ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
2dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
3dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
4dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
5dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
6ref|XM_463621.1| Oryza sativa (japonica cultivar-group), predic... 66 2e-07
7emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in... 42 2.2
8gb|AC010181.17| Homo sapiens 3 BAC RP11-68L1 (Roswell Park Cance... 42 2.2
9emb|AL590418.16| Mouse DNA sequence from clone RP23-206I14 on ch... 42 2.2
10gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome ... 40 8.6
11ref|XM_707013.1| Candida albicans SC5314 putative transcriptiona... 40 8.6
12ref|XM_706989.1| Candida albicans SC5314 putative transcriptiona... 40 8.6
13gb|AC134904.5| Mus musculus BAC clone RP23-342C18 from chromosom... 40 8.6
14gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, co... 40 8.6
15ref|XM_544963.2| PREDICTED: Canis familiaris similar to WD repea... 40 8.6
16ref|XM_854473.1| PREDICTED: Canis familiaris similar to WD repea... 40 8.6
17gb|AY458649.1| Uncultured bacterium 582 clone EBAC080-L028H02 ge... 40 8.6
18gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome... 40 8.6
19emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 i... 40 8.6
20gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete s... 40 8.6
21emb|Z98880.1|HS179P9 Human DNA sequence from clone RP1-179P9 on ... 40 8.6
22emb|AL355852.23| Human DNA sequence from clone RP11-403E24 on ch... 40 8.6
23emb|AL049844.7|HSJ468K18 Human DNA sequence from clone RP3-468K1... 40 8.6
24emb|AL078598.4|HSDJ488M4 Human DNA sequence from clone RP3-488M4... 40 8.6
25gb|AY157668.1| Pisum sativum chloroplast protein translocon comp... 40 8.6
26gb|AC151965.2| Mus musculus BAC clone RP24-173B17 from chromosom... 40 8.6
27emb|CR762439.7| Zebrafish DNA sequence from clone DKEY-261I20 in... 40 8.6
28emb|BX936318.10| Zebrafish DNA sequence from clone CH211-229O17 ... 40 8.6
29gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, com... 40 8.6
30gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome ... 40 8.6
31gb|AC104464.2| Homo sapiens chromosome 1 clone RP5-994L8, comple... 40 8.6
32dbj|AB094476.1| Asparagus acutifolius DNA, microsatellite AA04, ... 40 8.6
33emb|BX005363.6| Zebrafish DNA sequence from clone CH211-243H4 in... 40 8.6
34emb|AJ243758.1|PSA243758 Pisum sativum mRNA for chloroplastic in... 40 8.6
35emb|BX005419.6| Zebrafish DNA sequence from clone DKEY-199L1 in ... 40 8.6
36gb|AF414113.1| Candida albicans transcription regulatory factor ... 40 8.6
37emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on ch... 40 8.6
38emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chr... 40 8.6
39emb|AL929227.8| Mouse DNA sequence from clone RP23-16E8 on chrom... 40 8.6
40gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, compl... 40 8.6
41gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, comple... 40 8.6
42emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chro... 40 8.6 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                            
Query: 275      tcctacggcaggtcggacacttgctctgagcctggatggaggcctggatgcacttctggc 334
                |||| |||||||| || |||||  ||||||||||||| ||||||| ||| |||| || ||
Sbjct: 40113986 tcctccggcaggtagggcacttcttctgagcctggattgaggccttgatacactgcttgc 40113927

                                                                       
Query: 335      agaagatgtggccacatatggttgatgatggatcgaccagctcattcatgcagac 389
                | || ||||| || || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 40113926 aaaaaatgtgaccgcagatggtcgatgacggttcgaccagctcgttcatgcagac 40113872
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>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0678F11
          Length = 154292

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                         
Query: 275   tcctacggcaggtcggacacttgctctgagcctggatggaggcctggatgcacttctggc 334
             |||| |||||||| || |||||  ||||||||||||| ||||||| ||| |||| || ||
Sbjct: 57070 tcctccggcaggtagggcacttcttctgagcctggattgaggccttgatacactgcttgc 57011

                                                                    
Query: 335   agaagatgtggccacatatggttgatgatggatcgaccagctcattcatgcagac 389
             | || ||||| || || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 57010 aaaaaatgtgaccgcagatggtcgatgacggttcgaccagctcgttcatgcagac 56956
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>dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D05, full
           insert sequence
          Length = 1095

