ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16c10 |
|---|---|
| Clone Library Name | barley_pub |
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 226 bits (576), Expect = 4e-59 Identities = 107/145 (73%), Positives = 127/145 (87%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 ++TGIED ELRRTLQSLACGK RVL K PKG+DI+D D+F+ N+DF L+RIK+N IQM Sbjct: 751 QATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQM 810 Query: 431 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMKK 252 KETVEE STTERVFQDRQYQ+DAAIVRIMK RKTLSH LL++E++ QLKFP+KPAD+KK Sbjct: 811 KETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKK 870 Query: 251 RIESLIDREYLERDRSNPQIYNYLA 177 RIESLIDR+Y+ERD+ NP YNY+A Sbjct: 871 RIESLIDRDYMERDKENPNQYNYIA 895
>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)| Length = 659 Score = 219 bits (559), Expect = 4e-57 Identities = 103/144 (71%), Positives = 125/144 (86%) Frame = -3 Query: 608 STGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMK 429 +TGIED ELRRTLQSLACGK RVL K+PKG++++D D+F+FN +F L+RIK+N IQMK Sbjct: 516 ATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMK 575 Query: 428 ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMKKR 249 ETVEE STTERVFQDRQYQ+DAAIVRIMK RKTL H LL++EL+ QLKFP+KP D+KKR Sbjct: 576 ETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKR 635 Query: 248 IESLIDREYLERDRSNPQIYNYLA 177 IESLIDR+Y+ERD+ NP Y+Y+A Sbjct: 636 IESLIDRDYMERDKDNPNQYHYVA 659
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 128 bits (322), Expect = 1e-29 Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 4/149 (2%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 E T IE +L+R LQSLAC K ++L K PKGR+++ D+F FNE+F + L RIK++ + Sbjct: 637 EKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQ 696 Query: 431 K--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPA 264 E E T E+V + R++Q DA IVR+MK RK H L+ E+ +QL +F P Sbjct: 697 TRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPM 756 Query: 263 DMKKRIESLIDREYLERDRSNPQIYNYLA 177 +K+RIE+LI+REYL+R N +IY YLA Sbjct: 757 MIKRRIEALIEREYLQRQADNGRIYEYLA 785
>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)| Length = 768 Score = 124 bits (310), Expect = 3e-28 Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 6/151 (3%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKV--RVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAI 438 + T I ++EL R LQSLACGK RVL K PK ++I++ F N+ F++ L+R+K+ + Sbjct: 618 QETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTV 677 Query: 437 QMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIK 270 K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F Sbjct: 678 AAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPS 737 Query: 269 PADMKKRIESLIDREYLERDRSNPQIYNYLA 177 P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 738 PVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)| Length = 768 Score = 123 bits (309), Expect = 4e-28 Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 6/151 (3%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKV--RVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAI 438 + T I ++EL R LQSLACGK RVL K PK ++I+ F N+ F++ L+R+K+ + Sbjct: 618 QETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTV 677 Query: 437 QMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIK 270 K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F Sbjct: 678 AAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPS 737 Query: 269 PADMKKRIESLIDREYLERDRSNPQIYNYLA 177 P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 738 PVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>CUL4_CAEEL (Q17392) Cullin-4| Length = 840 Score = 116 bits (291), Expect = 5e-26 Identities = 65/155 (41%), Positives = 93/155 (60%), Gaps = 10/155 (6%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACG--KVRVLQKTPKGRDIDDK--------DEFVFNEDFSAPL 462 E T I + E+ + + +L G K +VLQ+ G + ++FV N F+ Sbjct: 686 EHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKR 745 Query: 461 YRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK 282 R+++ + +K VEE E V DRQY++DAA+VRIMK RK L+H L+TEL QQL+ Sbjct: 746 CRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLR 805 Query: 281 FPIKPADMKKRIESLIDREYLERDRSNPQIYNYLA 177 FP+ AD+KKR+ESLI+REY+ RD YNY+A Sbjct: 806 FPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
