ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15m07 |
|---|---|
| Clone Library Name | barley_pub |
>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2| Length = 731 Score = 39.3 bits (90), Expect = 0.012 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Frame = -3 Query: 496 MVTKEQLDARLMEEDEDFNQDITYIPEIKDPMATAVDIGEH---SFNEDSDDEEEVDKAV 326 MV KE+ + +EDED ++ ++ A AVD GE S E++DDEE+VD+ Sbjct: 595 MVEKEEEEEEEEDEDEDEEEEELAWEDVFPEEADAVDGGEEVEESDKEETDDEEDVDEEE 654 Query: 325 ALPES 311 A+P + Sbjct: 655 AVPSA 659
>MATK_SCHTR (Q95E84) Maturase K (Intron maturase)| Length = 509 Score = 35.0 bits (79), Expect = 0.23 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFDFRNV----RDVLIEVFVLFHQTCIQLFLRDHYPMLHHIR 520 I +F+ S++ S+S G RN + L++VF C+ L+L P LH++R Sbjct: 224 IFVFLCNQSSHLRSTSFGALLERNYFYGKLEYLVKVFTFTKDFCVILWLLKD-PFLHYVR 282 Query: 521 YNFRGRLMKFRTPVVNH 571 Y + L TP++ H Sbjct: 283 YRGKSILASKGTPLLMH 299
>MATK_BACCT (Q5GIR6) Maturase K (Intron maturase)| Length = 503 Score = 35.0 bits (79), Expect = 0.23 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFDFRNVRDVLIEVFV-LFHQT---CIQLFLRDHYPMLHHIR 520 I +F+ S++ S+S GIF R V IE FV +F CI F +D P +H++R Sbjct: 219 IFLFLRNKSSHLRSTSSGIFFERIYFYVKIEHFVKVFFDNDFQCILWFFKD--PFMHYVR 276 Query: 521 YNFRGRLMKFRTPVV 565 Y + L TP++ Sbjct: 277 YQGKSILASKDTPLL 291
>MATK_SYZSA (Q5GIQ4) Maturase K (Intron maturase)| Length = 505 Score = 34.7 bits (78), Expect = 0.30 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFDFRNVRDVLIEVF--VLFHQT--CIQLFLRDHYPMLHHIR 520 I +F+ S++ S+S GIF R V IE F V F CI F +D P +H++R Sbjct: 219 IFLFLRNQSSHLRSTSSGIFFERIYFYVKIEHFAKVFFDNDFQCILWFFKD--PFMHYVR 276 Query: 521 YNFRGRLMKFRTPVV 565 Y + L TP++ Sbjct: 277 YQGKSILASKDTPLL 291
>MATK_SYZAU (Q8WJ18) Maturase K (Intron maturase)| Length = 503 Score = 34.7 bits (78), Expect = 0.30 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFDFRNVRDVLIEVF--VLFHQT--CIQLFLRDHYPMLHHIR 520 I +F+ S++ S+S GIF R V IE F V F CI F +D P +H++R Sbjct: 219 IFLFLRNQSSHLRSTSSGIFFERIYFYVKIEHFAKVFFDNDFQCILWFFKD--PFMHYVR 276 Query: 521 YNFRGRLMKFRTPVV 565 Y + L TP++ Sbjct: 277 YQGKSILASKDTPLL 291
>MATK_EUCGL (Q5GIZ6) Maturase K (Intron maturase)| Length = 503 Score = 34.7 bits (78), Expect = 0.30 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +2 Query: 359 IFIERMFSNINSSSHGIFDFRNVRDVLIEVFV-LFHQT---CIQLFLRDHYPMLHHIRYN 526 +F+ S++ S+S GIF R V IE FV +F CI F +D P +H++RY Sbjct: 221 LFLRNQSSHLRSTSSGIFFERIYFYVKIEHFVKVFFDNDFQCILWFFKD--PFMHYVRYQ 278 Query: 527 FRGRLMKFRTPVV 565 + L TP++ Sbjct: 279 GKSILASKDTPLL 291
>MATK_MALDO (Q4LAM6) Maturase K (Intron maturase)| Length = 485 Score = 34.3 bits (77), Expect = 0.39 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 9/94 (9%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFD-----FRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 I +F+ S++ +S GIF + +D + EVFV I F +D P +H++ Sbjct: 219 ILLFLRNQSSHLRLTSSGIFFERIHFYEKKKDPVEEVFVNDFPAAILWFFKD--PFMHYV 276 Query: 518 RYNFRGRLMKFRTPVV----NHFIRILDVVHSWV 607 RY + L TP++ +++ L HS+V Sbjct: 277 RYQGKSILSSKDTPLLMNKWKYYLVNLWQCHSYV 310
