ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15m01 |
|---|---|
| Clone Library Name | barley_pub |
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 132 bits (332), Expect = 1e-30 Identities = 77/172 (44%), Positives = 100/172 (58%), Gaps = 8/172 (4%) Frame = -2 Query: 704 VPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRP--LPTVP----VARFWAAYIDQN 543 VPVL+H G P+ ES + P A RP +P+ P VARFWAAY+D Sbjct: 56 VPVLLHAGRPVNESQVIVQYIDEVWPGG----AGGRPSVMPSDPYERAVARFWAAYVDDK 111 Query: 542 LVAPWWKMFVG-KTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGG 366 + W + G KT++E+ Q +AA+E LE A ECS GKPFFGGD VG++DVVLGG Sbjct: 112 VRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGG 171 Query: 365 MVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLP-DIDRLVEF 213 + W + L G L+D +TP L AW ERF + AK V+P D D+L+EF Sbjct: 172 YLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEF 223
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 85.9 bits (211), Expect = 1e-16 Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 7/179 (3%) Frame = -2 Query: 707 KVPVLI-HNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVP----VARFWAAYIDQN 543 K+PVL+ +G ICES + A LP P + RFW A+ID Sbjct: 50 KIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDK 109 Query: 542 LVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNV--GYIDVVLG 369 + + T + + + T AA+ LE A ++ S+G+ FF G + G +D+ LG Sbjct: 110 FWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALG 169 Query: 368 GMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRAQ 192 + ++ E L GL L+DA+ TPLL W +RF AK VLPD +++V+F + + Q Sbjct: 170 CFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFLQVQ 228
>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) Length = 219 Score = 83.6 bits (205), Expect = 6e-16 Identities = 54/162 (33%), Positives = 85/162 (52%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVPVARFWAAYIDQNLVAPW 528 K+PVLIHNG PICES A + + + D++ P P ARFW YID+ + W Sbjct: 53 KIPVLIHNGKPICES-AIIVQYIDEVWNDKSPLMPSDPYKR-SQARFWVDYIDKKIYDTW 110 Query: 527 WKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMVAWMQ 348 KM++ K +E EG K+ ++ ++LE L + KPF+G D G++D+ L +W Sbjct: 111 KKMWLSK-GEEHEEGKKELISIFKQLEETLTD----KPFYGDDTFGFVDLCLITFSSWFY 165 Query: 347 GTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRL 222 E ++ + + P L+AW++R E LPD ++ Sbjct: 166 TYETYGNFKMEE--ECPKLMAWVKRCMERETVSNTLPDAKKV 205
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 82.4 bits (202), Expect = 1e-15 Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 4/179 (2%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVPV----ARFWAAYIDQNL 540 K+PVLIHNG PICES+ + + + +D+ AP LP+ P ARFWA YID+ L Sbjct: 54 KIPVLIHNGKPICESIIAV-EYIEEVWKDK---AP-NLLPSDPYDRAQARFWADYIDKKL 108 Query: 539 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMV 360 K++ K +E+ K + ++ LE AL + KP+FGG++ G++D+ L G Sbjct: 109 YDFGRKLWTTK-GEEQEAAKKDFIECLKVLEGALGD----KPYFGGESFGFVDIALIGYY 163 Query: 359 AWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRAQKAL 183 +W E + P +AW +R E LPD +++EF K+ R + L Sbjct: 164 SWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGL 220
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 81.3 bits (199), Expect = 3e-15 Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 4/179 (2%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVPV----ARFWAAYIDQNL 540 K+PVLIHNG PICES+ + + + +D+ AP LP+ P ARFWA YID+ L Sbjct: 54 KIPVLIHNGKPICESIIAV-EYIEEVWKDK---AP-SLLPSDPYDRAQARFWADYIDKKL 108 Query: 539 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMV 360 K++ K +E+ K + ++ LE AL + +P+FGG++ G++D+ L G Sbjct: 109 YDFGRKLWATK-GEEQEAAKKDFIECLKVLEGALGD----RPYFGGESFGFVDIALIGFY 163 Query: 359 AWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRAQKAL 183 +W E + P +AW +R E LPD +++EF K+ R + L Sbjct: 164 SWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGL 220
