ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16a22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 1199 bits (605), Expect = 0.0 Identities = 652/664 (98%), Gaps = 3/664 (0%) Strand = Plus / Minus Query: 1 ccctttncttaacaatncacacatacttaattgacaacagtagnaataaaatcaccaagt 60 |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1051 ccctttacttaacaat-cacacatacttaattgacaacagtag-aataaaatcaccaagt 994 Query: 61 agnattctgggacacatggtagggaacatcacataacaccaatccagctacacacagata 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ag-attctgggacacatggtagggaacatcacataacaccaatccagctacacacagata 935 Query: 121 gattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 gattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatcca 875 Query: 181 gctaataattgaaaacattatatatctaagaaaccacagcacactgcaagaacaccatcc 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 874 gctaataattgaaaacattatatatctaagaaaccatagcacactgcaagaacaccatcc 815 Query: 241 ttatggcatcatagtcttcctcttactgccccatgtttagctcttgttcttgtacttgtc 300 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 814 ttgtggcatcatagtcttcctcttactgccccatctttagctcttgttcttgtacttgtc 755 Query: 301 cttggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgca 360 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 754 cttggcccttggtgcaagaccgatggcttcggaccccttcatgatcctcaagcgtttgca 695 Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 694 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtctccatccttgtc 635 Query: 421 ttcgtaagtagtaacaacatctgaaccgttcactgcctcaaccatcttcccctcattccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 ttcgtaagtagtaacaacatctgaaccgttcactgcctcaaccatcttcccctcattccc 575 Query: 481 agttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtgtt 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 574 agttgcggtgaaggtgctgaacatcttctgcagagcaatggagaggtccttgtaggtgtt 515 Query: 541 gtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgacaaa 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgacaaa 455 Query: 601 gttggagccgttggcgccagcagcagcggtagcagcaggctgctgcttctcggtctcctc 660 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 454 gttggagccgttggcaccagcagcagcggcagcagcaggctgctgcttctcggtctcctc 395 Query: 661 ctcc 664 |||| Sbjct: 394 ctcc 391
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 394 bits (199), Expect = e-106 Identities = 353/401 (88%), Gaps = 5/401 (1%) Strand = Plus / Minus Query: 45 aataaaatcaccaagtagnattctgggacacatggtagggaacatcacataacaccaatc 104 |||||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1103 aataaaatcatcaagtag-atcttgggacacacggtaggggacatcacataacaccaatc 1045 Query: 105 cagctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactct 164 |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 1044 cagctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactct 985 Query: 165 cccttcttttaatccagctaataattgaaaacattatatatctaag-aaaccacagcaca 223 |||||||||||||||||||| | ||||| |||||| |||||| |||||| | |||| Sbjct: 984 tccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacaca 925 Query: 224 ctgcaagaacaccatccttatggcatcatagtcttcctctta---ctgccccatgtttag 280 ||||||||||||||| ||||||||| ||| || | ||||| |||| ||| || || Sbjct: 924 ctgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcag 865 Query: 281 ctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttc 340 ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 864 ctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacccttc 805 Query: 341 atgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagc 400 ||||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||||| Sbjct: 804 atgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaacaagc 745 Query: 401 atccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 |||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 744 atccagtcaccatccttgtcttcataagttgtaacagcatc 704 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 476 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 535 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 678 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 619 Query: 536 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 618 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 560
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 389 bits (196), Expect = e-105 Identities = 334/378 (88%), Gaps = 4/378 (1%) Strand = Plus / Minus Query: 68 tgggacacatggtagggaacatcacataacaccaatccagctacacacagatagattatt 127 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1086 tgggacacacggtaggggacatcacataacaccaatccagctacacacaaatagattatt 1027 Query: 128 gcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatccagctaata 187 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1026 gcttctggtccataaacaaattaaacatgacaactcttccttcttttaatccagctaaac 967 Query: 188 attgaaaacattatatatctaag-aaaccacagcacactgcaagaacaccatccttatgg 246 | ||||| |||||| |||||| |||||| | ||||||||||||||||||| ||||||| Sbjct: 966 aagtaaaaccttatatttctaaggaaaccataacacactgcaagaacaccattcttatgg 907 Query: 247 catcatagtcttcctctta---ctgccccatgtttagctcttgttcttgtacttgtcctt 303 || ||| || | ||||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 906 caccatgctcagcatcttaatactgcaacattttcagctcttgttcttgtacttgtcctt 847 Query: 304 ggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatga 363 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tgctcttggtgcaagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatga 787 Query: 364 agcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 | |||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 786 ctcgacaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttc 727 Query: 424 gtaagtagtaacaacatc 441 ||||| |||||| |||| Sbjct: 726 ataagttgtaacagcatc 709 Score = 151 bits (76), Expect = 3e-33 Identities = 110/120 (91%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 476 ttcccagttgcgg-tgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgta 534 ||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||| Sbjct: 683 ttcccagttgcgggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgta 624 Query: 535 ggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 | ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 623 gctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 564
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 361 bits (182), Expect = 2e-96 Identities = 324/368 (88%), Gaps = 5/368 (1%) Strand = Plus / Minus Query: 45 aataaaatcaccaagtagnattctgggacacatggtagggaacatcacataacaccaatc 104 |||||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||||| Sbjct: 371 aataaaatcatcaagtag-atcttgggacacacggtaggggacatcacataacaccaatc 313 Query: 105 cagctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactct 164 |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 312 cagctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactct 253 Query: 165 cccttcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcaca 223 |||||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||| Sbjct: 252 tccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacaca 193 Query: 224 ctgcaagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttag 280 ||||||||||||||| ||||||||| ||| || | ||| |||||| ||| || || Sbjct: 192 ctgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcag 133 Query: 281 ctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttc 340 ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 132 ctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacccttc 73 Query: 341 atgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagc 400 ||||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||||| Sbjct: 72 atgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaacaagc 13 Query: 401 atccagtc 408 |||||||| Sbjct: 12 atccagtc 5
>gb|AY847064.1| Avena sativa Aux/IAA3 mRNA, partial cds Length = 360 Score = 333 bits (168), Expect = 4e-88 Identities = 219/236 (92%) Strand = Plus / Minus Query: 403 ccagtcgccatccttgtcttcgtaagtagtaacaacatctgaaccgttcactgcctcaac 462 |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 360 ccagtctccgtccttgtcttcgtaagtagtaacaacatctgaaccattcactgcctcaac 301 Query: 463 catcttcccctcattcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatgga 522 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 300 catcttcccctcattcccagttgcggtgaaggtgctgaacatcttctgcagtgcaatgga 241 Query: 523 gaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtc 582 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 240 gaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggtagggcgcaccgtc 181 Query: 583 catgctcaccttgacaaagttggagccgttggcgccagcagcagcggtagcagcag 638 |||||||||||| |||||| ||||||||| | || |||| ||| | |||||||| Sbjct: 180 catgctcaccttcacaaaggcagagccgttgccaccggcagtagcagcagcagcag 125 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 634 agcaggctgctgcttctcggtctcctc 660 ||||||||||||||||||||| ||||| Sbjct: 108 agcaggctgctgcttctcggtttcctc 82
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 321 bits (162), Expect = 2e-84 Identities = 297/340 (87%), Gaps = 4/340 (1%) Strand = Plus / Minus Query: 94 taacaccaatccagctacacacagatagattattgcttctggtccaccaacaaattaaac 153 ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 1050 taacaccaatccagctacacacaaatggattattgcttctggtccataaacaaattaaac 991 Query: 154 atggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaag-aa 212 ||| ||||||| ||||| |||||||||||||| | ||||| |||||| |||||| || Sbjct: 990 atgacaactcttccttcctttaatccagctaaacaagtaaaaccttatatttctaaggaa 931 Query: 213 accacagcacactgcaagaacaccatccttatggcatcatagtcttcctctta---ctgc 269 |||| | ||||||||||||||||||| |||||||| ||| || | ||||| |||| Sbjct: 930 accataacacactgcaagaacaccatttttatggcaccatgctcagcatcttaatactgc 871 Query: 270 cccatgtttagctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggctt 329 ||| || ||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct: 870 aacattttcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggctt 811 Query: 330 cggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgt 389 |||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||| | Sbjct: 810 cggaacccttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacat 751 Query: 390 ctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 750 ctccaacaagcatccagtcaccatccttgtcttcataagt 711 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 476 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 535 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 673 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 614 Query: 536 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 613 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 555
>gb|AY622360.1| Psathyrostachys juncea clone RW-150 EST-SRR marker sequence Length = 174 Score = 272 bits (137), Expect = 1e-69 Identities = 151/155 (97%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 115 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 114 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcaccagcagcagcg- 56 Query: 630 tagcagcaggctgctgcttctcggtctcctcctcc 664 ||||||||||||||||||||||||||||||||| Sbjct: 55 --gcagcaggctgctgcttctcggtctcctcctcc 23
>gb|AY622364.1| Thinopyrum ponticum clone TW-150 EST-SRR marker sequence Length = 174 Score = 264 bits (133), Expect = 3e-67 Identities = 150/155 (96%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 115 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 114 agggcgcgccgtccatgctcaccttgacaaagttggagccgttgg---caccagcagcgg 58 Query: 630 tagcagcaggctgctgcttctcggtctcctcctcc 664 | ||||||||||||||||||||||||||||||||| Sbjct: 57 tcgcagcaggctgctgcttctcggtctcctcctcc 23
