>ARR1_ARATH (Q940D0) Two-component response regulator ARR1|
          Length = 690

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K R  WS ELH+QFV A++QLG  + A PK+I ELM V GLT + V SHLQKYR++ RR
Sbjct: 236 KKPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRR 294

Query: 381 APG 373
             G
Sbjct: 295 LGG 297

>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like|
           protein 5)
          Length = 664

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K R  WS ELH+QFV A++QLG  + A PK+I E+M V GLT + V SHLQKYR++ RR
Sbjct: 215 KKPRVVWSVELHQQFVAAVNQLGVDK-AVPKKILEMMNVPGLTRENVASHLQKYRIYLRR 273

Query: 381 APG 373
             G
Sbjct: 274 LGG 276

>ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18|
          Length = 635

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/60 (51%), Positives = 45/60 (75%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K R  WS ELH++FV+A+ QLG  + A PK+I +LM ++GLT + V SHLQKYRL+ ++
Sbjct: 193 KKPRVVWSQELHQKFVSAVQQLGLDK-AVPKKILDLMSIEGLTRENVASHLQKYRLYLKK 251

>ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14|
          Length = 382

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 33/63 (52%), Positives = 46/63 (73%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K+R  WS ELH+QFV A+++LG  + A PK+I ELM V GL+ + V SHLQK+RL+ +R
Sbjct: 199 KKSRVVWSIELHQQFVNAVNKLGIDK-AVPKRILELMNVPGLSRENVASHLQKFRLYLKR 257

Query: 381 APG 373
             G
Sbjct: 258 LSG 260

>ARR12_ARATH (P62598) Two-component response regulator ARR12|
          Length = 596

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K R  W+ ELH++FV A++QLG  + A PK+I +LM V+ LT + V SHLQK+RL+ +R
Sbjct: 194 KKQRVVWTVELHKKFVAAVNQLGYEK-AMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252

Query: 381 APGSPVANRPIVL 343
             G  VAN+  ++
Sbjct: 253 ISG--VANQQAIM 263

>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like|
           protein 3)
          Length = 521

 Score = 63.2 bits (152), Expect = 7e-10
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +KAR  WS ELH +FV A++Q+G    A PK+I +LM V  LT + V SHLQKYRL+  R
Sbjct: 192 KKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSR 251

>MYBF_ARATH (Q700D9) Putative Myb family transcription factor At1g14600|
          Length = 255

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = -2

Query: 543 WSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYR 397
           W+PELHR FV A+  LGG   ATPK + ++M V GLT   VKSHLQ YR
Sbjct: 28  WTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76

>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2|
           (Pseudo-response regulator 2) (TOC2 protein)
          Length = 535

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -2

Query: 543 WSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNR 385
           W+PELH++FV A+ QLG  Q A P +I ELMKV  LT   V SHLQK+R H +
Sbjct: 301 WTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVGTLTRHNVASHLQKFRQHRK 352

>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like|
           protein 4)
          Length = 552

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K R  W+ ELH +F+ A+  LG  + A PK+I +LM VD LT + V SHLQK+R+  ++
Sbjct: 182 KKPRVLWTHELHNKFLAAVDHLGVER-AVPKKILDLMNVDKLTRENVASHLQKFRVALKK 240

Query: 381 APGSPV--ANRPIV 346
                +  ANR  +
Sbjct: 241 VSDDAIQQANRAAI 254

>ARR20_ARATH (Q9LZJ8) Putative two-component response regulator ARR20|
          Length = 426

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQI----RELMKVDGLTNDEVKSHLQKYRL 394
           +K R  W+PELH +F  A+ ++G  + A PK I    +E + V GLT + V SHLQKYR 
Sbjct: 210 KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQ 269

Query: 393 HNRR 382
            +++
Sbjct: 270 SSKK 273

>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19|
          Length = 407

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIREL---MKVDGLTNDEVKSHLQKYRLH 391
           RK R  W+ ELH++F+ A+  +GG + A PK + E    M+++G+T   V SHLQK+R++
Sbjct: 214 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 273

>ARR21_ARATH (Q9LYP5) Putative two-component response regulator ARR21|
          Length = 592

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K +  W+  LH  F+ A+  +G  + A PK+I   M V  LT + V SHLQKYR+  RR
Sbjct: 221 KKKKIQWTDSLHDLFLQAIRHIGLDK-AVPKKILAFMSVPYLTRENVASHLQKYRIFLRR 279

>APRR4_ARATH (Q9FJ16) Putative two-component response regulator-like APRR4|
           (Pseudo-response regulator 4)
          Length = 292

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQ 406
           +K R  W  ELH+ F+ A+  LG  + A PK+I ++MKVD ++ + V SHLQ
Sbjct: 222 KKRRVVWDEELHQNFLNAVDFLGLER-AVPKKILDVMKVDYISRENVASHLQ 272

>ARR13_ARATH (Q9ZVD3) Putative two-component response regulator ARR13|
          Length = 572

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = -2

Query: 561 RKARRCWSPELHRQFVTALHQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHNRR 382
           +K +  W+  L   F+ A+  +G  +V  PK+I  +M V  LT + V SHLQKYRL  +R
Sbjct: 224 KKKKIWWTNPLQDLFLQAIQHIGYDKVV-PKKILAIMNVPYLTRENVASHLQKYRLFVKR 282

>YDGC_SHIFL (P0ACX2) Inner membrane protein ydgC|
          Length = 111

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 413 WLFTSSLVRPSTFINSLICFGVATW 487
           W FT  +  P+ F+ S+ C+G++ W
Sbjct: 77  WYFTGMMRLPAAFVGSVACWGISAW 101

>YDGC_ECOLI (P0ACX0) Inner membrane protein ydgC|
          Length = 111

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 413 WLFTSSLVRPSTFINSLICFGVATW 487
           W FT  +  P+ F+ S+ C+G++ W
Sbjct: 77  WYFTGMMRLPAAFVGSVACWGISAW 101

>YDGC_ECO57 (P0ACX1) Inner membrane protein ydgC|
          Length = 111

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 413 WLFTSSLVRPSTFINSLICFGVATW 487
           W FT  +  P+ F+ S+ C+G++ W
Sbjct: 77  WYFTGMMRLPAAFVGSVACWGISAW 101

>GTR8_BOVIN (P58354) Solute carrier family 2, facilitated glucose transporter|
           member 8 (Glucose transporter type 8) (Glucose
           transporter type X1)
          Length = 478

 Score = 25.0 bits (53), Expect(2) = 6.7
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 264 LTSVGGPEVTPLTGSCFAPELSRALP*ARSAGWLPE--ILAPFGC 392
           ++ +  PEV  L GSC    +   +  A  AGW+ E   LA  GC
Sbjct: 145 ISEIAYPEVRGLLGSCVQLMVVTGILLAYLAGWVLEWRWLAVLGC 189



 Score = 23.5 bits (49), Expect(2) = 6.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 407 WRWLFTSSLVRPSTFINSLICF 472
           WRWL     V PS F+  L+CF
Sbjct: 181 WRWLAVLGCVPPS-FMLLLMCF 201

>RS8_OCEIH (Q8ETW9) 30S ribosomal protein S8|
          Length = 132

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 7   PLSDVLT**QPXFISKHSRLDLPAYN-KKDYTTILSQE 117
           P++D+LT  +   + KH +L+LPA N KK+   IL +E
Sbjct: 6   PIADMLTRIRNANMVKHEKLELPASNIKKEIADILKRE 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,763,560
Number of Sequences: 219361
Number of extensions: 1892761
Number of successful extensions: 5691
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5655
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)