>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat| shock protein 26A) (G2-4) Length = 225 Score = 80.9 bits (198), Expect = 4e-15 Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 7/176 (3%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVP-------VARFWAAYID 549 KVPV +HN PI ESL + + W+ P +P +ARFW+ +ID Sbjct: 56 KVPVFVHNEQPIAESLVIV----------EYIDETWKNNPILPSDPYQRALARFWSKFID 105 Query: 548 QNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLG 369 +V K +KE+ + ++T A++ LE L++ K FFGG+ G +D+ Sbjct: 106 DKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKD----KKFFGGEEFGLVDIAAV 161 Query: 368 GMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMK 201 + W+ + + GL+L + K P+L W + F VLP D L + K + Sbjct: 162 FIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKAR 217
>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)| (Auxin-regulated protein parA) (STR246C protein) Length = 220 Score = 69.3 bits (168), Expect = 1e-11 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 8/173 (4%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRP----LPTVPV----ARFWAAYI 552 K+P+LIHN ICESL L + W LP+ P ARFWA YI Sbjct: 54 KIPILIHNSKAICESLNIL----------EYIDEVWHDKCPLLPSDPYERSQARFWADYI 103 Query: 551 DQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVL 372 D+ + + +++ GK + ++ E K+ + ++ LE L K +FGGDN+G++DV L Sbjct: 104 DKKIYSTGRRVWSGKGE-DQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVAL 158 Query: 371 GGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 213 +W E + + P L+ W + E LP ++ F Sbjct: 159 VPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209
>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)| (Auxin-regulated protein MSR-1) Length = 219 Score = 69.3 bits (168), Expect = 1e-11 Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 4/169 (2%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVPV----ARFWAAYIDQNL 540 K+P+LIHNG PICESL L D LP+ P ARFWA YID + Sbjct: 54 KIPILIHNGKPICESLNILEY------IDEVWHEKCPLLPSDPYQRSQARFWANYIDNKI 107 Query: 539 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMV 360 + +++ GK +++ E K+ + + LE L K +FGGDN+G++DV L Sbjct: 108 YSTGRRVWSGK-GEDQEEAKKEFIEIFKTLEGEL----GNKTYFGGDNLGFVDVALVPFT 162 Query: 359 AWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 213 +W E + + L+ W +K+ LP ++ +F Sbjct: 163 SWFYSYETCANFSI--EAECRKLVVWQNCMENERVSKS-LPHPHKIYDF 208
>GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT35/PCNT111) Length = 223 Score = 65.5 bits (158), Expect = 2e-10 Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 4/173 (2%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVP----VARFWAAYIDQNL 540 KVPVLIHNG PI ES+ L D T P LP P +ARFWA ++D + Sbjct: 52 KVPVLIHNGKPIVESMIILEYI------DETFEGP-SILPKDPYDRALARFWAKFLDDKV 104 Query: 539 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMV 360 A F + +E+ +G ++ ++ L+ L++ K FF GD G+ D+ + Sbjct: 105 AAVVNTFF--RKGEEQEKGKEEVYEMLKVLDNELKD----KKFFAGDKFGFADIAANLVG 158 Query: 359 AWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMK 201 W+ E G L+ + K P W + + LP D L+ F + + Sbjct: 159 FWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRAR 211
>GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.1.18)| (Pathogenesis-related protein 1) Length = 217 Score = 65.1 bits (157), Expect = 2e-10 Identities = 47/146 (32%), Positives = 67/146 (45%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVPVARFWAAYIDQNLVAPW 528 K+PVLIHNG ICES+ L LP P +ARFWA Y++ A W Sbjct: 52 KIPVLIHNGKCICESMVILEYIDEAFEGPSILPKD--PYDRA-LARFWAKYVEDKGAAVW 108 Query: 527 WKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMVAWMQ 348 K F K ++++ K A E L++ E K F G D G+ D+V G ++ Sbjct: 109 -KSFFSKGEEQE----KAKEEAYEMLKILDNEFKDKKCFVG-DKFGFADIVANGAALYLG 162 Query: 347 GTEALCGLELLDATKTPLLLAWMERF 270 E + G+ L + K P AW + + Sbjct: 163 ILEEVSGIVLATSEKFPNFCAWRDEY 188