>gb|AY622365.1| Triticum aestivum clone WH-150 EST-SRR marker sequence Length = 174 Score = 256 bits (129), Expect = 8e-65 Identities = 149/155 (96%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 115 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 114 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcggcg- 56 Query: 630 tagcagcaggctgctgcttctcggtctcctcctcc 664 |||||||||||||||||||||||||||||||| Sbjct: 55 --ccagcaggctgctgcttctcggtctcctcctcc 23
>gb|AY622361.1| Bromus inermis clone SB-150 EST-SRR marker sequence Length = 171 Score = 238 bits (120), Expect = 2e-59 Identities = 143/151 (94%), Gaps = 6/151 (3%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 112 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 111 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcaccagca------g 58 Query: 630 tagcagcaggctgctgcttctcggtctcctc 660 | ||||||||||||||||||||||||||||| Sbjct: 57 tggcagcaggctgctgcttctcggtctcctc 27
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 232 bits (117), Expect = 1e-57 Identities = 238/275 (86%), Gaps = 5/275 (1%) Strand = Plus / Minus Query: 45 aataaaatcaccaagtagnattctgggacacatggtagggaacatcacataacaccaatc 104 |||||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1309 aataaaatcatcaagtag-atcttgggacacacggtaggggacatcacataacaccaatc 1251 Query: 105 cagctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactct 164 |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 1250 cagctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactct 1191 Query: 165 cccttcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcaca 223 |||||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||| Sbjct: 1190 tccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacaca 1131 Query: 224 ctgcaagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttag 280 ||||||||||||||| ||||||||| ||| || | ||| |||||| ||| || || Sbjct: 1130 ctgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcag 1071 Query: 281 ctcttgttcttgtacttgtccttggcccttggtgc 315 ||||||||||||||||||||||| || |||||||| Sbjct: 1070 ctcttgttcttgtacttgtcctttgctcttggtgc 1036 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 476 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 535 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 676 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 617 Query: 536 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 616 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 558 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 315 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 374 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 952 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 893 Query: 375 tc 376 || Sbjct: 892 tc 891 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 760 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 702
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 232 bits (117), Expect = 1e-57 Identities = 238/275 (86%), Gaps = 5/275 (1%) Strand = Plus / Plus Query: 45 aataaaatcaccaagtagnattctgggacacatggtagggaacatcacataacaccaatc 104 |||||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||||| Sbjct: 30188319 aataaaatcatcaagtag-atcttgggacacacggtaggggacatcacataacaccaatc 30188377 Query: 105 cagctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactct 164 |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 30188378 cagctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactct 30188437 Query: 165 cccttcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcaca 223 |||||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||| Sbjct: 30188438 tccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacaca 30188497 Query: 224 ctgcaagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttag 280 ||||||||||||||| ||||||||| ||| || | ||| |||||| ||| || || Sbjct: 30188498 ctgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcag 30188557 Query: 281 ctcttgttcttgtacttgtccttggcccttggtgc 315 ||||||||||||||||||||||| || |||||||| Sbjct: 30188558 ctcttgttcttgtacttgtcctttgctcttggtgc 30188592 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 479 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 538 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 30189068 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 30189127 Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 30189128 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 30189183 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 315 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 374 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 30188676 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 30188735 Query: 375 tc 376 || Sbjct: 30188736 tc 30188737 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 30188868 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 30188926 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 24085715 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 24085765 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 557 accttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 32942873 accttgcggaggtatggcgccccgtccatgctcacctt 32942910 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||||||||||||||||||||| Sbjct: 24086291 caggtacggcgcgccgtccatgctcacctt 24086320 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||| ||||||||||||||||| Sbjct: 24100650 caggtacggcgccccgtccatgctcacctt 24100621
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 232 bits (117), Expect = 1e-57 Identities = 238/275 (86%), Gaps = 5/275 (1%) Strand = Plus / Minus Query: 45 aataaaatcaccaagtagnattctgggacacatggtagggaacatcacataacaccaatc 104 |||||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||||| Sbjct: 35576 aataaaatcatcaagtag-atcttgggacacacggtaggggacatcacataacaccaatc 35518 Query: 105 cagctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactct 164 |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 35517 cagctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactct 35458 Query: 165 cccttcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcaca 223 |||||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||| Sbjct: 35457 tccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacaca 35398 Query: 224 ctgcaagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttag 280 ||||||||||||||| ||||||||| ||| || | ||| |||||| ||| || || Sbjct: 35397 ctgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcag 35338 Query: 281 ctcttgttcttgtacttgtccttggcccttggtgc 315 ||||||||||||||||||||||| || |||||||| Sbjct: 35337 ctcttgttcttgtacttgtcctttgctcttggtgc 35303 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 479 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 538 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 34827 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 34768 Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 34767 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 34712 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 315 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 374 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 35219 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 35160 Query: 375 tc 376 || Sbjct: 35159 tc 35158 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 35027 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 34969
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 232 bits (117), Expect = 1e-57 Identities = 238/275 (86%), Gaps = 5/275 (1%) Strand = Plus / Plus Query: 45 aataaaatcaccaagtagnattctgggacacatggtagggaacatcacataacaccaatc 104 |||||||||| ||||||| || ||||||||| ||||||| ||||||||||||||||||| Sbjct: 30279741 aataaaatcatcaagtag-atcttgggacacacggtaggggacatcacataacaccaatc 30279799 Query: 105 cagctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactct 164 |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 30279800 cagctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactct 30279859 Query: 165 cccttcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcaca 223 |||||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||| Sbjct: 30279860 tccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacaca 30279919 Query: 224 ctgcaagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttag 280 ||||||||||||||| ||||||||| ||| || | ||| |||||| ||| || || Sbjct: 30279920 ctgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcag 30279979 Query: 281 ctcttgttcttgtacttgtccttggcccttggtgc 315 ||||||||||||||||||||||| || |||||||| Sbjct: 30279980 ctcttgttcttgtacttgtcctttgctcttggtgc 30280014 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 479 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 538 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 30280490 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 30280549 Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 30280550 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 30280605 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 315 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 374 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 30280098 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 30280157 Query: 375 tc 376 || Sbjct: 30280158 tc 30280159 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 30280290 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 30280348 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 24003184 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 24003234 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 557 accttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 33033383 accttgcggaggtatggcgccccgtccatgctcacctt 33033420 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||||||||||||||||||||| Sbjct: 24003760 caggtacggcgcgccgtccatgctcacctt 24003789 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||| ||||||||||||||||| Sbjct: 24016937 caggtacggcgccccgtccatgctcacctt 24016908
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 220 bits (111), Expect = 5e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 279 agctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaaccct 338 ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 809 agctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaaccct 750 Query: 339 tcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaa 398 ||||||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||| Sbjct: 749 tcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaacaa 690 Query: 399 gcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 |||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 689 gcatccagtcaccatccttgtcttcataagttgtaacagcatc 647 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 476 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 535 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 621 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 562 Query: 536 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 561 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 503
>gb|AY622354.1| Lolium temulentum clone LT-150 EST-SRR marker sequence Length = 176 Score = 204 bits (103), Expect = 3e-49 Identities = 143/155 (92%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 117 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 ||||||||||||||||||||||||| |||||| ||||||||| | ||||||| ||| | Sbjct: 116 agggcgcgccgtccatgctcaccttcacaaaggcagagccgttgccaccagcagtagcag 57 Query: 630 tagcagcaggctgctgcttctcggtctcctcctcc 664 ||||||| ||||||||||||||||||||||||| Sbjct: 56 cagcagca-actgctgcttctcggtctcctcctcc 23