>CUL3_CAEEL (Q17391) Cullin-3| Length = 777 Score = 116 bits (290), Expect = 6e-26 Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 6/147 (4%) Frame = -3 Query: 599 IEDKELRRTLQSLACGKV--RVLQKTPKGRD-IDDKDEFVFNEDFSAPLYRIKVNAIQMK 429 I ++EL+R LQSLA GK R+L + KG+D ID DEF N++F + L R+KV + K Sbjct: 631 IPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGK 690 Query: 428 -ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPADM 258 E+ E T ++V DR+ +V+AAIVRIMK RK L+H L+ E+ QQL +F P + Sbjct: 691 VESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIII 750 Query: 257 KKRIESLIDREYLERDRSNPQIYNYLA 177 K+RIE+LI+REYL RD + + Y Y+A Sbjct: 751 KQRIETLIEREYLARDEHDHRAYQYIA 777
>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 113 bits (282), Expect = 5e-25 Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 2/143 (1%) Frame = -3 Query: 599 IEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETV 420 + ++L R L SL+C K ++L K P + + D F FN F+ + RIK+ V Sbjct: 600 LSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPV 655 Query: 419 EENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADMKKRI 246 +E E V +DR+Y +DAAIVRIMK+RK L H L++E +QL KP +KKR+ Sbjct: 656 DERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRM 715 Query: 245 ESLIDREYLERDRSNPQIYNYLA 177 E LI R+YLERD+ NP ++ YLA Sbjct: 716 EDLITRDYLERDKENPNMFRYLA 738
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 108 bits (269), Expect = 2e-23 Identities = 57/146 (39%), Positives = 92/146 (63%), Gaps = 2/146 (1%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 +ST + D +L RTLQSL+C ++R L PK + F NE F+ LYR+K+N I + Sbjct: 590 KSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYL 649 Query: 431 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADM 258 KE +EN+ E+V +DRQ+++ A+IVR+MK ++ + H L+ + +K P +D+ Sbjct: 650 KEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDV 709 Query: 257 KKRIESLIDREYLERDRSNPQIYNYL 180 K IE L+++EYLER+ ++ IY Y+ Sbjct: 710 KTAIEKLLEKEYLEREDND--IYTYV 733
>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)| Length = 745 Score = 94.7 bits (234), Expect = 2e-19 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 +ST + +KEL +T++SL V+++ + DID + F N +FS+ + K+ Sbjct: 601 DSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQ 658 Query: 431 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADM 258 K+T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q + P + + Sbjct: 659 KDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMI 718 Query: 257 KKRIESLIDREYLERDRSNPQIYNYLA 177 KK IE LID++Y+ER +++ Y+Y+A Sbjct: 719 KKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)| Length = 745 Score = 94.7 bits (234), Expect = 2e-19 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 +ST + +KEL +T++SL V+++ + DID + F N +FS+ + K+ Sbjct: 601 DSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQ 658 Query: 431 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADM 258 K+T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q + P + + Sbjct: 659 KDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMI 718 Query: 257 KKRIESLIDREYLERDRSNPQIYNYLA 177 KK IE LID++Y+ER +++ Y+Y+A Sbjct: 719 KKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)| Length = 745 Score = 94.0 bits (232), Expect = 3e-19 Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 2/147 (1%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 +ST + +KEL +T++SL V+++ + DID + F N FS+ + K+ Sbjct: 601 DSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQ 658 Query: 431 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADM 258 K+T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q + P + + Sbjct: 659 KDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMI 718 Query: 257 KKRIESLIDREYLERDRSNPQIYNYLA 177 KK IE LID++Y+ER +++ Y+Y+A Sbjct: 719 KKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Frame = -3 Query: 551 KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY 372 K +VL + D + NE+F R+++N E +E+ T + + +DR+ Sbjct: 643 KAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQKQESLETHKTIEEDRKL 702 Query: 371 QVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIKPADMKKRIESLIDREYLERDRSNP 198 + +AIVRIMK R+TL H +L+ E Q+K F K +D+K+ I+ LI++EYLER + Sbjct: 703 LLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDE 762 Query: 197 QIY 189 IY Sbjct: 763 YIY 765
