Clone Name | rbasd15m22 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CYB_STRTC (Q36551) Cytochrome b | 28 | 4.8 | 2 | CYB_YARLI (Q9B6D0) Cytochrome b | 28 | 6.2 | 3 | CYB_MYCVI (Q36445) Cytochrome b | 28 | 8.2 |
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>CYB_STRTC (Q36551) Cytochrome b| Length = 389 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 218 THGSFSSFFAVWV*ASRGRXVRXGAVASSRIQGWSKG 108 TH + +SFF ++V A GR + + S R+ WS G Sbjct: 81 THANVASFFFIFVYAHIGRGLYYNSYKSPRVLLWSIG 117
>CYB_YARLI (Q9B6D0) Cytochrome b| Length = 385 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 215 HGSFSSFFAVWV*ASRGRXVRXGAVASSRIQGWSKG 108 H + +SFF + + A GR + G+ + R+ WS G Sbjct: 82 HANTASFFFICIYAHMGRNIYYGSYKTPRVLPWSIG 117
>CYB_MYCVI (Q36445) Cytochrome b| Length = 389 Score = 27.7 bits (60), Expect = 8.2 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 239 YYLRGGVTHGSFSSFFAVWV*ASRGRXVRXGAVASSRIQGWSKG 108 Y LR TH + +SFF +++ GR + G+ + R+ WS G Sbjct: 76 YILR--YTHANVASFFFIFIYVHIGRGLWYGSYRAPRVLLWSIG 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,815,336 Number of Sequences: 219361 Number of extensions: 513055 Number of successful extensions: 1274 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1274 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)