>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT103) Length = 223 Score = 65.1 bits (157), Expect = 2e-10 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 4/173 (2%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVP----VARFWAAYIDQNL 540 KVPVLIHNG PI ES+ L D T P LP P +ARFW+ ++ + Sbjct: 52 KVPVLIHNGKPIVESMVILEY------IDETFEGP-SILPKDPYDRALARFWSKFLGDKV 104 Query: 539 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMV 360 A F + +E+ +G ++ ++ L+ L++ K FF GD G+ D+ + Sbjct: 105 AAVVNTFF--RKGEEQEKGKEEVYEMLKVLDNELKD----KKFFVGDKFGFADIAANLVG 158 Query: 359 AWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMK 201 W+ E G+ L+ + K P W + + K LP D L+ F + + Sbjct: 159 FWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRAR 211
>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT1/PCNT110) Length = 223 Score = 63.2 bits (152), Expect = 8e-10 Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 4/173 (2%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWRPLPTVP----VARFWAAYIDQNL 540 KVPVLIHNG I ES+ L D T P LP P +ARFWA ++D + Sbjct: 52 KVPVLIHNGKRIVESMVILEY------IDETFEGP-SILPKDPYDRALARFWAKFLDDKV 104 Query: 539 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMV 360 A K F+ K +E+ + ++ ++ L+ L++ K FF GD G+ D+ + Sbjct: 105 PAV-VKTFLRK-GEEQEKDKEEVCEMLKVLDNELKD----KKFFVGDKFGFADIAANLVA 158 Query: 359 AWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMK 201 W+ E G+ L+ + K P W + K LP D L+ F + + Sbjct: 159 FWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSR 211
>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)| Length = 224 Score = 59.7 bits (143), Expect = 9e-09 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 3/167 (1%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPA-PWRPLPTVPVARFWAAYIDQNLVAP 531 KVPVL+HNG I ES L P++ LP P+ ARF+A +D+ ++ Sbjct: 55 KVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSK----ARFFAKLVDEQIMNV 110 Query: 530 WWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMVAWM 351 + +K + +Q + LE L GK +FGG VG++D V G ++ + Sbjct: 111 GFISMARADEKGREVLAEQVRELIMYLEKEL----VGKDYFGGKTVGFLDFVAGSLIPFC 166 Query: 350 --QGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVE 216 +G E + GLE++ K P W+ +E K +P + VE Sbjct: 167 LERGWEGI-GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVE 212
>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)| Length = 231 Score = 57.4 bits (137), Expect = 4e-08 Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 13/178 (7%) Frame = -2 Query: 707 KVPVLIHNGVPICESLAHLGVHRRGLPRDRTLPAPWR-----PLPTVPVARFWAAYIDQN 543 K+PVL+H G P+ ESL L P L P ARFWA Y+D+ Sbjct: 55 KIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRK 114 Query: 542 LV---APWWKMFVGKTDKEKHEGTKQTLAAVEKLEV--ALRECSSGKPFF---GGDNVGY 387 L + W++ +G Q A E E+ L + FF GG +G+ Sbjct: 115 LYDCGSRLWRL----------KGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGF 164 Query: 386 IDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 213 +DV L AW E G + + P L AW R G ++ LP +++ +F Sbjct: 165 VDVALVPFTAWFYSYERCGGFSVEEV--APRLAAWARRCGRIDSVVKHLPSPEKVYDF 220
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 33.1 bits (74), Expect = 0.85 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Frame = +1 Query: 211 ANSTNL-SISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPP-NTTS 384 A+ST L S++ TA + S P S++++S ++ + S + + +T P NT+S Sbjct: 354 ASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSS 413 Query: 385 M*PTLSPPKNGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLP 513 + PT S +S ATS+ ST S + S S P Sbjct: 414 VLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTP 456 Score = 32.0 bits (71), Expect = 1.9 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Frame = +1 Query: 211 ANSTNL-SISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPP-NTTS 384 A+ST L S++ TA + S P S++++S ++ + S + + +T P NT+S Sbjct: 468 ASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSS 527 Query: 385 M*PTLSPPKNGFPLEHSLRATSSFST 462 + PT S +S ATS+ ST Sbjct: 528 VLPTSSVSSTPLSSANSTTATSASST 553