>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)| Length = 774 Score = 74.7 bits (182), Expect = 2e-13 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 2/147 (1%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 432 ++T + + L + LQ L K +VL + + + D+ RI +N Sbjct: 630 DNTQTQQENLIQVLQILL--KAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLK 687 Query: 431 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADM 258 E E + + + +DR+ + AAIVRIMK RK L+HT LI+E+ QL KP + Sbjct: 688 TELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVI 747 Query: 257 KKRIESLIDREYLERDRSNPQIYNYLA 177 KK I+ LI++EYLER + Y+YLA Sbjct: 748 KKCIDILIEKEYLERMEGHKDTYSYLA 774
>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)| Length = 776 Score = 72.8 bits (177), Expect = 7e-13 Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 10/155 (6%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY--------R 456 +ST I+ L + LQ L K+ VL+ + + DE D LY R Sbjct: 627 DSTQIKMDILAQVLQILLKSKLLVLED-----ENANVDEVELKPDTLIKLYLGYKNKKLR 681 Query: 455 IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFP 276 + +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 682 VNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSR 741 Query: 275 IKP--ADMKKRIESLIDREYLERDRSNPQIYNYLA 177 KP +KK I+ LI++EYLER Y+YLA Sbjct: 742 FKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)| Length = 776 Score = 72.8 bits (177), Expect = 7e-13 Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 10/155 (6%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY--------R 456 +ST I+ L + LQ L K+ VL+ + + DE D LY R Sbjct: 627 DSTQIKMDILAQVLQILLKSKLLVLED-----ENANVDEVELKPDTLIKLYLGYKNKKLR 681 Query: 455 IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFP 276 + +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 682 VNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSR 741 Query: 275 IKP--ADMKKRIESLIDREYLERDRSNPQIYNYLA 177 KP +KK I+ LI++EYLER Y+YLA Sbjct: 742 FKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)| Length = 776 Score = 72.8 bits (177), Expect = 7e-13 Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 10/155 (6%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY--------R 456 +ST I+ L + LQ L K+ VL+ + + DE D LY R Sbjct: 627 DSTQIKMDILAQVLQILLKSKLLVLED-----ENANVDEVELKPDTLIKLYLGYKNKKLR 681 Query: 455 IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFP 276 + +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 682 VNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSR 741 Query: 275 IKP--ADMKKRIESLIDREYLERDRSNPQIYNYLA 177 KP +KK I+ LI++EYLER Y+YLA Sbjct: 742 FKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 71.6 bits (174), Expect = 2e-12 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 5/108 (4%) Frame = -3 Query: 485 NEDFSAPLYRIKVNAIQMKETVE---ENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHT 315 N ++ + ++ A Q+ + VE E + T +V QDR+Y ++ AIVRIMKTRK L H Sbjct: 670 NMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHN 729 Query: 314 LLITELFQQLKFPIKP--ADMKKRIESLIDREYLERDRSNPQIYNYLA 177 L+TE+ Q K P +KK IE LI++ Y++R N + Y YLA Sbjct: 730 ALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 776