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 202 bits (102), Expect = 1e-48 Identities = 216/252 (85%), Gaps = 4/252 (1%) Strand = Plus / Minus Query: 68 tgggacacatggtagggaacatcacataacaccaatccagctacacacagatagattatt 127 ||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 4479 tgggacacacggtaggggacatcacataacaccaatccagctacacacaaatggattatt 4420 Query: 128 gcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatccagctaata 187 |||||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct: 4419 gcttctggtccataaacaaattaaacatgacaactcttccttcctttaatccagctaaac 4360 Query: 188 attgaaaacattatatatctaa-gaaaccacagcacactgcaagaacaccatccttatgg 246 | ||||| |||||| ||||| ||||||| | ||||||||||||||||||| |||||| Sbjct: 4359 aagtaaaaccttatatttctaaggaaaccataacacactgcaagaacaccatttttatgg 4300 Query: 247 catcatagtcttcctct---tactgccccatgtttagctcttgttcttgtacttgtcctt 303 || ||| || | ||| |||||| ||| || ||||||||||||||||||||||||| Sbjct: 4299 caccatgctcagcatcttaatactgcaacattttcagctcttgttcttgtacttgtcctt 4240 Query: 304 ggcccttggtgc 315 || |||||||| Sbjct: 4239 tgctcttggtgc 4228 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 479 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 538 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 3752 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 3693 Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 3692 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 3637 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 315 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 374 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 4144 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 4085 Query: 375 tc 376 || Sbjct: 4084 tc 4083 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 441 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 3952 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 3894
>gb|AY622356.1| Dactylis glomerata clone OG-150 EST-SRR marker sequence Length = 174 Score = 200 bits (101), Expect = 4e-48 Identities = 139/151 (92%), Gaps = 3/151 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtatgtgttgtacatcttgagatccaccttgcgcaggt 115 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 ||||||||||||||||||||||||| |||||| |||||||||| |||| ||||| | Sbjct: 114 agggcgcgccgtccatgctcaccttcacaaaggcagagccgttgg---cagccgcagcag 58 Query: 630 tagcagcaggctgctgcttctcggtctcctc 660 |||||||||||||||||||||||| ||||| Sbjct: 57 cagcagcaggctgctgcttctcggtttcctc 27
>gb|AY622357.1| Lolium perenne clone PR-150 EST-SRR marker sequence Length = 180 Score = 190 bits (96), Expect = 4e-45 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 121 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagc---agcag 626 ||||||||||||||||||||||||| |||||| ||||||||| | ||||| ||||| Sbjct: 120 agggcgcgccgtccatgctcaccttcacaaaggcagagccgttgccaccagcagtagcag 61 Query: 627 cggtagcagcaggctgctgcttctcggtctcctc 660 | | |||| ||||||||||||||||||| ||||| Sbjct: 60 cagcagcaacaggctgctgcttctcggtttcctc 27
>gb|AY622353.1| Lolium multiflorum clone IR-150 EST-SRR marker sequence Length = 180 Score = 190 bits (96), Expect = 4e-45 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 121 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagc---agcag 626 ||||||||||||||||||||||||| |||||| ||||||||| | ||||| ||||| Sbjct: 120 agggcgcgccgtccatgctcaccttcacaaaggcagagccgttgccaccagcagtagcag 61 Query: 627 cggtagcagcaggctgctgcttctcggtctcctc 660 | | |||| ||||||||||||||||||| ||||| Sbjct: 60 cagcagcaacaggctgctgcttctcggtttcctc 27
>gb|AY622355.1| Schedonorus pratensis clone MF-150 EST-SRR marker sequence Length = 180 Score = 182 bits (92), Expect = 1e-42 Identities = 139/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 121 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagc---agcag 626 |||| |||||||||||||||||||| |||||| |||| |||| | ||||| ||||| Sbjct: 120 agggtgcgccgtccatgctcaccttcacaaaggcagagctgttgccaccagcagtagcag 61 Query: 627 cggtagcagcaggctgctgcttctcggtctcctc 660 | | |||||||||||||||||||||||| ||||| Sbjct: 60 cagcagcagcaggctgctgcttctcggtttcctc 27
>gb|AY622358.1| Festuca rubra clone RF-150 EST-SRR marker sequence Length = 177 Score = 180 bits (91), Expect = 4e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| Sbjct: 177 gcagagcaatggagaggtccttgtaggtcttgtacatgttcagatccaccttgcgcaggt 118 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 ||||||||||||||||||||||||| |||||| ||||||||| | ||||||| || | Sbjct: 117 agggcgcgccgtccatgctcaccttcacaaaggcagagccgttgccaccagcagtaggag 58 Query: 630 tagcagcaggctgctgcttctcggtctcctc 660 |||||||||||||||||||| ||| ||||| Sbjct: 57 cagcagcaggctgctgcttcttggtttcctc 27
>gb|AY622362.1| Schedonorus arundinaceus clone TFS-150 EST-SRR marker sequence Length = 186 Score = 161 bits (81), Expect = 4e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 186 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 127 Query: 570 agggcgcgccgtccatgctcaccttgacaaagttggagccgttggcgccagcagcagcgg 629 |||| || ||||||||||||||||| |||||| ||||||||| | ||||||| ||| | Sbjct: 126 agggtgcaccgtccatgctcaccttcacaaaggcagagccgttgccaccagcagtagcag 67 Query: 630 tagcagcag 638 |||||||| Sbjct: 66 cagcagcag 58 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 618 cagcagcagcggtagcagcaggctgctgcttctcggtctcctc 660 |||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 69 cagcagcagcagcagcagcaggctgctgcttctcggtttcctc 27
>dbj|AK102769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G01, full insert sequence Length = 3241 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 479 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 538 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 2645 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 2704 Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 2705 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 2760
>gb|AY622359.1| Oryza sativa clone RI-150 EST-SRR marker sequence Length = 180 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 510 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 569 |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtagctgttgtacatcttcaggtccaccttgcgcaggt 121 Query: 570 agggcgcgccgtccatgctcacctt 594 |||| |||||||||||||| ||||| Sbjct: 120 agggtgcgccgtccatgctgacctt 96
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 127 bits (64), Expect = 5e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 308 cttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagca 367 |||||||| || || ||||| || || || ||||| ||||| ||||||||||||||| || Sbjct: 752 cttggtgctagtccaatggcctcagatcctttcattatccttaagcgtttgcatgaatca 693 Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaa 427 |||||||||||||| || || || ||||||||||||||||| |||||||||||||||||| Sbjct: 692 acaaacatctcccaaggtacatcaccaacaagcatccagtctccatccttgtcttcgtaa 633 Query: 428 gtag 431 |||| Sbjct: 632 gtag 629
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 338 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 397 ||||| ||||| ||||||||||||||| |||||||||||||||| || || || |||||| Sbjct: 680 ttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaaca 621 Query: 398 agcatccagtcgccatccttgtcttcgtaagtag 431 ||||||||||| ||||| |||||||||||||||| Sbjct: 620 agcatccagtctccatctttgtcttcgtaagtag 587
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 338 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 397 ||||||||||||||||| ||||||||| |||||||||| ||||||| || ||||| ||| Sbjct: 821 ttcatgatcctcaagcgcttgcatgaatcaacaaacattccccatggaacatctcctaca 762 Query: 398 agcatccagtcgccatccttgtcttcgtaagt 429 |||||||| || |||||||||||||| ||||| Sbjct: 761 agcatccaatctccatccttgtcttcataagt 730
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 870 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 811 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 810 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 752
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 683 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 624 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 623 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 565
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 303 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 362 ||||||| |||||||| || ||||| || | || ||||| || | || ||| ||||||| Sbjct: 811 tggccctgggtgcaagtccaatggcctcagttcctttcattatgcgcaggcgcttgcatg 752 Query: 363 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtctt 422 | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 751 atccaacaaacatctcccatgggacgtcaccaacaagcatccagtcaccatccttatctt 692 Query: 423 cgtaagt 429 | ||||| Sbjct: 691 cataagt 685 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 533 taggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacc 592 ||||| || |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 551 taggtcttatacatcttcagatcaaccttgcgaaggtacggtgcgccgtccatgctcacc 492 Query: 593 ttgacaaa 600 || ||||| Sbjct: 491 ttcacaaa 484
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 866 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 807 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 806 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 748
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 223 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 164 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 163 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 105
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 683 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 624 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 623 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 565
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 825 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 766 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 765 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 707
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 854 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 795 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 794 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 736
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 870 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 811 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 810 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 752
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 849 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 790 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 789 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 731
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 ||||| |||||||| || || ||||| || || ||||| ||||| | ||| |||||||| Sbjct: 1058 gccctcggtgcaaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgat 999 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 ||||||||||||||||||||||||| || || |||||||||||||| |||||||| ||| Sbjct: 998 tcaacaaacatctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 939 Query: 425 ta 426 || Sbjct: 938 ta 937 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 797 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 742
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 25346694 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 25346749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 25345350 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 25345400 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||| |||||| || | ||| | |||||| || || ||||||||||||||||| Sbjct: 25359739 ttgtacaccttgaggtctatcttcctcaggtatggagctccgtccatgctcacctt 25359684
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 25274870 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 25274925 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 25273526 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 25273576 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||| |||||| || | ||| | |||||| || || ||||||||||||||||| Sbjct: 25287915 ttgtacaccttgaggtctatcttcctcaggtatggagctccgtccatgctcacctt 25287860
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 13504 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 13559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 12160 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 12210 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||| |||||| || | ||| | |||||| || || ||||||||||||||||| Sbjct: 26549 ttgtacaccttgaggtctatcttcctcaggtatggagctccgtccatgctcacctt 26494