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                       
Query: 275 tcctacggcaggtcggacacttgctctgagcctggatggaggcctggatgcacttctggc 334
           |||| |||||||| || |||||  ||||||||||||| ||||||| ||| |||| || ||
Sbjct: 885 tcctccggcaggtagggcacttcttctgagcctggattgaggccttgatacactgcttgc 826

                                                                  
Query: 335 agaagatgtggccacatatggttgatgatggatcgaccagctcattcatgcagac 389
           | || ||||| || || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 825 aaaaaatgtgaccgcagatggtcgatgacggttcgaccagctcgttcatgcagac 771
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>dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M15, full
           insert sequence
          Length = 1243

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                       
Query: 275 tcctacggcaggtcggacacttgctctgagcctggatggaggcctggatgcacttctggc 334
           |||| |||||||| || |||||  ||||||||||||| ||||||| ||| |||| || ||
Sbjct: 968 tcctccggcaggtagggcacttcttctgagcctggattgaggccttgatacactgcttgc 909

                                                                  
Query: 335 agaagatgtggccacatatggttgatgatggatcgaccagctcattcatgcagac 389
           | || ||||| || || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 908 aaaaaatgtgaccgcagatggtcgatgacggttcgaccagctcgttcatgcagac 854
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>dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D10, full
           insert sequence
          Length = 1147

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                       
Query: 275 tcctacggcaggtcggacacttgctctgagcctggatggaggcctggatgcacttctggc 334
           |||| |||||||| || |||||  ||||||||||||| ||||||| ||| |||| || ||
Sbjct: 885 tcctccggcaggtagggcacttcttctgagcctggattgaggccttgatacactgcttgc 826

                                                                  
Query: 335 agaagatgtggccacatatggttgatgatggatcgaccagctcattcatgcagac 389
           | || ||||| || || ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 825 aaaaaatgtgaccgcagatggtcgatgacggttcgaccagctcgttcatgcagac 771
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>ref|XM_463621.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                       
Query: 275 tcctacggcaggtcggacacttgctctgagcctggatggaggcctggatgcacttctggc 334
           |||| |||||||| || |||||  ||||||||||||| ||||||| ||| |||| || ||
Sbjct: 109 tcctccggcaggtagggcacttcttctgagcctggattgaggccttgatacactgcttgc 50

                                                            
Query: 335 agaagatgtggccacatatggttgatgatggatcgaccagctcattcat 383
           | || ||||| || || ||||| ||||| || ||||||||||| |||||
Sbjct: 49  aaaaaatgtgaccgcagatggtcgatgacggttcgaccagctcgttcat 1
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>emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in linkage group 1,
              complete sequence
          Length = 214471

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 386    agactggacagctaaactttg 406
              |||||||||||||||||||||
Sbjct: 208900 agactggacagctaaactttg 208920
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>gb|AC010181.17| Homo sapiens 3 BAC RP11-68L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 29651

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 304   gcctggatggaggcctggatg 324
             |||||||||||||||||||||
Sbjct: 13529 gcctggatggaggcctggatg 13509
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>emb|AL590418.16| Mouse DNA sequence from clone RP23-206I14 on chromosome 2, complete
             sequence
          Length = 175045

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   cttctggcagaagatgtggcc 347
             |||||||||||||||||||||
Sbjct: 25598 cttctggcagaagatgtggcc 25578
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>gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome 18, complete sequence
          Length = 181022

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 607   ggaggaaccatgtctgcact 626
             ||||||||||||||||||||
Sbjct: 62102 ggaggaaccatgtctgcact 62121
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>ref|XM_707013.1| Candida albicans SC5314 putative transcriptional regulator of
            filamentous growth (CaO19.1093), mRNA
          Length = 2454

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  gttgttgttgttggctctgg 508
            ||||||||||||||||||||
Sbjct: 1174 gttgttgttgttggctctgg 1155
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>ref|XM_706989.1| Candida albicans SC5314 putative transcriptional regulator of
            filamentous growth (CaO19.8695), mRNA
          Length = 2454

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  gttgttgttgttggctctgg 508
            ||||||||||||||||||||
Sbjct: 1174 gttgttgttgttggctctgg 1155
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>gb|AC134904.5| Mus musculus BAC clone RP23-342C18 from chromosome 5, complete sequence
          Length = 198357