>DAG1_BOVIN (O18738) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +2 Query: 143 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 313 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVAVTQSHWPSEPSEAVRDWENQLEASMHSALSDLHETVPTVVGIPDGTAVVGRSFR 79 Query: 314 QGAP 325 P Sbjct: 80 VTIP 83
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +2 Query: 143 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 313 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVVMAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEAVPTVVGIPDGTAVVGRSFR 79 Query: 314 QGAP 325 P Sbjct: 80 VTIP 83
>INO80_CANAL (Q59KI4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1387 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +1 Query: 319 SSRPQSASVPCIHATIP-PNTTSM*PTLSPPKNGFPLEHSLRATSSFSTAASVCFVPSCF 495 SS Q +S+P + T+ TT+ T P N PL+HS+ S+ +T +S+ + Sbjct: 63 SSNQQHSSIPPVGTTVEHATTTTTTATNHQPVNSSPLKHSVDENSNPTTISSLKKDTNSI 122 Query: 496 SLSVLP 513 S+LP Sbjct: 123 IASILP 128
>DAG1_MOUSE (Q62165) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 893 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +2 Query: 143 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 313 LLL + + +H+ EPSE V W+ Q + L++ VP P AV G +R Sbjct: 18 LLLSVAVAQAHWPSEPSEAVRDWKNQLEASMHSVLSDFQEAVPTVVGIPDGTAVVGRSFR 77 Query: 314 QGAP 325 P Sbjct: 78 VSIP 81
>PAX2A_BRARE (Q90268) Paired box protein Pax-2a (Pax[Zf-b]) (No isthmus protein)| Length = 410 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = -3 Query: 667 SHSPILEYIDEVYRGTGPCLLPGDPYQPCPSLGSGPPTLIRI*SRH 530 SH Y +E +R + P LL Y S GSGPPT RH Sbjct: 366 SHPQYTTY-NEAWRFSNPALLSSPYYYSAASRGSGPPTAATAYDRH 410
>RA51C_HUMAN (O43502) DNA repair protein RAD51 homolog 3| Length = 376 Score = 30.8 bits (68), Expect = 4.2 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 34/119 (28%) Frame = -2 Query: 464 AVEKLEVALRECSSGKPFFGGDNVGY------------------------IDVVLGGMVA 357 A+E L++ REC + KP + G + + +D +LGG V Sbjct: 57 ALETLQIIRRECLTNKPRYAGTSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVP 116 Query: 356 WMQGTEALCGLELLDATKTPLLLA----WMERFGGMEPAKAVLPD------IDRLVEFA 210 M+ TE +CG + T+ + LA E FGG+ +AV D +DR+V+ A Sbjct: 117 LMKTTE-ICGAPGVGKTQLCMQLAVDVQIPECFGGV-AGEAVFIDTEGSFMVDRVVDLA 173
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 30.8 bits (68), Expect = 4.2 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = +1 Query: 247 ALAGS-IPPKRSIHA-SSNGVLVASRSSRPQSASVPCIHA 360 AL GS I K SI+ ++ ++VA RS +PQ AS PC HA Sbjct: 1702 ALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHA 1741
>MAVS_RAT (Q66HG9) Mitochondrial antiviral signaling protein (Interferon-beta| promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) Length = 507 Score = 30.8 bits (68), Expect = 4.2 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 5/114 (4%) Frame = +1 Query: 208 LANSTNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHAT--IPPN-- 375 +A TNLS G T A + K ++ +SS G A + + Q+ + C+ +P N Sbjct: 231 IAPRTNLS-PGVTVSA--LSAKTTLSSSSTGSAFA-KGAGDQAKAATCVSTKEGVPTNSV 286 Query: 376 TTSM*PTLSP-PKNGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLPTNIFHHG 534 TTS P++ P P N S S+ STAA+ VP+ + S LP N + G Sbjct: 287 TTSSVPSIKPVPVNTMS---SKLPISTKSTAATPSTVPTNIAPSKLPINSVYTG 337
>GA2L2_MOUSE (Q5SSG4) GAS2-like protein 2 (Growth arrest-specific 2-like 2)| Length = 860 Score = 30.4 bits (67), Expect = 5.5 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Frame = +1 Query: 235 SGRTALAG-SIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*P-TLSPP 408 S RT+ G S PP+ S AS + + V + + PQ + +H++ P + P LSP Sbjct: 440 SKRTSARGPSPPPRSSSLASPHMIWVLHQGASPQLSEPMTVHSSSPGKGLTKIPIRLSPA 499 Query: 409 KNGFPLEHSLRATSSFST 462 + P SL +ST Sbjct: 500 RPPTPGRSSLGTEGEYST 517