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1257 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1198 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 | | |||||||||||| ||||| || || |||||||||||||| |||||||| |||||| Sbjct: 1197 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcg 1138 Query: 425 taagt 429 ||||| Sbjct: 1137 taagt 1133
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1256 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1197 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 | | |||||||||||| ||||| || || |||||||||||||| |||||||| |||||| Sbjct: 1196 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcg 1137 Query: 425 taagt 429 ||||| Sbjct: 1136 taagt 1132
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1257 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1198 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 | | |||||||||||| ||||| || || |||||||||||||| |||||||| |||||| Sbjct: 1197 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcg 1138 Query: 425 taagt 429 ||||| Sbjct: 1137 taagt 1133
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 356 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 415 ||||||||| ||||||||||||||||||| || || || ||||||||||| ||||||||| Sbjct: 959 ttgcatgaatcaacaaacatctcccatggaacatcacccacaagcatccaatcgccatcc 900 Query: 416 ttgtcttc 423 |||||||| Sbjct: 899 ttgtcttc 892
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaa 427 ||||||||||||||||| || |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 27206 acaaacatctcccatggaacatctccaactagcatccagtcaccatccttgtcttcataa 27147 Query: 428 gtag 431 |||| Sbjct: 27146 gtag 27143
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 338 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 397 ||||||||| |||| | ||||| ||| ||| ||||||||||| ||||| ||||||||| Sbjct: 101 ttcatgatcttcaacctcttgcaagaatcaatgaacatctcccaggggacatctccaaca 42 Query: 398 agcatccagtcgccatccttgtc 420 ||||||||||||||||||||||| Sbjct: 41 agcatccagtcgccatccttgtc 19
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 540 tgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 706 tgtacatcttgaggtccactttgcgcaggtagggcgcgccgtccaagctcacctt 652 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 285 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 344 |||||||| | || ||| ||||||||||||| || || |||||||| || || ||||||| Sbjct: 988 tgttcttgcatttctccatggcccttggtgccaggccaatggcttctgatcctttcatga 929 Query: 345 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 404 ||| | ||| |||||||| | || ||||||||||| || || || || || ||||||| Sbjct: 928 tccgaaggcgcttgcatgattcgacgaacatctcccacggcacatcgccgacgagcatcc 869 Query: 405 agtcgccatccttgtcttcgta 426 |||| || |||||||| ||||| Sbjct: 868 agtccccgtccttgtcctcgta 847
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||||||||| || |||||||| || || |||||||| | | ||||||||| || Sbjct: 685 gcccttggtgcaaggccaatggcttcagaccctttcatgattcggaggcgtttgcacgac 626 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 | || ||||||||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 625 tcgacgaacatctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 566 Query: 425 ta 426 || Sbjct: 565 ta 564 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||||||||||||||||||||| Sbjct: 410 caggtacggcgcgccgtccatgctcacctt 381
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 356 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 415 |||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 308 ttgcatgattcaacaaacatctcccatgggacatcaccgacaagcatccagtcaccatcc 249 Query: 416 ttgtc 420 ||||| Sbjct: 248 ttgtc 244
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 369 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 428 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 787 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 728 Query: 429 t 429 | Sbjct: 727 t 727 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 524 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 583 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 638 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 579 Query: 584 atgctcaccttgac 597 ||||| |||||||| Sbjct: 578 atgctgaccttgac 565
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 369 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 428 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 778 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 719 Query: 429 t 429 | Sbjct: 718 t 718 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 524 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 583 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 629 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 570 Query: 584 atgctcaccttgac 597 ||||| |||||||| Sbjct: 569 atgctgaccttgac 556
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 369 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 428 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 758 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 699 Query: 429 t 429 | Sbjct: 698 t 698 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 524 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 583 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 609 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 550 Query: 584 atgctcaccttgac 597 ||||| |||||||| Sbjct: 549 atgctgaccttgac 536
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 369 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 428 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 844 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 785 Query: 429 t 429 | Sbjct: 784 t 784
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 356 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 415 |||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 1158 ttgcatgattcaacaaacatctcccatgggacatcaccgacaagcatccagtcaccatcc 1099 Query: 416 ttgtc 420 ||||| Sbjct: 1098 ttgtc 1094
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 274 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtctaagctcacctt 219 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 285 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 344 |||||||| | || ||| ||||||| || || || || |||||||| || || ||||||| Sbjct: 561 tgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgatcctttcatga 502 Query: 345 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 404 ||| | ||| |||||||| | || ||||||||||| || ||||| || || ||||||| Sbjct: 501 tccgaaggcgcttgcatgattcgacgaacatctcccacggcacgtcgccgacgagcatcc 442 Query: 405 agtcgccatccttgtcttcgta 426 ||||||| |||||||| ||||| Sbjct: 441 agtcgccctccttgtcctcgta 420
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| ||| ||||||||||||||| | | ||| ||| |||||||||||| |||||| Sbjct: 830 gcttctgaagccttcatgatcctcattctctggcaggaatcaacaaacatctgccatgga 771 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 770 acatcgcctacaagcatccagtctccatccttgtcttcataagt 727
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | |||||| | ||||| ||||||||| | |||||||||||||| || Sbjct: 13189632 gctgaacatcttctccagagccaaagagagctccttgtagttcttgtacatcttgaggtc 13189573 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 |||||| | ||||| || || || |||||||||||||||||| Sbjct: 13189572 caccttcctgaggtaaggagcaccatccatgctcaccttgaca 13189530 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 597 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 23118823 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 23118780 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 23119015 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 23118972
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | |||||| | ||||| ||||||||| | |||||||||||||| || Sbjct: 106820 gctgaacatcttctccagagccaaagagagctccttgtagttcttgtacatcttgaggtc 106761 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 |||||| | ||||| || || || |||||||||||||||||| Sbjct: 106760 caccttcctgaggtaaggagcaccatccatgctcaccttgaca 106718
>dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | |||||| | ||||| ||||||||| | |||||||||||||| || Sbjct: 710 gctgaacatcttctccagagccaaagagagctccttgtagttcttgtacatcttgaggtc 651 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 |||||| | ||||| || || || |||||||||||||||||| Sbjct: 650 caccttcctgaggtaaggagcaccatccatgctcaccttgaca 608
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 356 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 415 ||||||||||||| |||||||||||| || || || ||||||||||||||||| |||||| Sbjct: 839 ttgcatgaagcaataaacatctcccaaggaacatccccaacaagcatccagtctccatcc 780 Query: 416 tt 417 || Sbjct: 779 tt 778
>gb|AY847062.1| Avena sativa Aux/IAA1 mRNA, partial cds Length = 552 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 521 gagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccg 580 ||||||||||||||| | ||||||||||| ||||||||||| | ||||| ||||| || Sbjct: 402 gagaggtccttgtagttcttgtacatcttaagatccaccttcctgaggtaaggcgcacca 343 Query: 581 tccatgctcaccttgaca 598 |||||||| ||||||||| Sbjct: 342 tccatgctaaccttgaca 325
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || || || ||||| || ||||| |||||||||||||| | ||||| | Sbjct: 1222 gcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttgcaagtg 1163 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 ||| |||||||||||| || || || || |||||||||||||| |||||||| |||||| Sbjct: 1162 tcaataaacatctcccaaggtacatcaccgacaagcatccagtccccatccttatcttcg 1103 Query: 425 taagt 429 ||||| Sbjct: 1102 taagt 1098
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 73.8 bits (37), Expect = 6e-10 Identities = 100/121 (82%) Strand = Plus / Minus Query: 303 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 362 |||||||||| || | ||| || ||||| || ||||||| ||||||| | || ||| | Sbjct: 733 tggcccttggagctaaaccaatagcttctcaagccttcattatcctcattctttggcagg 674 Query: 363 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtctt 422 || |||||||||| ||||| ||||| || || |||||||||||||| ||||||||||||| Sbjct: 673 aatcaacaaacatatcccaggggacatcgcctacaagcatccagtctccatccttgtctt 614 Query: 423 c 423 | Sbjct: 613 c 613 Score = 40.1 bits (20), Expect = 9.1 Identities = 59/72 (81%) Strand = Plus / Minus Query: 520 ggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgcc 579 ||||||||| | ||||||| | ||||| ||||| |||||||| | || ||||| || || Sbjct: 495 ggagaggtcatggtaggtgctatacattttgaggtccacctttctgagatagggggctcc 436 Query: 580 gtccatgctcac 591 ||||||||||| Sbjct: 435 atccatgctcac 424
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || || || ||||| || ||||| |||||||||||||| | ||||| | Sbjct: 1159 gcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttgcaagtg 1100 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 ||| |||||||||||| || || || ||||||||||||||||| |||||||| ||||| Sbjct: 1099 tcaataaacatctcccaaggtacatcaccaacaagcatccagtccccatccttatcttca 1040 Query: 425 taagt 429 ||||| Sbjct: 1039 taagt 1035
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 355 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 |||||| |||| |||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 595 tttgcaagaagtcacaaacatgtcccatggtacatctccaactagcatccagtcaccatc 536 Query: 415 cttgtcttc 423 ||||||||| Sbjct: 535 cttgtcttc 527
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 353 cgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgcca 412 |||||||| || |||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 748 cgtttgcaagattcaacaaacatctcccacggaacatctccaacaagcatccaatcacca 689 Query: 413 tccttgtcttcgtaagt 429 || |||||||| ||||| Sbjct: 688 tctttgtcttcataagt 672
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 752 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 697
