ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16a15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479727.1| Oryza sativa (japonica cultivar-group), mRNA 385 e-103
2gb|BT017432.1| Zea mays clone EL01N0403E05.c mRNA sequence 220 4e-54
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
4dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
5ref|NM_179596.1| Arabidopsis thaliana nucleic acid binding AT2G0... 54 5e-04
6ref|NM_126313.2| Arabidopsis thaliana nucleic acid binding AT2G0... 54 5e-04
7gb|BT004365.1| Arabidopsis thaliana clone U20217 unknown protein... 54 5e-04
8gb|BT002938.1| Arabidopsis thaliana clone RAFL14-97-K11 (R20217)... 54 5e-04
9gb|BT015593.1| Arabidopsis thaliana At2g02570 mRNA sequence 48 0.030
10gb|DQ471170.1| Taphrina deformans isolate AFTOL-ID 1234 RNA poly... 44 0.47
11gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genom... 44 0.47
12emb|BX005054.7| Zebrafish DNA sequence from clone DKEY-209N16 in... 42 1.8
13dbj|AB083655.3| Bacillus cereus plasmid pBC-Tim DNA, complete se... 42 1.8
14ref|NM_001035878.1| Arabidopsis thaliana nucleic acid binding AT... 40 7.3
15gb|AC123613.16| Mus musculus chromosome 1, clone RP23-434L2, com... 40 7.3
16ref|NM_184052.1| Mus musculus insulin-like growth factor 1 (Igf1... 40 7.3
17gb|AC158379.5| Mus musculus BAC clone RP24-497L12 from chromosom... 40 7.3
18gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome... 40 7.3
19gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, comp... 40 7.3
20emb|AL136999.26| Human DNA sequence from clone RP11-187E23 on ch... 40 7.3
21gb|AC157587.7| Mus musculus BAC clone RP24-199E1 from chromosome... 40 7.3
22gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, compl... 40 7.3
23dbj|AK052033.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 7.3
24dbj|AK050118.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 40 7.3
25dbj|AK038119.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 7.3
26gb|AC007024.4|AC007024 Homo sapiens PAC clone RP4-664A21 from 7p... 40 7.3
27gb|AY085798.1| Arabidopsis thaliana clone 18284 mRNA, complete s... 40 7.3
28gb|AC091312.8| Mus musculus chromosome 3, clone RP23-333N1, comp... 40 7.3
29gb|AC002422.1|AC002422 Human Chromosome X, complete sequence 40 7.3 
>ref|XM_479727.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 894

 Score =  385 bits (194), Expect = e-103
 Identities = 332/379 (87%), Gaps = 1/379 (0%)
 Strand = Plus / Minus

                                                                       
Query: 161 aagaaccatccttgagtatgaaggtgcttntccctcctctggaagtcggtcaggcctttc 220
           |||| ||||||||||| ||| |||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 871 aagagccatccttgag-atggaggtgcttctcccttctctggaactcggtaaggcctttc 813

                                                                       
Query: 221 ccgctaccagtgacccccaccttacctntgtgatcttctgntgacttgaagatgctntcc 280
           ||||| |||||||| || ||||||||| ||||||| || | ||||||||||||||| |||
Sbjct: 812 ccgctcccagtgacaccgaccttacctctgtgatcatccggtgacttgaagatgctctcc 753

                                                                       
Query: 281 tttttgcgaccggaaaagaatccaaccttcttagcctttcctttggtagnctggaactgt 340
           |||||||||||||||||||| |||||||| || || || |||||||| |  |||||||| 
Sbjct: 752 tttttgcgaccggaaaagaacccaacctttttggctttccctttggtcgtttggaactgc 693

                                                                       
Query: 341 tgncatgcattctgccgcttattctgtgcgaattctagttgctcaaagcgggcttttgac 400
           || ||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 692 tgccatgcattctgcctcttattttgtgcaaattctagctgctcaaagcgggcttttgac 633

                                                                       
Query: 401 ttgaaagcatggatcttcttacgctttgcagttntcacatcttcaggatcatttggatcg 460
           ||||| ||||||||||||||||||||||  | | ||||||| || |||||||||||||||
Sbjct: 632 ttgaatgcatggatcttcttacgctttgtggctttcacatcctccggatcatttggatcg 573

                                                                       
Query: 461 atcttaagtttcgtgggtaagctacgaatctgatagtcagatgttgctgcttgttcaact 520
           ||    ||||| |||||||||||||| |||||| |||||||||||||||| ||||||| |
Sbjct: 572 atacggagtttggtgggtaagctacgcatctgaaagtcagatgttgctgcctgttcaatt 513

