ++ IY Y Sbjct: 721 YLEREDND--IYTY 732
>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)| Length = 745 Score = 83.2 bits (204), Expect = 4e-16 Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 +T++SL V+++ + DID + F N +FS+ + K+ K+T +E T Sbjct: 612 KTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTR 669 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRIESLIDRE 149 V +DR+ + AAIVRIMK RK L H LI E+ Q + P + +KK IE LID++ Sbjct: 670 SAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQ 729 Query: 148 YLERDRSNPQIYNY 107 Y+ER +++ Y+Y Sbjct: 730 YIERSQASADEYSY 743
>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)| Length = 745 Score = 83.2 bits (204), Expect = 4e-16 Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 +T++SL V+++ + DID + F N +FS+ + K+ K+T +E T Sbjct: 612 KTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTR 669 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRIESLIDRE 149 V +DR+ + AAIVRIMK RK L H LI E+ Q + P + +KK IE LID++ Sbjct: 670 SAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQ 729 Query: 148 YLERDRSNPQIYNY 107 Y+ER +++ Y+Y Sbjct: 730 YIERSQASADEYSY 743
>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)| Length = 745 Score = 82.4 bits (202), Expect = 7e-16 Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 2/134 (1%) Frame = -3 Query: 502 RTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTT 323 +T++SL V+++ + DID + F N FS+ + K+ K+T +E T Sbjct: 612 KTIKSLL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTR 669 Query: 322 ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRIESLIDRE 149 V +DR+ + AAIVRIMK RK L H LI E+ Q + P + +KK IE LID++ Sbjct: 670 SAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQ 729 Query: 148 YLERDRSNPQIYNY 107 Y+ER +++ Y+Y Sbjct: 730 YIERSQASADEYSY 743
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 74.7 bits (182), Expect = 1e-13 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Frame = -3 Query: 475 KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY 296 K +VL + D + NE+F R+++N E +E+ T + + +DR+ Sbjct: 643 KAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQKQESLETHKTIEEDRKL 702 Query: 295 QVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIKPADMKKRIESLIDREYLERDRSNP 122 + +AIVRIMK R+TL H +L+ E Q+K F K +D+K+ I+ LI++EYLER + Sbjct: 703 LLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDE 762 Query: 121 QIY 113 IY Sbjct: 763 YIY 765
>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)| Length = 774 Score = 68.9 bits (167), Expect = 8e-12 Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Frame = -3 Query: 475 KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY 296 K +VL + + + D+ RI +N E E + + + +DR+ Sbjct: 648 KAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEEDRKL 707 Query: 295 QVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRIESLIDREYLERDRSNP 122 + AAIVRIMK RK L+HT LI+E+ QL KP +KK I+ LI++EYLER + Sbjct: 708 LIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHK 767 Query: 121 QIYNY 107 Y+Y Sbjct: 768 DTYSY 772
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 68.6 bits (166), Expect = 1e-11 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 5/106 (4%) Frame = -3 Query: 409 NEDFSAPLYRIKVNAIQMKETVE---ENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHT 239 N ++ + ++ A Q+ + VE E + T +V QDR+Y ++ AIVRIMKTRK L H Sbjct: 670 NMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHN 729 Query: 238 LLITELFQQLKFPIKP--ADMKKRIESLIDREYLERDRSNPQIYNY 107 L+TE+ Q K P +KK IE LI++ Y++R N + Y Y Sbjct: 730 ALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQY 774
>CUL6_CAEEL (Q21346) Cullin-6| Length = 729 Score = 67.4 bits (163), Expect = 2e-11 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 3/104 (2%) Frame = -3 Query: 409 NEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQ-DRQYQVDAAIVRIMKTRKTLSHTLL 233 N ++ R+ + K T + T + + DR+Y++ A IVRIMKTRK+L+HTLL Sbjct: 624 NTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLL 683 Query: 232 ITELFQQLKFPIKP--ADMKKRIESLIDREYLERDRSNPQIYNY 107 I E+ QLK P +K IE LI++ Y+ R + +Y Y Sbjct: 684 INEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEY 727
>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)| Length = 776 Score = 65.9 bits (159), Expect = 7e-11 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Frame = -3 Query: 382 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 203 R+ +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 681 RVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSS 740 Query: 202 PIKP--ADMKKRIESLIDREYLERDRSNPQIYNY 107 KP +KK I+ LI++EYLER Y+Y Sbjct: 741 RFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSY 774