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 736 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 681
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 833 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 778
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 784 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 729
>gb|BT017977.1| Zea mays clone EL01N0525A01.c mRNA sequence Length = 885 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 520 ggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgcc 579 ||||||||||| |||| || ||||||||||| |||||||| | |||||||||||||| Sbjct: 367 ggagaggtcctcgtagctggagtacatcttgatgtccaccttcctgaggtagggcgcgcc 308 Query: 580 gtccatgctcacctt 594 |||||||||||||| Sbjct: 307 atccatgctcacctt 293
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 337 cttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaac 396 |||||||||||||| | |||||||| || |||||||||||| ||||||||||| || Sbjct: 180 cttcatgatcctcagcctcttgcatgactcagtaaacatctcccaagggacgtctcccac 121 Query: 397 aagcatccagtcgccatccttgtcttc 423 ||||||||||| ||||| |||||||| Sbjct: 120 tagcatccagtctccatctttgtcttc 94
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 285 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 344 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 775 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 716 Query: 345 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 404 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 715 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 656 Query: 405 agtcgccatccttgtcttcgta 426 |||| ||||| ||||| ||||| Sbjct: 655 agtcaccatctttgtcctcgta 634 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 521 gagaggtccttgtaggtgttgtacatcttgagatccacctt 561 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 509 gagagatccttgtagctggtgtacatcttgaggtcaacctt 469
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 285 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 344 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 679 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 620 Query: 345 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 404 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 619 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 560 Query: 405 agtcgccatccttgtcttcgta 426 |||| ||||| ||||| ||||| Sbjct: 559 agtcaccatctttgtcctcgta 538 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 521 gagaggtccttgtaggtgttgtacatcttgagatccacctt 561 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 413 gagagatccttgtagctggtgtacatcttgaggtcaacctt 373
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 130362 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagt 130309 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 524 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 583 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 129481 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 129422 Query: 584 atgctcaccttgac 597 ||||| |||||||| Sbjct: 129421 atgctgaccttgac 129408
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 37551 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagt 37498 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 524 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 583 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 36670 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 36611 Query: 584 atgctcaccttgac 597 ||||| |||||||| Sbjct: 36610 atgctgaccttgac 36597
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || ||||| ||||| || ||||| ||||||||||||| | ||||| | | Sbjct: 1288 gcccttggggctagaccaatggcatctgaacctttcatgatcctcagcctcttgcaggta 1229 Query: 365 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 424 ||| |||||||||||| ||||| || || || ||||||||||| |||||||| || ||| Sbjct: 1228 tcaataaacatctcccaggggacatcaccgactagcatccagtccccatccttatcctcg 1169 Query: 425 ta 426 || Sbjct: 1168 ta 1167
>gb|AY289603.1| Pinus taeda auxin-induced protein 4 (IAA4) mRNA, complete cds Length = 1231 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| ||| |||||||||||| || | || ||| ||| |||||||||||| ||||||| Sbjct: 685 gcttctgaagccttcatgatccgcactctttggcaggaatcaacaaacatctgccatggg 626 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 431 || || || ||||||||||| || ||||| || ||||| ||||||| Sbjct: 625 acatcgcctacaagcatccaatctccatctttatcttcataagtag 580 Score = 40.1 bits (20), Expect = 9.1 Identities = 59/72 (81%) Strand = Plus / Minus Query: 520 ggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgcc 579 ||||||||| | |||||| ||||||| ||||| |||||||| | || ||||| || || Sbjct: 470 ggagaggtcatgataggtgctgtacattttgaggtccacctttctgagatagggagctcc 411 Query: 580 gtccatgctcac 591 ||||||||||| Sbjct: 410 atccatgctcac 399
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 7852776 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagt 7852723 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 4624577 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 4624620 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 524 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 583 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 7851895 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 7851836 Query: 584 atgctcaccttgac 597 ||||| |||||||| Sbjct: 7851835 atgctgaccttgac 7851822 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 554 tccaccttgcgcaggtagggcgcgccgtc 582 ||||||||||||||||| ||||||||||| Sbjct: 4624858 tccaccttgcgcaggtacggcgcgccgtc 4624886 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 27627750 ccaacaagcatccagtcagcatccttgtcttc 27627781
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 285 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 344 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 768 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 709 Query: 345 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 404 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 708 tgcccaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 649 Query: 405 agtcgccatccttgtcttcgta 426 |||| ||||| ||||| ||||| Sbjct: 648 agtcaccatctttgtcctcgta 627 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 521 gagaggtccttgtaggtgttgtacatcttgagatccacctt 561 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 502 gagagatccttgtagctggtgtacatcttgaggtcaacctt 462
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 285 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 344 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 487 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 428 Query: 345 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 404 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 427 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 368 Query: 405 agtcgccatccttgtcttcgta 426 |||| ||||| ||||| ||||| Sbjct: 367 agtcaccatctttgtcctcgta 346 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 521 gagaggtccttgtaggtgttgtacatcttgagatccacctt 561 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 221 gagagatccttgtagctggtgtacatcttgaggtcaacctt 181
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 367 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||||||| || || || |||||||||||||| || ||||| |||||||| || Sbjct: 724 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 665 Query: 427 agtag 431 ||||| Sbjct: 664 agtag 660
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 737 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 678 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 677 acatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtcctcgta 580
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtcctcgta 580
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 735 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 676 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 675 acatcgccaacgagcatccagtcaccatctttgtcctcgta 635
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtcctcgta 580
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 678 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 619 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 618 acatcgccaacgagcatccagtcaccatctttgtcctcgta 578
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 367 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||||||| || || || |||||||||||||| || ||||| |||||||| || Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 433 Query: 427 agtag 431 ||||| Sbjct: 432 agtag 428
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 737 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 678 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 677 acatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 702 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 643 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 642 acatcgccaacgagcatccagtcaccatctttgtcctcgta 602
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 367 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||||||| || || || |||||||||||||| || ||||| |||||||| || Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 433 Query: 427 agtag 431 ||||| Sbjct: 432 agtag 428
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 431 |||||| || |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 611 ccatggaacatctccaaccagcatccagtcaccatccttgtcttcataagtag 559
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1144
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1144
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 431 |||||| || || |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 95 ctcccagggaacatctccaactagcatccagtctccatccttgtcttcataagtag 40
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1163 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1116
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 918 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 871
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1195 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1148
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||| ||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 649 aacatcttccaggggacgtcgccgacgagcatccagtcgccatccttgtcctcgta 594 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtc 582 |||||||| |||||||||||||||||||| Sbjct: 454 tccaccttccgcaggtagggcgcgccgtc 426
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1151 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1104
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 450 tccaccttgcgcaggtacggcgcgccgtcca 420
>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds Length = 291 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 355 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 ||||||||| | ||||||||||||||||| || || |||||||||||||| || ||||| Sbjct: 216 tttgcatgactccacaaacatctcccatggaacatcaccaacaagcatccaatctccatc 157 Query: 415 cttgtcttcgtaagt 429 || ||||| ||||| Sbjct: 156 tttatcttcataagt 142
>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds Length = 990 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 355 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 ||||||||| | ||||||||||||||||| || || |||||||||||||| || ||||| Sbjct: 507 tttgcatgactccacaaacatctcccatggaacatcaccaacaagcatccaatctccatc 448 Query: 415 cttgtcttcgtaagt 429 || ||||| ||||| Sbjct: 447 tttatcttcataagt 433