                              
Query: 521 tttctctttaatgccattt 539
           || ||||||| ||||||||
Sbjct: 512 ttcctctttattgccattt 494
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>gb|BT017432.1| Zea mays clone EL01N0403E05.c mRNA sequence
          Length = 1145

 Score =  220 bits (111), Expect = 4e-54
 Identities = 293/355 (82%), Gaps = 3/355 (0%)
 Strand = Plus / Minus

                                                                       
Query: 185 tgcttntccctcctctggaagtcggtcaggcctttcccgctaccagtgacccccacctta 244
           ||||| |||||||||||||||||||||||||| || || || |||||||| |||||||||
Sbjct: 924 tgcttctccctcctctggaagtcggtcaggcccttgccactcccagtgacacccacctta 865

                                                                       
Query: 245 cctntgtgatcttctgntgacttgaagatgctntcctttttgcgaccggaaaagaatcca 304
           ||| |||| || || | ||||||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 864 cctctgtggtcgtccggtgacttgaagatgctctccttcttgcgaccggagaagaacccc 805

                                                                       
Query: 305 accttcttagcctttcctttggtagnctggaactgttgncatgcattctgccgcttattc 364
           ||||| || || || || |||||    || ||||| || |||||||||||||  || || 
Sbjct: 804 acctttttggctttccccttggt---ttgaaactgctgccatgcattctgccttttgttt 748

                                                                       
Query: 365 tgtgcgaattctagttgctcaaagcgggcttttgacttgaaagcatggatcttcttacgc 424
           || || ||||| || ||||||||||||| |||||| ||||||||||| || |||||||||
Sbjct: 747 tgggcaaattcaagctgctcaaagcgggattttgatttgaaagcatgtattttcttacgc 688

                                                                       
Query: 425 tttgcagttntcacatcttcaggatcatttggatcgatcttaagtttcgtgggtaagcta 484
           ||||||| | | ||||| ||||| ||| |||| |||||   |||||| |  || ||||||
Sbjct: 687 tttgcagctttaacatcctcagggtcacttggttcgatacgaagtttggcaggcaagcta 628

                                                                  
Query: 485 cgaatctgatagtcagatgttgctgcttgttcaacttttctctttaatgccattt 539
           ||   |||| | |||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 627 cgcgcctgaaaatcagatgttgctgcttgttcaattttcctctttattgccattt 573
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  167 bits (84), Expect = 5e-38
 Identities = 132/148 (89%), Gaps = 1/148 (0%)
 Strand = Plus / Plus

                                                                          
Query: 161    aagaaccatccttgagtatgaaggtgcttntccctcctctggaagtcggtcaggcctttc 220
              |||| ||||||||||| ||| |||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 507618 aagagccatccttgag-atggaggtgcttctcccttctctggaactcggtaaggcctttc 507676

                                                                          
Query: 221    ccgctaccagtgacccccaccttacctntgtgatcttctgntgacttgaagatgctntcc 280
              ||||| |||||||| || ||||||||| ||||||| || | ||||||||||||||| |||
Sbjct: 507677 ccgctcccagtgacaccgaccttacctctgtgatcatccggtgacttgaagatgctctcc 507736

                                          
Query: 281    tttttgcgaccggaaaagaatccaacct 308
              |||||||||||||||||||| |||||||
Sbjct: 507737 tttttgcgaccggaaaagaacccaacct 507764



 Score =  141 bits (71), Expect = 3e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                          
Query: 320    cctttggtagnctggaactgttgncatgcattctgccgcttattctgtgcgaattctagt 379
              |||||||| |  |||||||| || ||||||||||||| |||||| ||||| |||||||| 
Sbjct: 508040 cctttggtcgtttggaactgctgccatgcattctgcctcttattttgtgcaaattctagc 508099

                                                               
Query: 380    tgctcaaagcgggcttttgacttgaaagcatggatcttcttacgctttg 428
              |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 508100 tgctcaaagcgggcttttgacttgaatgcatggatcttcttacgctttg 508148



 Score =  103 bits (52), Expect = 6e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                          
Query: 436    cacatcttcaggatcatttggatcgatcttaagtttcgtgggtaagctacgaatctgata 495
              |||||| || |||||||||||||||||    ||||| |||||||||||||| |||||| |
Sbjct: 508567 cacatcctccggatcatttggatcgatacggagtttggtgggtaagctacgcatctgaaa 508626

                                                          
Query: 496    gtcagatgttgctgcttgttcaacttttctctttaatgccattt 539
              ||||||||||||||| ||||||| ||| ||||||| ||||||||
Sbjct: 508627 gtcagatgttgctgcctgttcaattttcctctttattgccattt 508670
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0007D08
          Length = 183142