>MATK_CUBDO (Q5GGR6) Maturase K (Intron maturase)| Length = 505 Score = 33.5 bits (75), Expect = 0.67 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIF----DFRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHIR 520 I +F+ S++ S+S G+F F + L+EVF + + LF +D P +H++R Sbjct: 222 IFVFLRNQSSHLRSTSFGVFLERIYFYVKMERLVEVFAKDFRASLWLF-KD--PFMHYVR 278 Query: 521 YNFRGRLMKFRTPVV 565 Y + L+ TP++ Sbjct: 279 YQGKSTLVSKGTPLL 293
>MATK_CHIAL (Q5GGS4) Maturase K (Intron maturase)| Length = 505 Score = 33.1 bits (74), Expect = 0.87 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIF----DFRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHIR 520 I +F+ S++ S+S G+F F + L+EVF + + LF +D P +H++R Sbjct: 222 IFVFLRNQSSHLRSTSFGVFLERIYFYGKIERLVEVFAKDFRASLWLF-KD--PFMHYVR 278 Query: 521 YNFRGRLMKFRTPVV 565 Y + L+ TP++ Sbjct: 279 YQGKSILVSKGTPLL 293
>SAS3_YEAST (P34218) Protein SAS3| Length = 831 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -3 Query: 460 EEDEDFNQDITYIPEIKDPMATAV-DIGEHSFNEDSDDEEE 341 +EDED ++D T +I+D + D E ++ EDSDD+E+ Sbjct: 755 KEDEDEDEDFTLDDDIEDEQISEENDEEEDTYEEDSDDDED 795
>PNP_BACSU (P50849) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) (Vegetative protein 15) (VEG15) Length = 704 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/66 (25%), Positives = 33/66 (50%) Frame = -3 Query: 544 HEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDITYIPEIKDPMATAVDIGEHSFN 365 HE ++ + E V KE+ + +L E DE+ N+ + + E + + A+ + E Sbjct: 208 HEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDEELNEKVKALAE--EDLLKAIQVHEKHAR 265 Query: 364 EDSDDE 347 ED+ +E Sbjct: 266 EDAINE 271
>BIP3_TOBAC (Q03683) Luminal-binding protein 3 (BiP 3) (78 kDa| glucose-regulated protein homolog 3) (GRP 78-3) (Fragment) Length = 168 Score = 31.2 bits (69), Expect = 3.3 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%) Frame = -3 Query: 610 VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDI 431 VY N + D DK+ D + E +E + E LD E ED+ + + Sbjct: 81 VYNMKNQINDKDKLADKLESDEKEK--------IETAVKEALEWLDDNQSAEKEDYEEKL 132 Query: 430 TYIPEIKDPMATAV-------DIGEHSFNEDSDDE 347 + + +P+ TAV G S ED DE Sbjct: 133 KEVEAVCNPIITAVYQRSGGASGGSSSSEEDGHDE 167
>MATK_VAUCA (Q8WJN0) Maturase K (Intron maturase)| Length = 504 Score = 31.2 bits (69), Expect = 3.3 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 15/143 (10%) Frame = +2 Query: 224 PSSL*NTPVLIHFPFNFHSXXXXXXXXXXXXGQ------CDSFVNLLLIITIFIERMFSN 385 PSSL +L+H +N++S +S V I +F+ S+ Sbjct: 170 PSSLHLLRLLLHEYYNWNSLITTKKVIFSKSNPRLFLLLYNSHVCEYESILLFLRNQSSH 229 Query: 386 INSSSHGIFD-----FRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHIRYNFRGRLMKF 550 + +S GIF + + + EVFV I F +D P +H++RY + L Sbjct: 230 LRLTSSGIFFERIHFYEKKKYPVEEVFVNDFPAAILWFFKD--PFMHYVRYQGKSILSSK 287 Query: 551 RTPVV----NHFIRILDVVHSWV 607 TP++ +++ L HS+V Sbjct: 288 DTPLLMNKWKYYLVNLWQCHSYV 310