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 7251225 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 7251175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 27771425 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 27771366 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 27771365 gaccttcctgaggtagggggctccatccatgctcaccttgaca 27771323 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 4074893 tccaccttgcgcaggtacggcgcgccgtcca 4074923 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatc 403 |||||||||| ||||||||||||||||| Sbjct: 40692256 ctcccatgggtcgtctccaacaagcatc 40692229 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 10312454 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 10312407 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 4074630 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 4074673 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||| ||||| Sbjct: 27772077 ccaacaagcatccagtcagcatccttatcttc 27772046
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 145873 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 145823
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 52655 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 52605
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 450 tccaccttgcgcaggtacggcgcgccgtcca 420
>emb|X68215.1|PSPIAA45R P.sativum mRNA for pIAA4/5.1 Length = 1022 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 355 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 |||||| |||| |||||||| |||||||| || |||||||| | |||||| || ||||| Sbjct: 611 tttgcaggaagtcacaaacatgtcccatggaacatctccaactaacatccaatcaccatc 552 Query: 415 cttgtcttcgtaagt 429 ||||||||| ||||| Sbjct: 551 cttgtcttcataagt 537
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 650 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 592 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 452 tccaccttgcgcaggtacggcgcgccgtcca 422
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| | ||| ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 695 acaaacattttccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 637 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtc 582 ||||||||||||||||| ||||||||||| Sbjct: 497 tccaccttgcgcaggtacggcgcgccgtc 469
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 640 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 582 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 442 tccaccttgcgcaggtacggcgcgccgtcca 412
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| | ||| ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 692 acaaacattttccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 634 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtc 582 ||||||||||||||||| ||||||||||| Sbjct: 494 tccaccttgcgcaggtacggcgcgccgtc 466
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 450 tccaccttgcgcaggtacggcgcgccgtcca 420
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||||||||||| || || |||||||| ||||||||||||||||| ||||| Sbjct: 475 aaacatctcccaaggaacatctccaaccagcatccagtcgccatctttgtc 425
>gb|BT014412.1| Lycopersicon esculentum clone 133719R, mRNA sequence Length = 977 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 366 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgt 425 |||||||||| | |||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct: 605 caacaaacattttccatggaacatctcctacaagcatccagtctccatctttatcttcat 546 Query: 426 aagtag 431 |||||| Sbjct: 545 aagtag 540
>gb|AY289602.1| Pinus taeda auxin-induced protein 3 (IAA3) mRNA, complete cds Length = 1236 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 366 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgt 425 |||||||||||| ||||||||| || || | ||||||||| || |||||||| ||||| | Sbjct: 780 caacaaacatctgccatgggacatcgcctataagcatccaatctccatccttatcttcat 721 Query: 426 aagtag 431 |||||| Sbjct: 720 aagtag 715
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||||||||| | || ||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 455 ttgtacatcttcaagtcaaccttccgcaggtacggcgccccgtccatgctcaccttcaca 396 Query: 599 aa 600 || Sbjct: 395 aa 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 366 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||| |||| || || || || ||||||||||| || |||||||||||||| Sbjct: 658 caacaaacatcccccaaggaacatcaccgacaagcatccaatctccatccttgtcttc 601
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||||| ||||| || ||||||||||| || ||||||||||| |||||||| Sbjct: 642 ctcccatggtacgtcgccgacaagcatccaatctccatccttgtcctcgtaagt 589
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 540 aacatttcccatggcacatctccaacaagcatccagtcaccatctttgtc 491
>gb|AY062215.1| Antirrhinum majus auxin-induced AUX/IAA1 mRNA, partial cds Length = 517 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 ||||| |||||||| || |||||||| | |||||| || |||||||||||||| |||||| Sbjct: 464 aacatatcccatggcacatctccaaccaacatccaatctccatccttgtcttcataagta 405 Query: 431 g 431 | Sbjct: 404 g 404
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 326 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 385 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 981 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 922 Query: 386 acgtctccaacaagcatccagtcgccatccttgtcttcgta 426 || || ||||| |||||||||| ||||| ||||| ||||| Sbjct: 921 acatcgccaacgagcatccagttaccatctttgtcctcgta 881
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 374 atctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 |||||||||||||| || |||||||||||||| || ||||| || ||||| |||||| Sbjct: 1092 atctcccatgggacatcgccaacaagcatccaatcaccatctttatcttcataagta 1036
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||| |||||||| || |||||||| |||||||| || |||||||||||||| Sbjct: 611 aacatatcccatggtacatctccaactagcatccaatcaccatccttgtcttc 559
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 356 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 415 |||||||| ||| |||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct: 393 ttgcatgactcaataaacatctcccaagggacatctccaaccagcatccaatcaccatct 334 Query: 416 ttgtc 420 ||||| Sbjct: 333 ttgtc 329
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 135044 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 135087 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 554 tccaccttgcgcaggtagggcgcgccgtc 582 ||||||||||||||||| ||||||||||| Sbjct: 135325 tccaccttgcgcaggtacggcgcgccgtc 135353
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 67621 ctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 67668 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 cgtttgcatgaagcaacaaacatc 376 |||||||||||| ||||||||||| Sbjct: 67503 cgtttgcatgaatcaacaaacatc 67526
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 597 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 69471 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 69428 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 69663 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 69620
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 356 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 415 |||||||| |||||||||| ||||||||||| || || || ||||||||||| || ||| Sbjct: 683 ttgcatgattcaacaaacatgtcccatgggacatcaccgacgagcatccagtcaccgtcc 624 Query: 416 ttgtcttc 423 || ||||| Sbjct: 623 ttatcttc 616
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 623 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 568 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 597 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 419 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 376
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 597 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 418 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 375 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 610 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 567
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 23077 ctcccatgggacatctcccacgagcatccagtcaccatccttatcttc 23030
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 687 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 856 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 798
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 817 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 759
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 822 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 764
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 561 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 502 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 501 gaccttcctgaggtagggggctccatccatgctcaccttgaca 459 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||| ||||| Sbjct: 701 ccaacaagcatccagtcagcatccttatcttc 670
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 5741 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 5691 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||||||||||||||||||||| Sbjct: 5165 caggtacggcgcgccgtccatgctcacctt 5136
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 136841 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 136791 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||||||||||||||||||||| Sbjct: 136265 caggtacggcgcgccgtccatgctcacctt 136236 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||| ||||||||||||||||| Sbjct: 123182 caggtacggcgccccgtccatgctcacctt 123211
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 723 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 665
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 551 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 492 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 491 gaccttcctgaggtagggggctccatccatgctcaccttgaca 449
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 ||||| |||||||| || ||||||||||||||||| || |||||||| Sbjct: 1159 aacatatcccatggtacatctccaacaagcatccaatcaccatcctt 1113
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 41636 tccaccttgcgcaggtacggcgcgccgtcca 41666 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 41373 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 41416
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 63480 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 63421 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 63420 gaccttcctgaggtagggggctccatccatgctcaccttgaca 63378 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||| ||||| Sbjct: 64132 ccaacaagcatccagtcagcatccttatcttc 64101
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 554 tccaccttgcgcaggtagggcgcgccgtcca 584 ||||||||||||||||| ||||||||||||| Sbjct: 21864 tccaccttgcgcaggtacggcgcgccgtcca 21894 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 383 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 21601 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 21644
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 36825 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgta 36775
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 648 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 589 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 588 gaccttcctgaggtagggggctccatccatgctcaccttgaca 546 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||| ||||| Sbjct: 788 ccaacaagcatccagtcagcatccttatcttc 757
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 817 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 759
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 822 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 764
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 563 gctgaacatcttctcgagagccatggagaggtcctcatagttagaatacatcttgaggtc 504 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 503 gaccttcctgaggtagggggctccatccatgctcaccttgaca 461 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||| ||||| Sbjct: 703 ccaacaagcatccagtcagcatccttatcttc 672
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 856 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 798
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 496 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 555 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 574 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 515 Query: 556 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 514 gaccttcctgaggtagggggctccatccatgctcaccttgaca 472 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||| ||||| Sbjct: 714 ccaacaagcatccagtcagcatccttatcttc 683