>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)| Length = 776 Score = 65.9 bits (159), Expect = 7e-11 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Frame = -3 Query: 382 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 203 R+ +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 681 RVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSS 740 Query: 202 PIKP--ADMKKRIESLIDREYLERDRSNPQIYNY 107 KP +KK I+ LI++EYLER Y+Y Sbjct: 741 RFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSY 774
>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)| Length = 776 Score = 65.9 bits (159), Expect = 7e-11 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Frame = -3 Query: 382 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 203 R+ +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 681 RVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSS 740 Query: 202 PIKP--ADMKKRIESLIDREYLERDRSNPQIYNY 107 KP +KK I+ LI++EYLER Y+Y Sbjct: 741 RFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSY 774
>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)| Length = 780 Score = 62.0 bits (149), Expect = 1e-09 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 3/104 (2%) Frame = -3 Query: 409 NEDFSAPLYRIKVNAIQMKETVEENTSTTER-VFQDRQYQVDAAIVRIMKTRKTLSHTLL 233 N+ + R+ ++ MK+ +T ++ V +DR+ + A IVRIMKTRK + H L Sbjct: 675 NKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQL 734 Query: 232 ITELFQQLKFPIKP-ADMKKR-IESLIDREYLERDRSNPQIYNY 107 +TE+ QL KP +M KR I SLI++EY+ R +Y Y Sbjct: 735 MTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEY 778
>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)| Length = 744 Score = 54.7 bits (130), Expect = 2e-07 Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 475 KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQ--MKETVEENTSTTERVF--- 311 + ++L+K+ ++ +F N FS+P ++KV I + +N +T V Sbjct: 617 RCKILKKSSSSGNM----KFSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYD 672 Query: 310 QDRQYQVDAAIVRIMKTRKTLSHTLLI--TELFQQLKFPIKPADMKKRIESLIDREYLER 137 + ++ A IVRIMKT LSH L+ T Q + + P+ +K+ I+ LI++EY++R Sbjct: 673 NEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQR 732 Query: 136 DRSNPQIYNY 107 + +P Y+Y Sbjct: 733 NADDPSYYHY 742
>CUL5_CAEEL (Q23639) Cullin-5| Length = 741 Score = 50.4 bits (119), Expect = 3e-06 Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 19/149 (12%) Frame = -3 Query: 502 RTLQSL-ACGKVR-------VLQKTPKGRDIDDKDEFVFNEDFSA-----PLYRIKVNAI 362 RTL SL A K+R V T RD D +F+ N DF+ R KVN I Sbjct: 591 RTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLI 650 Query: 361 -QMKETVEENTSTT-ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIK 194 +++ ++E N E + R+ +V IV+I+KTRKT + L EL + LK F Sbjct: 651 GRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPN 710 Query: 193 PADMKKRIESLIDREYLER--DRSNPQIY 113 +K++I+ LI+ +Y+ER D N +Y Sbjct: 711 RKIIKEQIDWLIENKYMERRADDINTFVY 739
>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin| ligase complex SCF subunit CDC53) Length = 815 Score = 48.5 bits (114), Expect = 1e-05 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 31/152 (20%) Frame = -3 Query: 499 TLQSLACG-----KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVN---AIQMKETV 344 T+Q +A K +++Q+ P G D K E F S P +K N A +K + Sbjct: 655 TIQHIAAAMVPFIKFKLIQQVPPGLDALVKPETQFK--LSRPYKALKTNINFASGVKNDI 712 Query: 343 EENTST-----------TERVFQD----------RQYQVDAAIVRIMKTRKTLSHTLLIT 227 ++ S +R+ +D RQ ++A IVRIMK ++ L HT L+ Sbjct: 713 LQSLSGGGHDNHGNKLGNKRLTEDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVN 772 Query: 226 ELFQQ--LKFPIKPADMKKRIESLIDREYLER 137 E Q +F K + +K+ I+SLI + YL+R Sbjct: 773 ECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQR 804
>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 48.5 bits (114), Expect = 1e-05 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 15/147 (10%) Frame = -3 Query: 502 RTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PLYRIKVNAIQM 356 RTL SL K +VL P+ +D + F N+DFS R K+N I Sbjct: 632 RTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGR 691 Query: 355 KETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPAD- 185 + E E + Q R + AI++IMK RK +S+ L TEL + LK P Sbjct: 692 LQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKK 751 Query: 184 -MKKRIESLIDREYLERDRSNPQIYNY 107 +K++IE LI+ +Y+ RD ++ + Y Sbjct: 752 MIKEQIEWLIEHKYIRRDEADINTFIY 778
>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)| Length = 780 Score = 48.1 bits (113), Expect = 1e-05 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Frame = -3 Query: 382 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 203 R+++ +M+E EEN E + Q R + AI++IMK RK +S+ L TEL + LK Sbjct: 691 RLQLTTERMRE--EEN----EGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKN 744 Query: 202 PIKPAD--MKKRIESLIDREYLERDRSNPQIYNY 107 P +K++IE LI+ +Y+ RD S+ + Y Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIY 778