>MATK_PRUDU (Q8WJP3) Maturase K (Intron maturase)| Length = 506 Score = 30.8 bits (68), Expect = 4.3 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 9/94 (9%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFD-----FRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 I +F+ S++ +S GIF + ++ + EVF I F +D P +H++ Sbjct: 219 ILLFLRNQSSHLQLTSSGIFFERIHFYEKIKYPVEEVFANDFPASILWFFKD--PFMHYV 276 Query: 518 RYNFRGRLMKFRTPVV----NHFIRILDVVHSWV 607 RY + L TP++ +++ L HS+V Sbjct: 277 RYQGKSILASKDTPLLMNKWKYYLVNLWQCHSYV 310
>PCSK5_RAT (P41413) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (rPC5) (PC6) (Fragment) Length = 1877 Score = 30.8 bits (68), Expect = 4.3 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Frame = -3 Query: 604 PTVNYVQ------DPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDF 443 PTV+Y D D+VI+YR ++ E + + YM + G + K + ED++ Sbjct: 1808 PTVSYSSYRSSYLDEDQVIEYRDRDYDEDDEDDIVYMGQDGTVYRKFKYGLLDEAEDDEL 1867 Query: 442 NQD 434 D Sbjct: 1868 EYD 1870
>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) Length = 1877 Score = 30.8 bits (68), Expect = 4.3 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Frame = -3 Query: 604 PTVNYVQ------DPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDED 446 PTV+Y D D+VI+YR ++ E + + YM + G + K + L++E ED Sbjct: 1808 PTVSYSSYRSSYLDEDQVIEYRDRDYDEDDEDDIVYMGQDGTVYRKFKYG--LLDETED 1864
>BIP8_TOBAC (Q03686) Luminal-binding protein 8 (BiP 8) (78 kDa| glucose-regulated protein homolog 8) (GRP 78-8) (Fragment) Length = 293 Score = 30.4 bits (67), Expect = 5.7 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Frame = -3 Query: 610 VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDI 431 VY N + D DK+ D + E +E E LD E ED+ + + Sbjct: 205 VYNMRNQINDKDKLADKLESDEKEK--------IETATKEALEWLDDNQSAEKEDYEEKL 256 Query: 430 TYIPEIKDPMATAV-------DIGEHSFNEDSDDEE 344 + + +P+ TAV GE +ED D +E Sbjct: 257 KEVEAVCNPIITAVYQKSGGAPGGESGASEDDDHDE 292
>HDAC1_DROME (Q94517) Histone deacetylase Rpd3 (HD) (dRPD3)| Length = 521 Score = 30.4 bits (67), Expect = 5.7 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = -3 Query: 385 IGEHSFNEDSDDEEEVDKAVALPES 311 I E + N++SDDE++VDK LP+S Sbjct: 382 IPEDAINDESDDEDKVDKDDRLPQS 406
>BIP_SPIOL (Q42434) Luminal-binding protein precursor (BiP) (78 kDa| glucose-regulated protein homolog) (GRP 78) Length = 668 Score = 30.4 bits (67), Expect = 5.7 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Frame = -3 Query: 610 VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDI 431 +Y N + D DK+ D + E +E + E LD E ED+++ + Sbjct: 578 IYNMKNQISDADKLADKLESDEKEK--------IEGAVKEALEWLDDNQSAEKEDYDEKL 629 Query: 430 TYIPEIKDPMATAV------DIGEHSFNEDSDDEEE 341 + + +P+ TAV GE DS+D EE Sbjct: 630 KEVEAVCNPIITAVYQRSGGPSGES--GADSEDSEE 663