 Score =  167 bits (84), Expect = 5e-38
 Identities = 132/148 (89%), Gaps = 1/148 (0%)
 Strand = Plus / Plus

                                                                         
Query: 161   aagaaccatccttgagtatgaaggtgcttntccctcctctggaagtcggtcaggcctttc 220
             |||| ||||||||||| ||| |||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 97578 aagagccatccttgag-atggaggtgcttctcccttctctggaactcggtaaggcctttc 97636

                                                                         
Query: 221   ccgctaccagtgacccccaccttacctntgtgatcttctgntgacttgaagatgctntcc 280
             ||||| |||||||| || ||||||||| ||||||| || | ||||||||||||||| |||
Sbjct: 97637 ccgctcccagtgacaccgaccttacctctgtgatcatccggtgacttgaagatgctctcc 97696

                                         
Query: 281   tttttgcgaccggaaaagaatccaacct 308
             |||||||||||||||||||| |||||||
Sbjct: 97697 tttttgcgaccggaaaagaacccaacct 97724



 Score =  141 bits (71), Expect = 3e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                         
Query: 320   cctttggtagnctggaactgttgncatgcattctgccgcttattctgtgcgaattctagt 379
             |||||||| |  |||||||| || ||||||||||||| |||||| ||||| |||||||| 
Sbjct: 98000 cctttggtcgtttggaactgctgccatgcattctgcctcttattttgtgcaaattctagc 98059

                                                              
Query: 380   tgctcaaagcgggcttttgacttgaaagcatggatcttcttacgctttg 428
             |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98060 tgctcaaagcgggcttttgacttgaatgcatggatcttcttacgctttg 98108



 Score =  103 bits (52), Expect = 6e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                         
Query: 436   cacatcttcaggatcatttggatcgatcttaagtttcgtgggtaagctacgaatctgata 495
             |||||| || |||||||||||||||||    ||||| |||||||||||||| |||||| |
Sbjct: 98527 cacatcctccggatcatttggatcgatacggagtttggtgggtaagctacgcatctgaaa 98586

                                                         
Query: 496   gtcagatgttgctgcttgttcaacttttctctttaatgccattt 539
             ||||||||||||||| ||||||| ||| ||||||| ||||||||
Sbjct: 98587 gtcagatgttgctgcctgttcaattttcctctttattgccattt 98630
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>ref|NM_179596.1| Arabidopsis thaliana nucleic acid binding AT2G02570 transcript
           variant AT2G02570.2 mRNA, complete cds
          Length = 1180

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 401 ttgaaagcatggatcttcttacgctttgcagttntcacatcttcaggatcatttggatcg 460
           ||||||||||| |||||||||||||| ||  || | ||||| || |||||||| ||||||
Sbjct: 759 ttgaaagcatgtatcttcttacgcttagctatttttacatcctcgggatcattaggatcg 700

             
Query: 461 at 462
           ||
Sbjct: 699 at 698
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>ref|NM_126313.2| Arabidopsis thaliana nucleic acid binding AT2G02570 transcript
           variant AT2G02570.1 mRNA, complete cds
          Length = 1228

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 401 ttgaaagcatggatcttcttacgctttgcagttntcacatcttcaggatcatttggatcg 460
           ||||||||||| |||||||||||||| ||  || | ||||| || |||||||| ||||||
Sbjct: 759 ttgaaagcatgtatcttcttacgcttagctatttttacatcctcgggatcattaggatcg 700

             
Query: 461 at 462
           ||
Sbjct: 699 at 698
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>gb|BT004365.1| Arabidopsis thaliana clone U20217 unknown protein (At2g02570) mRNA,
           complete cds
          Length = 933

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 377 agttgctcaaagcgggcttttgacttgaaagcatggatcttcttacgctttgcagttntc 436
           ||||||||||| |  || || || ||||||||||| |||||||||||||| ||  || | 
Sbjct: 668 agttgctcaaaccttgccttggatttgaaagcatgtatcttcttacgcttagctattttt 609

                                     
Query: 437 acatcttcaggatcatttggatcgat 462
           ||||| || |||||||| ||||||||
Sbjct: 608 acatcctcgggatcattaggatcgat 583
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>gb|BT002938.1| Arabidopsis thaliana clone RAFL14-97-K11 (R20217) unknown protein
           (At2g02570) mRNA, complete cds
          Length = 1252