>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 48.1 bits (113), Expect = 1e-05 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Frame = -3 Query: 382 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 203 R+++ +M+E EEN E + Q R + AI++IMK RK +S+ L TEL + LK Sbjct: 691 RLQLTTERMRE--EEN----EGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKN 744 Query: 202 PIKPAD--MKKRIESLIDREYLERDRSNPQIYNY 107 P +K++IE LI+ +Y+ RD S+ + Y Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIY 778
>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)| Length = 780 Score = 47.0 bits (110), Expect = 3e-05 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%) Frame = -3 Query: 502 RTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PLYRIKVNAIQM 356 RTL SL K +VL P+ +D + F N+DFS R K+N I Sbjct: 632 RTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGR 691 Query: 355 KETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPAD- 185 + E E + Q R + AI++IMK RK +S+ L TEL + LK P Sbjct: 692 LQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKK 751 Query: 184 -MKKRIESLIDREYLERDRSNPQIYNY 107 +K+++E LI+ Y+ RD ++ + Y Sbjct: 752 MIKEQMEWLIEHRYIRRDEADINTFIY 778
>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 43.5 bits (101), Expect = 4e-04 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Frame = -3 Query: 382 RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 203 R+++ +M+E EEN E + Q R + ++IMK RK +S+ L TEL + LK Sbjct: 691 RLQLTTERMRE--EEN----EGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKN 744 Query: 202 PIKPAD--MKKRIESLIDREYLERDRSNPQIYNY 107 P +K++IE LI+ +Y+ RD S+ + Y Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIY 778
>OXDA_TRIVR (Q99042) D-amino-acid oxidase (EC 1.4.3.3) (DAMOX) (DAO) (DAAO)| Length = 356 Score = 32.3 bits (72), Expect = 0.82 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Frame = -3 Query: 391 PLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 212 P + ++AI + +NT + + +DR V + +++ R HT + Sbjct: 98 PKLEVAMSAICQRNPWFKNTVDSFEIIEDRSRIVHDDVAYLVEFRSVCIHTGVYLNWLMS 157 Query: 211 LKFPIKPADMKKRIESLIDREYLERDRSNPQ-IYNYSGLTAAF 86 + +K+R+ + D L S P I N SGL A F Sbjct: 158 QCLSLGATVVKRRVNHIKDANLLHSSGSRPDVIVNCSGLFARF 200
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 30.8 bits (68), Expect = 2.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 301 DDLEILSQWCLCFLLLFPSSELHSPLCDKGE 393 DDL++L Q+ CFL P+ E +P K E Sbjct: 681 DDLKVLQQFAACFLETLPAQEEQTPKASKRE 711
>CBIT_METJA (Q57836) Probable cobalt-precorrin-6Y C(15)-methyltransferase| [decarboxylating] (EC 2.1.1.-) Length = 183 Score = 30.4 bits (67), Expect = 3.1 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 10/102 (9%) Frame = -3 Query: 499 TLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRI----------KVNAIQMKE 350 T Q+LA ++ Q KGR D D+ FN+ F I K+N I Sbjct: 73 TKQNLAKFNIKNCQII-KGRAEDVLDKLEFNKAFIGGTKNIEKIIEILDKKKINHIVANT 131 Query: 349 TVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 224 V EN + F+ R Y VDA V I +K S + + + Sbjct: 132 IVLENAAKIINEFESRGYNVDAVNVFISYAKKIPSGHMFLAK 173
>Y835_RICCN (Q92HD6) Hypothetical UPF0192 protein RC0835 precursor| Length = 1892 Score = 29.6 bits (65), Expect = 5.3 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%) Frame = -3 Query: 328 TTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMK---------- 179 TT F+ + A +V++ + KT + L ++ FQ ++ P P ++K Sbjct: 358 TTMHSFKVDTFASRALLVKVNQGVKTSDNLTLGSDYFQIVQIPDNPKEVKLMSDGSILSL 417 Query: 178 --KR---IESL-IDREYLERDRSNPQIYNY 107 KR + SL ID+ YLE DR N Q N+ Sbjct: 418 AGKRKLPVYSLGIDKLYLEIDRINQQEVNH 447
>YEF5_YEAST (P32616) Hypothetical 16.5 kDa protein in GLY1-GDA1 intergenic| region Length = 141 Score = 29.3 bits (64), Expect = 7.0 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +2 Query: 308 LKYSLSGACVFFYCF--LHLNCIHLYAIKGSTKIFIKYEFVLIIYISSFWC 454 L YS +G +F+ F L L+ I+ + I ST ++I Y+ VL + + S C Sbjct: 60 LPYSFTGFSFYFFVFFRLFLHWIYAFCICNSTYVYI-YKQVLSLPVKSSMC 109
>PTHB1_HUMAN (Q3SYG4) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein) (Bardet-Biedl syndrome 9 protein) Length = 887 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 Query: 292 VDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMKKRIESLIDR 152 VDAAI ++KT + S L QL P + +KK I L DR Sbjct: 772 VDAAISHLLKTCLSKSSKEQALNLNSQLNIPKDTSQLKKHITLLCDR 818 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,471,858 Number of Sequences: 219361 Number of extensions: 1281509 Number of successful extensions: 2991 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2966 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