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    tcattcatgcagactggaca 395
              ||||||||||||||||||||
Sbjct: 171325 tcattcatgcagactggaca 171344
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>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence
          Length = 189685

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  ttggttgcaggtatgtccac 473
            ||||||||||||||||||||
Sbjct: 1749 ttggttgcaggtatgtccac 1730
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>ref|XM_544963.2| PREDICTED: Canis familiaris similar to WD repeat and FYVE domain
             containing 3 isoform 1, transcript variant 1 (LOC487841),
             mRNA
          Length = 10584

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 323   tgcacttctggcagaagatgtggccaca 350
             ||||||||||||||||||  ||||||||
Sbjct: 10465 tgcacttctggcagaagagctggccaca 10438
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>ref|XM_854473.1| PREDICTED: Canis familiaris similar to WD repeat and FYVE domain
             containing 3 isoform 1, transcript variant 3 (LOC487841),
             mRNA
          Length = 10530

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 323   tgcacttctggcagaagatgtggccaca 350
             ||||||||||||||||||  ||||||||
Sbjct: 10411 tgcacttctggcagaagagctggccaca 10384
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>gb|AY458649.1| Uncultured bacterium 582 clone EBAC080-L028H02 genomic sequence
          Length = 145153

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   gagcctgttggttgcaggta 466
             ||||||||||||||||||||
Sbjct: 20826 gagcctgttggttgcaggta 20845
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>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   ttggttgcaggtatgtccac 473
             ||||||||||||||||||||
Sbjct: 76683 ttggttgcaggtatgtccac 76664
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>emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 in linkage group 13,
              complete sequence
          Length = 180933

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    tgtgttcacatgctcatcag 568
              ||||||||||||||||||||
Sbjct: 132109 tgtgttcacatgctcatcag 132128
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>gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete sequence
          Length = 93375

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ggggtaaaagagtaaataaa 209
             ||||||||||||||||||||
Sbjct: 24559 ggggtaaaagagtaaataaa 24540
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>emb|Z98880.1|HS179P9 Human DNA sequence from clone RP1-179P9 on chromosome 6q22 Contains the
             3' part of the ROS1 gene for v-ros UR2 sarcoma virus
             oncogene homolog 1 (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 108260

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    ctttaaagaaaagcaaatga 114
             ||||||||||||||||||||
Sbjct: 95708 ctttaaagaaaagcaaatga 95689
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>emb|AL355852.23| Human DNA sequence from clone RP11-403E24 on chromosome X Contains
            gene FLJ39827 and a CpG island, complete sequence
          Length = 128765

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 488  ggttgttgttgttggctctg 507
            ||||||||||||||||||||
Sbjct: 3692 ggttgttgttgttggctctg 3673
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>emb|AL049844.7|HSJ468K18 Human DNA sequence from clone RP3-468K18 on chromosome 6q24.1-24.3
             Contains part of the gene for a novel protein (contains
             KIAA0680), the gene for a novel protein (similar to
             nucleolin) (contains FLJ14909), the gene for a novel
             protein similar to a  hypothetical mouse protein, and part
             of the PLAGL1 gene for pleiomorphic adenoma gene-like 1
             (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor). Contains a
             CpG island, complete sequence
          Length = 137387

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    actttaaagaaaagcaaatg 113
             ||||||||||||||||||||
Sbjct: 68396 actttaaagaaaagcaaatg 68377
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>emb|AL078598.4|HSDJ488M4 Human DNA sequence from clone RP3-488M4 on chromosome 6q12-13, complete
             sequence
          Length = 55520

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   acacttgctctgagcctgga 310
             ||||||||||||||||||||
Sbjct: 10009 acacttgctctgagcctgga 9990
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>gb|AY157668.1| Pisum sativum chloroplast protein translocon component Tic40
           precursor (Tic40) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1311

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 454 ttggttgcaggtatgtccactgtg 477
           ||||||||||||||||| ||||||
Sbjct: 596 ttggttgcaggtatgtctactgtg 573
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>gb|AC151965.2| Mus musculus BAC clone RP24-173B17 from chromosome 5, complete sequence
          Length = 221687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    tcattcatgcagactggaca 395
              ||||||||||||||||||||
Sbjct: 119816 tcattcatgcagactggaca 119797
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>emb|CR762439.7| Zebrafish DNA sequence from clone DKEY-261I20 in linkage group 13,
              complete sequence
          Length = 136285