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 |||||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 405 acaaacatctcccatgggacatcacccacgagcatccagtcaccatc 359
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||||||||| | ||||| ||||| ||||| || || || |||||||||||||||||| Sbjct: 711 ttgtacatcttcaagtccactttgcgaaggtaaggtgctccatccatgctcaccttgaca 770 Query: 599 aag 601 ||| Sbjct: 771 aag 773 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 431 |||||| || |||||||| |||||||| || ||||||||||| || ||||||| Sbjct: 21980 ccatggaacatctccaaccagcatccaatcaccatccttgtcctcataagtag 21928
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||||| ||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 1364 aaacatttcccaagggacatctccaacaagcatccaatcaccatctttgtc 1314
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || |||||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 596 ccatggaacatctccaaccagcatccagtcaccatctttgtcttcataagt 546
>ref|NM_185060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 557 accttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 371 accttgcggaggtatggcgccccgtccatgctcacctt 334
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 557 accttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 47302 accttgcggaggtatggcgccccgtccatgctcacctt 47265
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||| || || |||||||||||||||||||| |||||||| Sbjct: 111842 ctcccacggaacatctccaacaagcatccagtcaccatcctt 111883
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 417 |||||| || || |||||||||||||||||||| |||||||| Sbjct: 7963 ctcccacggaacatctccaacaagcatccagtcaccatcctt 7922
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 303 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 362 |||||||||| || || || ||||| || || | |||||||||||||| | ||||||| Sbjct: 1259 tggcccttggggctaggccaatggcatcagagctcttcatgatcctcagcctcttgcatg 1200 Query: 363 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtc 408 ||| |||||||||||| || || || ||||||||||||||||| Sbjct: 1199 tttcaataaacatctcccagggaacatcgccaacaagcatccagtc 1154
>emb|X68216.1|PSIAA45D P.sativum PS-IAA4/5 gene Length = 3976 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||||| || |||||||| | |||||| || |||||||||||||| ||||| Sbjct: 3275 ctcccatggaacatctccaactaacatccaatcaccatccttgtcttcataagt 3222
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 557 accttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 436 accttgcggaggtatggcgccccgtccatgctcacctt 399
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 540 tgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 597 |||||||| | || |||||||| | |||||| || ||||||||||||||||| ||||| Sbjct: 590 tgtacatcctcaggtccaccttcctcaggtacggggcgccgtccatgctcactttgac 533
>gb|U18417.1|ATU18417 Arabidopsis thaliana subspecies IAA15 (IAA15) pseudogene Length = 359 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 400 catccagtcgccatccttgtcttcgtaagtagtaacaa 437 |||||| |||||||||||||| |||||||||| ||||| Sbjct: 359 catccaatcgccatccttgtcctcgtaagtagcaacaa 322
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 539 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 598 ||||||| |||||||||||||| || || || || || ||||||||||||||||| ||| Sbjct: 4871 ttgtacagtttgagatccaccttacgtagatatggtgcaccgtccatgctcaccttcaca 4930 Query: 599 aa 600 || Sbjct: 4931 aa 4932 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 agcatccagtcgccatccttgtctt 422 ||||||||||| ||||||||||||| Sbjct: 4691 agcatccagtcaccatccttgtctt 4715
>ref|NM_104161.2| Arabidopsis thaliana IAA6; transcription factor AT1G52830 (IAA6) mRNA, complete cds Length = 829 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 583 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 527
>ref|NM_100305.2| Arabidopsis thaliana SHY2 (SHORT HYPOCOTYL 2); transcription factor AT1G04240 (SHY2) mRNA, complete cds Length = 1042 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 596 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 537 Query: 431 g 431 | Sbjct: 536 g 536
>ref|XM_464766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagca 401 ||||| |||||||||| ||||||| || ||||||||||||| Sbjct: 1075 tgaagaaacaaacatcccccatggcacatctccaacaagca 1035
>gb|AY064007.1| Arabidopsis thaliana putative auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 1003 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 596 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 537 Query: 431 g 431 | Sbjct: 536 g 536
>gb|AF332393.1| Arabidopsis thaliana clone C00011 (f) auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 570 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 500 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 441 Query: 431 g 431 | Sbjct: 440 g 440
>gb|AF336915.1| Arabidopsis thaliana clone C00013 (h) IAA6 (At1g52830) mRNA, complete cds Length = 570 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 498 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 442
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 337 cttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaac 396 |||||||||||||| || ||||||| ||| |||||||| ||| || || || || || Sbjct: 1020 cttcatgatcctcagccgcttgcatgtctcaataaacatctgccagggcacatcacccac 961 Query: 397 aagcatccagtcgccatcctt 417 |||||||||||| |||||||| Sbjct: 960 aagcatccagtcaccatcctt 940
>emb|BX817970.1|CNS0AE4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 570 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 514
>dbj|AK121870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103P10, full insert sequence Length = 1408 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagca 401 ||||| |||||||||| ||||||| || ||||||||||||| Sbjct: 1075 tgaagaaacaaacatcccccatggcacatctccaacaagca 1035
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 |||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 1154 aaacatctcccaggggacatcaccgacaagcatccagtcaccatc 1110
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 tccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 482 tccaccttccggaggtatggcgccccgtccatgctcacctt 442
>gb|U18408.1|ATU18408 Arabidopsis thaliana IAA6 (IAA6) gene, complete cds Length = 764 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 518 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 462
>gb|U18406.1|ATU18406 Arabidopsis thaliana IAA3 (IAA3) gene, complete cds Length = 1031 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 585 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 526 Query: 431 g 431 | Sbjct: 525 g 525
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||||| ||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 57582 ctcccaagggacatctccaaccagcatccagtcaccatctttgtc 57538
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||| ||||| || |||||||||||||| || ||||| || ||||| Sbjct: 63 aacatctcccaagggacatcaccaacaagcatccaatctccatctttatcttc 11
>ref|NM_183562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 558 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 511
>ref|XM_476878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Minus Query: 543 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 535 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 484 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 tggcttcggaacccttcatgatcctcaa 351 ||||||| || ||||||||||||||||| Sbjct: 742 tggcttcagagcccttcatgatcctcaa 715
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 95026 ccaacaagcatccagtcagcatccttgtcttc 95057
>gb|AY289601.1| Pinus taeda auxin-induced protein 2 (IAA2) mRNA, complete cds Length = 1774 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 368 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 986 acaaacatctcccatggaacatcgcctacaagcatccaatctccatctttatcttc 931
>gb|AC158504.10| Medicago truncatula clone mth2-151m4, complete sequence Length = 117136 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||| || || ||||| |||||||| || |||||||||||||| Sbjct: 95752 ctcccatggaacatcaccaactagcatccaatcaccatccttgtcttc 95799
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 543 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 4388104 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 4388155 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 tggcttcggaacccttcatgatcctcaa 351 ||||||| || ||||||||||||||||| Sbjct: 4387785 tggcttcagagcccttcatgatcctcaa 4387812
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatc 403 |||||||||| ||||||||||||||||| Sbjct: 134234 ctcccatgggtcgtctccaacaagcatc 134207
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtcaccatc 696
>gb|AY085353.1| Arabidopsis thaliana clone 147711 mRNA, complete sequence Length = 783 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 580 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 525
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 19174 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 19127
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 543 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 27953 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 28004 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 tggcttcggaacccttcatgatcctcaa 351 ||||||| || ||||||||||||||||| Sbjct: 27634 tggcttcagagcccttcatgatcctcaa 27661
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 814 ccaacaagcatccagtcagcatccttgtcttc 783
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttcgtaagtag 431 |||||||||||||| || ||||| |||||||| ||||||| Sbjct: 5914 ccaacaagcatccaatcaccatctttgtcttcataagtag 5875
>emb|X53435.1|ATAUX211 A.thaliana auxin-inducible gene Aux2-11 Length = 1776 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttcgtaagtag 431 |||||||||||||| || ||||| |||||||| ||||||| Sbjct: 1243 ccaacaagcatccaatcaccatctttgtcttcataagtag 1204
>emb|AJ306828.1|PTR306828 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA5 gene) Length = 1251 Score = 48.1 bits (24), Expect = 0.037 Identities = 51/60 (85%) Strand = Plus / Minus Query: 370 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 ||||||| |||| || || ||||| ||||||||||| || ||||||||||| || ||||| Sbjct: 836 aaacatcccccaaggaacatctccgacaagcatccaatccccatccttgtcctcataagt 777
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 855 ccaacaagcatccagtcagcatccttgtcttc 824
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 808 ccaacaagcatccagtcagcatccttgtcttc 777
>dbj|AK103483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130J12, full insert sequence Length = 1164 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Minus Query: 543 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 594 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 535 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 484 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 tggcttcggaacccttcatgatcctcaa 351 ||||||| || ||||||||||||||||| Sbjct: 742 tggcttcagagcccttcatgatcctcaa 715
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 803 ccaacaagcatccagtcagcatccttgtcttc 772
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 ccaacaagcatccagtcgccatccttgtcttc 423 ||||||||||||||||| ||||||||||||| Sbjct: 816 ccaacaagcatccagtcagcatccttgtcttc 785
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 414 ||||||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 1206 aacatctcccaagggacatcaccaacgagcatccagtcaccatc 1163
>ref|NM_100334.2| Arabidopsis thaliana IAA12 (BODENLOS); transcription factor AT1G04550 (IAA12) transcript variant AT1G04550.2 mRNA, complete cds Length = 1198 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 774 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 724