>CUL6_CAEEL (Q21346) Cullin-6| Length = 729 Score = 70.5 bits (171), Expect = 4e-12 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%) Frame = -3 Query: 485 NEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQ-DRQYQVDAAIVRIMKTRKTLSHTLL 309 N ++ R+ + K T + T + + DR+Y++ A IVRIMKTRK+L+HTLL Sbjct: 624 NTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLL 683 Query: 308 ITELFQQLKFPIKP--ADMKKRIESLIDREYLERDRSNPQIYNYLA 177 I E+ QLK P +K IE LI++ Y+ R + +Y YLA Sbjct: 684 INEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)| Length = 780 Score = 65.1 bits (157), Expect = 2e-10 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Frame = -3 Query: 485 NEDFSAPLYRIKVNAIQMKETVEENTSTTER-VFQDRQYQVDAAIVRIMKTRKTLSHTLL 309 N+ + R+ ++ MK+ +T ++ V +DR+ + A IVRIMKTRK + H L Sbjct: 675 NKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQL 734 Query: 308 ITELFQQLKFPIKP-ADMKKR-IESLIDREYLERDRSNPQIYNYLA 177 +TE+ QL KP +M KR I SLI++EY+ R +Y YLA Sbjct: 735 MTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 60.1 bits (144), Expect = 5e-09 Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 15/159 (9%) Frame = -3 Query: 608 STGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PL 462 +T + D ELRRTL SL K +VL P+ +D + F N+DFS Sbjct: 622 ATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQ 681 Query: 461 YRIKVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 288 R K+N I + E E + Q R + AI++IMK RK +S+ L TEL + Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 741 Query: 287 LKFPIKPAD--MKKRIESLIDREYLERDRSNPQIYNYLA 177 LK P +K++IE LI+ +Y+ RD ++ + Y+A Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)| Length = 780 Score = 59.7 bits (143), Expect = 7e-09 Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 15/159 (9%) Frame = -3 Query: 608 STGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PL 462 +T + D ELRRTL SL K +VL P+ +D + F N++FS Sbjct: 622 ATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQ 681 Query: 461 YRIKVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 288 R K+N I + E E + Q R + AI++IMK RK +S+ L TEL + Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 741 Query: 287 LKFPIKPAD--MKKRIESLIDREYLERDRSNPQIYNYLA 177 LK P +K++IE LI+ +Y+ RD S+ + Y+A Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 59.7 bits (143), Expect = 7e-09 Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 15/159 (9%) Frame = -3 Query: 608 STGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PL 462 +T + D ELRRTL SL K +VL P+ +D + F N++FS Sbjct: 622 ATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQ 681 Query: 461 YRIKVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 288 R K+N I + E E + Q R + AI++IMK RK +S+ L TEL + Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 741 Query: 287 LKFPIKPAD--MKKRIESLIDREYLERDRSNPQIYNYLA 177 LK P +K++IE LI+ +Y+ RD S+ + Y+A Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>CUL5_CAEEL (Q23639) Cullin-5| Length = 741 Score = 58.9 bits (141), Expect = 1e-08 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 17/161 (10%) Frame = -3 Query: 608 STGIEDKELRRTLQSL-ACGKVR-------VLQKTPKGRDIDDKDEFVFNEDFSA----- 468 +T + D EL RTL SL A K+R V T RD D +F+ N DF+ Sbjct: 581 ATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGK 640 Query: 467 PLYRIKVNAI-QMKETVEENTSTT-ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELF 294 R KVN I +++ ++E N E + R+ +V IV+I+KTRKT + L EL Sbjct: 641 SQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYTLAQLTMELV 700 Query: 293 QQLK--FPIKPADMKKRIESLIDREYLERDRSNPQIYNYLA 177 + LK F +K++I+ LI+ +Y+ER + + Y++ Sbjct: 701 EILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 741
>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)| Length = 780 Score = 58.5 bits (140), Expect = 1e-08 Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 15/159 (9%) Frame = -3 Query: 608 STGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PL 462 +T + D ELRRTL SL K +VL P+ +D + F N+DFS Sbjct: 622 ATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQ 681 Query: 461 YRIKVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 288 R K+N I + E E + Q R + AI++IMK RK +S+ L TEL + Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEI 741 Query: 287 LKFPIKPAD--MKKRIESLIDREYLERDRSNPQIYNYLA 177 LK P +K+++E LI+ Y+ RD ++ + Y+A Sbjct: 742 LKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)| Length = 744 Score = 57.0 bits (136), Expect = 4e-08 Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 8/153 (5%) Frame = -3 Query: 611 ESTGIEDKELRRTLQSLAC-GKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQ 435 E T I +++ + S++ + ++L+K+ ++ +F N FS+P ++KV I Sbjct: 596 ELTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNM----KFSVNYFFSSPNRKVKVPVIA 651 Query: 434 --MKETVEENTSTTERVF---QDRQYQVDAAIVRIMKTRKTLSHTLLI--TELFQQLKFP 276 + +N +T V + ++ A IVRIMKT LSH L+ T Q + Sbjct: 652 CPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLS 711 Query: 275 IKPADMKKRIESLIDREYLERDRSNPQIYNYLA 177 + P+ +K+ I+ LI++EY++R+ +P Y+YL+ Sbjct: 712 LTPSILKRSIQLLIEKEYIQRNADDPSYYHYLS 744
>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 55.1 bits (131), Expect = 2e-07 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 15/159 (9%) Frame = -3 Query: 608 STGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFSA-----PL 462 +T + D ELRRTL SL K +VL P+ +D + F N++FS Sbjct: 622 ATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQ 681 Query: 461 YRIKVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 288 R K+N I + E E + Q R + ++IMK RK +S+ L TEL + Sbjct: 682 KRGKINLIGRLQLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEI 741 Query: 287 LKFPIKPAD--MKKRIESLIDREYLERDRSNPQIYNYLA 177 LK P +K++IE LI+ +Y+ RD S+ + Y+A Sbjct: 742 LKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin| ligase complex SCF subunit CDC53) Length = 815 Score = 50.8 bits (120), Expect = 3e-06 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 31/164 (18%) Frame = -3 Query: 575 TLQSLACG-----KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVN---AIQMKETV 420 T+Q +A K +++Q+ P G D K E F S P +K N A +K + Sbjct: 655 TIQHIAAAMVPFIKFKLIQQVPPGLDALVKPETQFK--LSRPYKALKTNINFASGVKNDI 712 Query: 419 EENTST-----------TERVFQD----------RQYQVDAAIVRIMKTRKTLSHTLLIT 303 ++ S +R+ +D RQ ++A IVRIMK ++ L HT L+ Sbjct: 713 LQSLSGGGHDNHGNKLGNKRLTEDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVN 772 Query: 302 ELFQQ--LKFPIKPADMKKRIESLIDREYLERDRSNPQIYNYLA 177 E Q +F K + +K+ I+SLI + YL+R + + Y YLA Sbjct: 773 ECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRG-DDGESYAYLA 815
>Y835_RICCN (Q92HD6) Hypothetical UPF0192 protein RC0835 precursor| Length = 1892 Score = 31.2 bits (69), Expect = 2.5 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 16/91 (17%) Frame = -3 Query: 404 TTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADMK---------- 255 TT F+ + A +V++ + KT + L ++ FQ ++ P P ++K Sbjct: 358 TTMHSFKVDTFASRALLVKVNQGVKTSDNLTLGSDYFQIVQIPDNPKEVKLMSDGSILSL 417 Query: 254 --KR---IESL-IDREYLERDRSNPQIYNYL 180 KR + SL ID+ YLE DR N Q N+L Sbjct: 418 AGKRKLPVYSLGIDKLYLEIDRINQQEVNHL 448
>CBIT_METJA (Q57836) Probable cobalt-precorrin-6Y C(15)-methyltransferase| [decarboxylating] (EC 2.1.1.-) Length = 183 Score = 31.2 bits (69), Expect = 2.5 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 10/108 (9%) Frame = -3 Query: 593 DKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRI----------KVN 444 D + T Q+LA ++ Q KGR D D+ FN+ F I K+N Sbjct: 67 DGAIEVTKQNLAKFNIKNCQII-KGRAEDVLDKLEFNKAFIGGTKNIEKIIEILDKKKIN 125 Query: 443 AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 300 I V EN + F+ R Y VDA V I +K S + + + Sbjct: 126 HIVANTIVLENAAKIINEFESRGYNVDAVNVFISYAKKIPSGHMFLAK 173
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 377 DDLEILSQWCLCFLLLFPSSELHSPLCDKGE 469 DDL++L Q+ CFL P+ E +P K E Sbjct: 681 DDLKVLQQFAACFLETLPAQEEQTPKASKRE 711
>YEF5_YEAST (P32616) Hypothetical 16.5 kDa protein in GLY1-GDA1 intergenic| region Length = 141 Score = 29.3 bits (64), Expect = 9.5 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +3 Query: 384 LKYSLSGACVFFYCF--LHLNCIHLYAIKGSTKIFIKYEFVLIIYISSFWC 530 L YS +G +F+ F L L+ I+ + I ST ++I Y+ VL + + S C Sbjct: 60 LPYSFTGFSFYFFVFFRLFLHWIYAFCICNSTYVYI-YKQVLSLPVKSSMC 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,304,826 Number of Sequences: 219361 Number of extensions: 1460678 Number of successful extensions: 3546 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3516 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