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    tgtgttcacatgctcatcag 568
              ||||||||||||||||||||
Sbjct: 131144 tgtgttcacatgctcatcag 131163
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>emb|BX936318.10| Zebrafish DNA sequence from clone CH211-229O17 in linkage group 13,
             complete sequence
          Length = 158912

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   tgtgttcacatgctcatcag 568
             ||||||||||||||||||||
Sbjct: 42761 tgtgttcacatgctcatcag 42742
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>gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, complete sequence
          Length = 126083

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  gctctgagcctggatggagg 316
            ||||||||||||||||||||
Sbjct: 5148 gctctgagcctggatggagg 5129
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>gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome 5, complete sequence
          Length = 193583

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   tcattcatgcagactggaca 395
             ||||||||||||||||||||
Sbjct: 94997 tcattcatgcagactggaca 94978
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>gb|AC104464.2| Homo sapiens chromosome 1 clone RP5-994L8, complete sequence
          Length = 153772

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   catttcggacttccttcacaggtg 433
             |||||| |||||||||||||||||
Sbjct: 53752 catttctgacttccttcacaggtg 53775
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>dbj|AB094476.1| Asparagus acutifolius DNA, microsatellite AA04, partial sequence
          Length = 209

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 489 gttgttgttgttggctctggggtg 512
           ||||||||||||||| ||||||||
Sbjct: 108 gttgttgttgttggccctggggtg 85
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>emb|BX005363.6| Zebrafish DNA sequence from clone CH211-243H4 in linkage group 5,
             complete sequence
          Length = 172224

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   aataaaacagggtggatcag 223
             ||||||||||||||||||||
Sbjct: 83300 aataaaacagggtggatcag 83281
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>emb|AJ243758.1|PSA243758 Pisum sativum mRNA for chloroplastic inner envelope protein
           translocon (Tic40 gene)
          Length = 1744

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 454 ttggttgcaggtatgtccactgtg 477
           ||||||||||||||||| ||||||
Sbjct: 629 ttggttgcaggtatgtctactgtg 606
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>emb|BX005419.6| Zebrafish DNA sequence from clone DKEY-199L1 in linkage group 5,
             complete sequence
          Length = 179504

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   aataaaacagggtggatcag 223
             ||||||||||||||||||||
Sbjct: 32406 aataaaacagggtggatcag 32425
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>gb|AF414113.1| Candida albicans transcription regulatory factor FLO8p gene, complete
            cds
          Length = 3428

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  gttgttgttgttggctctgg 508
            ||||||||||||||||||||
Sbjct: 1471 gttgttgttgttggctctgg 1452
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>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete
              sequence
          Length = 212233

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 481    atcatgaggttgttgttgtt 500
              ||||||||||||||||||||
Sbjct: 119331 atcatgaggttgttgttgtt 119350
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>emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chromosome 4, complete
              sequence
          Length = 174746

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    tcatgaggttgttgttgttg 501
              ||||||||||||||||||||
Sbjct: 104909 tcatgaggttgttgttgttg 104928
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>emb|AL929227.8| Mouse DNA sequence from clone RP23-16E8 on chromosome 2, complete
             sequence
          Length = 61712

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   tcattcatgcagactggaca 395
             ||||||||||||||||||||
Sbjct: 17279 tcattcatgcagactggaca 17260
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>gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, complete sequence
          Length = 220538

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 483    catgaggttgttgttgttgg 502
              ||||||||||||||||||||
Sbjct: 122529 catgaggttgttgttgttgg 122548
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>gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, complete sequence
          Length = 167334

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    tcattcatgcagactggaca 395
              ||||||||||||||||||||
Sbjct: 154264 tcattcatgcagactggaca 154245
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>emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chromosome 2, complete
             sequence
          Length = 169779

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   agagtaaataaaacagggtg 217
             ||||||||||||||||||||
Sbjct: 59552 agagtaaataaaacagggtg 59533


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,167,834
Number of Sequences: 3902068
Number of extensions: 6167834
Number of successful extensions: 126464
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126372
Number of HSP's gapped (non-prelim): 92
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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