>MATK_RHACA (Q85V90) Maturase K (Intron maturase)| Length = 503 Score = 30.4 bits (67), Expect = 5.7 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFDFR-----NVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 I +F+ FS++ +S G+F R ++ + EVF ++F +D P +H++ Sbjct: 219 ILLFLRNQFSHLRLTSSGVFFERIYFYGKIKHPVEEVFANDFPAIRRVF-KD--PFMHYV 275 Query: 518 RYNFRGRLMKFRTPVVNHFIRILDVVHSW 604 RY + L+ TP++ + + +VH W Sbjct: 276 RYQGKSFLVSKDTPLLMNKWKYY-LVHLW 303
>BIP4_TOBAC (Q03684) Luminal-binding protein 4 precursor (BiP 4) (78 kDa| glucose-regulated protein homolog 4) (GRP 78-4) Length = 667 Score = 30.4 bits (67), Expect = 5.7 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Frame = -3 Query: 610 VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDI 431 VY N + D DK+ D + E +E E LD E ED+ + + Sbjct: 579 VYNMRNQINDKDKLADKLESDEKEK--------IETATKEALEWLDDNQSAEKEDYEEKL 630 Query: 430 TYIPEIKDPMATAV-------DIGEHSFNEDSDDEE 344 + + +P+ TAV GE +ED D +E Sbjct: 631 KEVEAVCNPIITAVYQKSGGAPGGESGASEDDDHDE 666
>MATK_PRULA (Q8WJP2) Maturase K (Intron maturase)| Length = 500 Score = 30.0 bits (66), Expect = 7.4 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 9/94 (9%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFD-----FRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 I +F+ S++ S GIF + ++ + EVF I F +D P +H++ Sbjct: 215 ILLFLRNQSSHLQLISSGIFFERIHFYEKIKYPVEEVFANDFPAAILWFFKD--PFMHYV 272 Query: 518 RYNFRGRLMKFRTPVV----NHFIRILDVVHSWV 607 RY + L TP++ +++ L HS+V Sbjct: 273 RYQGKSILASKDTPLLMNKWKYYLVNLWQCHSYV 306
>BIP2_TOBAC (Q03682) Luminal-binding protein 2 (BiP 2) (78 kDa| glucose-regulated protein homolog 2) (GRP 78-2) (Fragment) Length = 292 Score = 29.6 bits (65), Expect = 9.7 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 2/94 (2%) Frame = -3 Query: 610 VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDI 431 VY N + D DK+ D + E +E E LD E ED+ + + Sbjct: 202 VYNMKNQINDKDKLADKLESDEKEK--------IETATKEALEWLDDNQSAEKEDYEEKL 253 Query: 430 TYIPEIKDPMATAV--DIGEHSFNEDSDDEEEVD 335 + + +P+ TAV G S++EEE D Sbjct: 254 KEVEAVCNPIITAVYQRSGGAPGGGSSEEEEEED 287
>GRPE_STAHJ (Q4L6T1) Protein grpE (HSP-70 cofactor)| Length = 208 Score = 29.6 bits (65), Expect = 9.7 Identities = 26/116 (22%), Positives = 44/116 (37%) Frame = -3 Query: 460 EEDEDFNQDITYIPEIKDPMATAVDIGEHSFNEDSDDEEEVDKAVALPESLXXXXXXXXX 281 EE E N+D + + ++D + + + S NE+S +E VD + L Sbjct: 16 EEQEVKNEDTSTVENVEDTTSDSDNSSNDSSNEESSEETAVDPKDEEIQQLQLKANENEE 75 Query: 280 XXXXXXXVNQNWSVLKTTGQDEKPKEKLKKDQMTLKDAINESENLTDFLMDFEEDE 113 +N+ K Q E K + Q L D + +N+ L +DE Sbjct: 76 KYLRLYAEFENY---KRRIQKENETNKTYQSQRVLTDILPTIDNIERALQIEGDDE 128
>BIP5_TOBAC (Q03685) Luminal-binding protein 5 precursor (BiP 5) (78 kDa| glucose-regulated protein homolog 5) (GRP 78-5) Length = 668 Score = 29.6 bits (65), Expect = 9.7 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Frame = -3 Query: 610 VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEHGIMVTKEQLDARLMEEDEDFNQDI 431 VY N + D DK+ D + E +E E LD E ED+++ + Sbjct: 578 VYNMRNQINDKDKLADKLESDEKEK--------IETATKEALEWLDDNQSAEKEDYDEKL 629 Query: 430 TYIPEIKDPMATAV---------DIGEHSFNEDSDDEEEV 338 + + +P+ TAV E S NED D +E+ Sbjct: 630 KEVEAVCNPIITAVYQRSGGAPGGASEES-NEDDDSHDEL 668
