ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15m18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.... 108 2e-23
2PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... 107 2e-23
3PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (... 105 1e-22
4NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4) 30 6.1

>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)|
           (Manganese(II) purple acid phosphatase)
          Length = 464

 Score =  108 bits (269), Expect = 2e-23
 Identities = 49/75 (65%), Positives = 55/75 (73%)
 Frame = -3

Query: 642 LTYGDNYPCHDNTR*HMWVRFVERNLAYQPWISTAGNHEIGFAPEFGETKSFKPYSSRYP 463
           L+Y DNYP HDN R   W RF ER++AYQPWI TAGNHE  FAPE GET  FKPY+ RY 
Sbjct: 192 LSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYH 251

Query: 462 TPYKASGSKTP*WYT 418
            PYKAS S +P WY+
Sbjct: 252 VPYKASQSTSPFWYS 266



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>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC|
           3.1.3.2) (PAP)
          Length = 469

 Score =  107 bits (268), Expect = 2e-23
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = -3

Query: 642 LTYGDNYPCHDNTR*HMWVRFVERNLAYQPWISTAGNHEIGFAPEFGETKSFKPYSSRYP 463
           L+Y D YP HDN R   W RFVER++AYQPWI TAGNHEI F P+ GE + FKP+ +RY 
Sbjct: 198 LSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYH 257

Query: 462 TPYKASGSKTP*WYT 418
           TP+KASGS +P WY+
Sbjct: 258 TPHKASGSISPLWYS 272



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>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)|
           (PAP)
          Length = 432

 Score =  105 bits (262), Expect = 1e-22
 Identities = 47/75 (62%), Positives = 55/75 (73%)
 Frame = -3

Query: 642 LTYGDNYPCHDNTR*HMWVRFVERNLAYQPWISTAGNHEIGFAPEFGETKSFKPYSSRYP 463
           L+Y D YP HDN R   W RF ER++AYQPWI TAGNHEI FAPE  ET+ FKP+S RY 
Sbjct: 165 LSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH 224

Query: 462 TPYKASGSKTP*WYT 418
            PY+AS S +P WY+
Sbjct: 225 VPYEASQSTSPFWYS 239



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>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)|
          Length = 1176

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 302 VELQTPLMWNILTLHGDECHLYITRIGLKSFDTTREVAYVY 424
           ++L T   + I+ + G+E H+   R+GL SF + REV  +Y
Sbjct: 45  IKLDTQRQYEIVVI-GEEPHVAYNRVGLTSFFSHREVEQLY 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,584,572
Number of Sequences: 219361
Number of extensions: 1705626
Number of successful extensions: 3935
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3934
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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