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 30.4 bits (67), Expect = 5.5 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +2 Query: 143 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 313 LLL + + SH+ EPSE V W+ Q + L++L +P P AV G +R Sbjct: 20 LLLCVAVAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEALPTVVGIPDGTAVVGRSFR 79 Query: 314 QGAP 325 P Sbjct: 80 VTIP 83
>TS101_HUMAN (Q99816) Tumor susceptibility gene 101 protein| Length = 390 Score = 30.4 bits (67), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = +1 Query: 322 SRPQSASVPCIHATIPPNTT---SM*PTLSPPKNGFP 423 SRP SAS P AT PPNT+ M +SP +G+P Sbjct: 143 SRPISASYPPYQATGPPNTSYMPGMPGGISPYPSGYP 179
>WDR67_HUMAN (Q96DN5) WD-repeat protein 67| Length = 1066 Score = 27.7 bits (60), Expect(2) = 6.6 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -3 Query: 664 HSPILEYIDEVYRGTGPCLLPGD 596 H +L +++ + GTG CL+ GD Sbjct: 39 HPKVLRFLNVAFDGTGDCLIAGD 61 Score = 20.8 bits (42), Expect(2) = 6.6 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = -2 Query: 479 KQTLAAVEKLEVALRECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEA 336 ++T A L LR S ++ D V +V+WM+G E+ Sbjct: 80 QRTAQACTALAFNLRRKSEFLVALADYSIKCFDTVTKELVSWMRGHES 127
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 30.0 bits (66), Expect = 7.2 Identities = 24/90 (26%), Positives = 41/90 (45%) Frame = +1 Query: 235 SGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPKN 414 SG + + SIP +++ + ++ SS P S V ++ T++ TL PP + Sbjct: 140 SGHASASTSIPSTAITVTANSTIYSSATSSFPYSTDV-----SVSTGTSTDIVTLPPPAS 194 Query: 415 GFPLEHSLRATSSFSTAASVCFVPSCFSLS 504 +TSSFST + +PS S + Sbjct: 195 ---------STSSFSTITNTSMIPSSSSFT 215
>YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5| Length = 1216 Score = 30.0 bits (66), Expect = 7.2 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +1 Query: 286 ASSN--GVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPK----NGFPLEHSLRAT 447 AS N G ++A R S + S+ C+ P TT+ T + PK + P + AT Sbjct: 964 ASQNLIGSMIAYRESTIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAIAT 1023 Query: 448 SSFSTAASVCFVPS 489 + ST C + S Sbjct: 1024 TDVSTRPRSCDINS 1037
>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2| Length = 906 Score = 29.6 bits (65), Expect = 9.4 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -1 Query: 582 ARRSVLGRLH*SESSRAMVEDVR----GQNGQGET*RDEADARSSGEARGGPKG 433 A + G+LH S + RA +VR G+ G + R + R S +A GP G Sbjct: 260 ATKRFAGQLHLSAADRARRSNVRGKPTGRPGSSSSRRGNDNGRGSNQANSGPHG 313
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.6 bits (65), Expect = 9.4 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Frame = +1 Query: 286 ASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPKNGFPLEHSLRATSSFSTA 465 +S++G ++ S S+S P T PP T+S SPP + S +T S STA Sbjct: 33 SSTSGSGQSTSSGTTNSSSSP---TTSPPTTSS-----SPPTSTHTSSPSSTSTQSSSTA 84 Query: 466 ASVCFVPS-CFSLSVLPTN 519 A+ PS S + +PT+ Sbjct: 85 ATSSSAPSTASSTTSIPTS 103
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.6 bits (65), Expect = 9.4 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Frame = +1 Query: 286 ASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPKNGFPLEHSLRATSSFSTA 465 +S++G ++ S S+S P T PP T+S SPP + S +T S STA Sbjct: 33 SSTSGSGQSTSSGTTNSSSSP---TTSPPTTSS-----SPPTSTHTSSPSSTSTQSSSTA 84 Query: 466 ASVCFVPS-CFSLSVLPTN 519 A+ PS S + +PT+ Sbjct: 85 ATSSSAPSTASSTTSIPTS 103
>LAMP2_CRIGR (P49130) Lysosome-associated membrane glycoprotein 2 precursor| (LAMP-2) (Lysosomal membrane glycoprotein B) (LGP B) (CD107b antigen) Length = 410 Score = 29.6 bits (65), Expect = 9.4 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 346 PCIHATIPPNTTSM*PTLSPPKNG 417 P IH T+PP TT+ PT PPK G Sbjct: 200 PIIHTTVPPPTTT--PTPLPPKVG 221 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 113,292,081 Number of Sequences: 219361 Number of extensions: 2634328 Number of successful extensions: 8188 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 7518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8145 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