>MATK_ASTSI (Q5D1C1) Maturase K (Intron maturase)| Length = 508 Score = 29.6 bits (65), Expect = 9.7 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHGIFD----FRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHIR 520 I +F+ + S++ S +F F R+ L+EVF + + LF +D P++H++R Sbjct: 224 IFLFLRKKSSHLRFKSFSVFFERIFFYAKREHLVEVFAKDFSSTLTLF-KD--PLIHYVR 280 Query: 521 YNFRGRLMKFRTPVV 565 Y + L P++ Sbjct: 281 YQGKSILASKNAPLL 295
>ERG_ANTMA (O82626) GTP-binding protein ERG| Length = 423 Score = 29.6 bits (65), Expect = 9.7 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%) Frame = -3 Query: 664 LAMRMREDQIKQIWGGDP------VYPTVNYVQDPDKVIDYRSPEFHEPTPEVVPYMMEH 503 LA + E +K+ W DP V ++ +K++DY E +PY +EH Sbjct: 306 LAQYLTEQAVKRPWDEDPFAMSEEVMKNISLEVVREKLLDYVHQE--------IPYGIEH 357 Query: 502 GIMVTKEQLDARLMEE 455 +M KE D L E Sbjct: 358 RLMGWKELRDGSLRIE 373
>VL2_HPV27 (P36755) Minor capsid protein L2| Length = 464 Score = 29.6 bits (65), Expect = 9.7 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -3 Query: 595 NYVQDPDKVIDYRSPEFHE-PTPEVVPYMMEHGIMVTKEQ 479 N V DP++ I ++ P+FHE P P+ + + H +T Q Sbjct: 253 NPVYDPEETIIFQHPDFHEPPDPDFLDIVALHRPALTSRQ 292
>MATK_HAMVI (Q9MT47) Maturase K (Intron maturase)| Length = 504 Score = 29.6 bits (65), Expect = 9.7 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHG-----IFDFRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 I +F S + S+S G I+ + ++ L+EVFV Q + LF +D P +H++ Sbjct: 221 IFLFFRNQSSYLRSTSSGALLERIYFYGKIKH-LVEVFVNDFQAILWLF-KD--PFMHYV 276 Query: 518 RYNFRGRLMKFRTPVV 565 RY + L TP++ Sbjct: 277 RYQGKSILASKGTPLL 292
>MATK_HAMJA (Q9GGJ8) Maturase K (Intron maturase)| Length = 504 Score = 29.6 bits (65), Expect = 9.7 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHG-----IFDFRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 I +F S + S+S G I+ + ++ L+EVFV Q + LF +D P +H++ Sbjct: 221 IFLFFRNQSSYLRSTSSGALLERIYFYGKIKH-LVEVFVNDFQAILWLF-KD--PFMHYV 276 Query: 518 RYNFRGRLMKFRTPVV 565 RY + L TP++ Sbjct: 277 RYQGKSILASKGTPLL 292
>MATK_BETPA (Q67BD8) Maturase K (Intron maturase)| Length = 504 Score = 29.6 bits (65), Expect = 9.7 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Frame = +2 Query: 353 ITIFIERMFSNINSSSHG-----IFDFRNVRDVLIEVFVLFHQTCIQLFLRDHYPMLHHI 517 + +F+ +++ +S G I+ R + D L+EVFV Q I FL+D P +H++ Sbjct: 221 VFLFLRNQSNHLRLTSSGVLFERIYLHRKMED-LVEVFVNDFQG-ILCFLKD--PFIHYV 276 Query: 518 RYNFRGRLMKFRTPVV 565 RY + L TP++ Sbjct: 277 RYQGKSILASKDTPLL 292 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,364,698 Number of Sequences: 219361 Number of extensions: 1571691 Number of successful extensions: 5335 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5317 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