>ref|NM_179258.1| Arabidopsis thaliana IAA12 (BODENLOS); transcription factor AT1G04550 (IAA12) transcript variant AT1G04550.1 mRNA, complete cds Length = 1352 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 855 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 805
>ref|NM_119006.3| Arabidopsis thaliana IAA11; transcription factor AT4G28640 (IAA11) mRNA, complete cds Length = 1108 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 831 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 772 Query: 421 ttc 423 ||| Sbjct: 771 ttc 769
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 377 tcccatgggacgtctccaacaagcatc 403 ||||||||| ||||||||||||||||| Sbjct: 2264 tcccatgggtcgtctccaacaagcatc 2238
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 371 aacatctcccatgggacgtctccaacaagcatcca 405 ||||||||||| || ||||| |||||||||||||| Sbjct: 53 aacatctcccaaggaacgtcgccaacaagcatcca 19
>gb|BT000261.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 887 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 678 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 619 Query: 421 ttc 423 ||| Sbjct: 618 ttc 616
>gb|AF332398.1| Arabidopsis thaliana auxin-induced protein, IAA12 (At1g04550) mRNA, complete cds Length = 720 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 606 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 556
>gb|AY096535.1| Arabidopsis thaliana auxin-induced protein IAA12 (At1g04550) mRNA, complete cds Length = 751 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 606 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 556
>gb|AY065240.1| Arabidopsis thaliana auxin-induced protein IAA12 (At1g04550) mRNA, complete cds Length = 1187 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 748 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 698
>emb|AJ627255.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA20 transcriptional repressor (putative IAA20 gene) Length = 561 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 tcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 514 tcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 468
>gb|AY099670.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 1091 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 817 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 758 Query: 421 ttc 423 ||| Sbjct: 757 ttc 755
>gb|AF332397.1| Arabidopsis thaliana clone C00018 (e) early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 678 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 619 Query: 421 ttc 423 ||| Sbjct: 618 ttc 616
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 35092661 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 35092711
>gb|AY088042.1| Arabidopsis thaliana clone 40608 mRNA, complete sequence Length = 1194 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 774 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 724
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 153002 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 153052
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 376 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 426 |||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 65824 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 65874
>dbj|AK118377.1| Arabidopsis thaliana At4g28640 mRNA for putative early auxin-inducible protein 11 (IAA11), complete cds, clone: RAFL19-64-E04 Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 817 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 758 Query: 421 ttc 423 ||| Sbjct: 757 ttc 755
>emb|AJ249996.1|LES249996 Lycopersicon esculentum partial mRNA for auxin-responsive protein (ctd1 gene) Length = 454 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 305 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 364 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 87 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 28 Query: 365 gcaacaaacatctcccatgggac 387 | | |||||||||||| ||||| Sbjct: 27 tcgataaacatctcccaggggac 5
>dbj|AK103865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149F09, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 tcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 423 |||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 500 tcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 454
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 377 tcccatgggacgtctccaacaagcatc 403 ||||||||| ||||||||||||||||| Sbjct: 2486 tcccatgggtcgtctccaacaagcatc 2460
>gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174302 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 67 ctgggacacatggtagggaacatcaca 93 |||||||||| |||||||||||||||| Sbjct: 127135 ctgggacacagggtagggaacatcaca 127109
>gb|U18414.1|ATU18414 Arabidopsis thaliana IAA12 (IAA12) gene, complete cds Length = 1125 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 705 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 655
>gb|U18413.1|ATU18413 Arabidopsis thaliana IAA11 (IAA11) gene, complete cds Length = 998 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 361 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 420 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 721 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 662 Query: 421 ttc 423 ||| Sbjct: 661 ttc 659
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 379 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 429 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 91542 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 91592
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 377 tcccatgggacgtctccaacaagcatc 403 ||||||||| ||||||||||||||||| Sbjct: 2228 tcccatgggtcgtctccaacaagcatc 2202
>gb|AY830453.1| Petromyzon marinus SoxE1 (SoxE1) mRNA, complete cds Length = 2434 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 617 ccagcagcagcggtagcagcaggctgctgc 646 ||||||||||| | |||||||||||||||| Sbjct: 1384 ccagcagcagcagcagcagcaggctgctgc 1413
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||| ||||||||||||||||| Sbjct: 552 caggtacggcgccccgtccatgctcacctt 523
>ref|XM_360862.1| Magnaporthe grisea 70-15 predicted protein (MG03405.4) partial mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 613 ggcgccagcagcagcggtagcagcag 638 ||||||||||||||||||||| |||| Sbjct: 427 ggcgccagcagcagcggtagcggcag 452
>ref|XM_808746.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508569.120) partial mRNA Length = 1581 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 613 ggcgccagcagcagcggtagcagcag 638 ||||||||||| |||||||||||||| Sbjct: 538 ggcgccagcagtagcggtagcagcag 563
>emb|AL590009.10| Human DNA sequence from clone RP11-181P4 on chromosome 6 Contains the WASF1 gene for WAS protein family member 1 and part of the FLJ31482 gene, complete sequence Length = 153046 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 70 ggacacatggtagggaacatcacata 95 ||||||||||| |||||||||||||| Sbjct: 123529 ggacacatggtggggaacatcacata 123554
>emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 153211 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 70 ggacacatggtagggaacatcacata 95 ||||||||||||||||||| |||||| Sbjct: 32847 ggacacatggtagggaacaacacata 32872
>emb|AL136367.10| Human DNA sequence from clone RP11-58O2 on chromosome 9q21.33-22.2, complete sequence Length = 76831 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 464 atcttcccctcattcccagttg 485 |||||||||||||||||||||| Sbjct: 47645 atcttcccctcattcccagttg 47624
>gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O3, complete sequence Length = 226416 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 cacatggtagggaacatcacat 94 |||||||||||||||||||||| Sbjct: 87455 cacatggtagggaacatcacat 87476
>gb|AC019018.9|AC019018 Arabidopsis thaliana chromosome 1 BAC F14G24 genomic sequence, complete sequence Length = 126253 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 389 tctccaacaagcatccagtcgccatccttgtcttcgta 426 ||||| || ||||||||||| | ||||||||||||||| Sbjct: 41961 tctccgacgagcatccagtctctatccttgtcttcgta 41998
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 565 caggtagggcgcgccgtccatgctcacctt 594 |||||| ||||| ||||||||||||||||| Sbjct: 554 caggtacggcgccccgtccatgctcacctt 525
>gb|AC162889.2| Mus musculus chromosome 7, clone RP24-373A4, complete sequence Length = 136728 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cacatggtagggaacatcacat 94 |||||||||||||||||||||| Sbjct: 135234 cacatggtagggaacatcacat 135213
>ref|NM_112422.2| Arabidopsis thaliana IAA19; transcription factor AT3G15540 (IAA19) mRNA, complete cds Length = 968 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 agcatccagtcgccatccttgtcttcgta 426 ||||||||||| ||||| ||||||||||| Sbjct: 558 agcatccagtctccatctttgtcttcgta 530
>ref|NM_179697.2| Arabidopsis thaliana IAA8; transcription factor AT2G22670 (IAA8) transcript variant AT2G22670.2 mRNA, complete cds Length = 1344 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 374 atctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 ||||||||||| || || |||||||||||||| || || || || ||||| |||||| Sbjct: 1039 atctcccatggaacatcgccaacaagcatccaatcaccgtctttatcttcataagta 983
>ref|NM_127832.2| Arabidopsis thaliana IAA8; transcription factor AT2G22670 (IAA8) transcript variant AT2G22670.1 mRNA, complete cds Length = 1418 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 374 atctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 430 ||||||||||| || || |||||||||||||| || || || || ||||| |||||| Sbjct: 1091 atctcccatggaacatcgccaacaagcatccaatcaccgtctttatcttcataagta 1035
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 cagcagcagcggtagcagcag 638 ||||||||||||||||||||| Sbjct: 917133 cagcagcagcggtagcagcag 917153
>ref|XM_511043.1| PREDICTED: Pan troglodytes similar to autoantigen RCD8 (LOC454178), mRNA Length = 5256 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 cagcagcagcggtagcagcag 638 ||||||||||||||||||||| Sbjct: 2676 cagcagcagcggtagcagcag 2696
>gb|BC043616.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:50940 IMAGE:6065418), complete cds Length = 4710 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 cagcagcagcggtagcagcag 638 ||||||||||||||||||||| Sbjct: 1984 cagcagcagcggtagcagcag 2004
>gb|BC064567.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:70559 IMAGE:5575195), complete cds Length = 4718 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 cagcagcagcggtagcagcag 638 ||||||||||||||||||||| Sbjct: 1978 cagcagcagcggtagcagcag 1998
>ref|XM_602828.2| PREDICTED: Bos taurus di-N-acetylchitobiase (LOC524503), mRNA Length = 1134 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 614 gcgccagcagcagcggtagcagcag 638 |||||||||||||||| |||||||| Sbjct: 97 gcgccagcagcagcggcagcagcag 73
>gb|AC147390.4| Pan troglodytes BAC clone RP43-51G14 from 7, complete sequence Length = 168525 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 ggacacatggtagggaacatcacataaca 98 ||||||| ||| ||||||||||||||||| Sbjct: 96518 ggacacagggtggggaacatcacataaca 96546
>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence Length = 349992 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 ctgggacacatggtagggaacatca 91 |||||||||| |||||||||||||| Sbjct: 238177 ctgggacacagggtagggaacatca 238201 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,095,748 Number of Sequences: 3902068 Number of extensions: 6095748 Number of successful extensions: 136086 Number of sequences better than 10.0: 542 Number of HSP's better than 10.0 without gapping: 551 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134128 Number of HSP's gapped (non-prelim): 1933 length of query: 664 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 641 effective length of database: 17,143,297,704 effective search space: 10988853828264 effective search space used: 10988853828264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