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 401 ttgaaagcatggatcttcttacgctttgcagttntcacatcttcaggatcatttggatcg 460
           ||||||||||| |||||||||||||| ||  || | ||||| || |||||||| ||||||
Sbjct: 759 ttgaaagcatgtatcttcttacgcttagctatttttacatcctcgggatcattaggatcg 700

             
Query: 461 at 462
           ||
Sbjct: 699 at 698
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>gb|BT015593.1| Arabidopsis thaliana At2g02570 mRNA sequence
          Length = 864

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 404 aaagcatggatcttcttacgctttgcagttntcacatcttcaggatcatttggatcgat 462
           |||||||| |||||||||||||| ||  || | ||||| || |||||||| ||||||||
Sbjct: 638 aaagcatgtatcttcttacgcttagctatttttacatcctcgggatcattaggatcgat 580
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>gb|DQ471170.1| Taphrina deformans isolate AFTOL-ID 1234 RNA polymerase II subunit
           1 (RPB1) gene, partial sequence
          Length = 648

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 446 ggatcatttggatcgatcttaagttt 471
           |||||||||| |||||||||||||||
Sbjct: 116 ggatcatttgcatcgatcttaagttt 91
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>gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genomic sequence, complete
             sequence
          Length = 98957

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 401   ttgaaagcatggatcttcttacgctt 426
             ||||||||||| ||||||||||||||
Sbjct: 54275 ttgaaagcatgtatcttcttacgctt 54250
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>emb|BX005054.7| Zebrafish DNA sequence from clone DKEY-209N16 in linkage group 6,
              complete sequence
          Length = 230686

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    tccccagaaagaaccatcctt 173
              |||||||||||||||||||||
Sbjct: 191328 tccccagaaagaaccatcctt 191348
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>dbj|AB083655.3| Bacillus cereus plasmid pBC-Tim DNA, complete sequence
          Length = 8983

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 443  tcaggatcatttggatcgatcttaa 467
            ||||||||||||||||| |||||||
Sbjct: 3824 tcaggatcatttggatctatcttaa 3848
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>ref|NM_001035878.1| Arabidopsis thaliana nucleic acid binding AT2G02570 transcript
           variant AT2G02570.3 mRNA, complete cds
          Length = 1258

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                  
Query: 408 catggatcttcttacgctttgcagttntcacatcttcaggatcatttggatcgat 462
           |||| |||||||||||||| ||  || | ||||| || |||||||| ||||||||
Sbjct: 752 catgtatcttcttacgcttagctatttttacatcctcgggatcattaggatcgat 698
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>gb|AC123613.16| Mus musculus chromosome 1, clone RP23-434L2, complete sequence
          Length = 204785

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 262    tgacttgaagatgctntcctttt 284
              ||||||||||||||| |||||||
Sbjct: 118412 tgacttgaagatgctgtcctttt 118390
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>ref|NM_184052.1| Mus musculus insulin-like growth factor 1 (Igf1), transcript
           variant 2, mRNA
          Length = 2170

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 506 gctgcttgttcaacttttctcttt 529
           ||||||||| ||||||||||||||
Sbjct: 62  gctgcttgtccaacttttctcttt 85
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>gb|AC158379.5| Mus musculus BAC clone RP24-497L12 from chromosome 5, complete sequence
          Length = 209526

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 262   tgacttgaagatgctntcctttt 284
             ||||||||||||||| |||||||
Sbjct: 51022 tgacttgaagatgctgtcctttt 51000
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>gb|AC125082.3| Mus musculus BAC clone RP24-90M24 from chromosome 10, complete sequence
          Length = 226256

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 506   gctgcttgttcaacttttctcttt 529
             ||||||||| ||||||||||||||
Sbjct: 22806 gctgcttgtccaacttttctcttt 22783
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>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence
          Length = 232416

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 123    aaccaganttattcctcatggtc 145
              ||||||| |||||||||||||||
Sbjct: 147901 aaccagacttattcctcatggtc 147923
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>emb|AL136999.26| Human DNA sequence from clone RP11-187E23 on chromosome 13q21.31-21.33
             Contains STSs, GSSs and a CpG island, complete sequence
          Length = 171359

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   ttttctctttaatgccattt 539
             ||||||||||||||||||||
Sbjct: 37130 ttttctctttaatgccattt 37111
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>gb|AC157587.7| Mus musculus BAC clone RP24-199E1 from chromosome 5, complete sequence
          Length = 188787

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 262    tgacttgaagatgctntcctttt 284
              ||||||||||||||| |||||||
Sbjct: 147444 tgacttgaagatgctgtcctttt 147422
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>gb|AC106822.3| Homo sapiens chromosome 5 clone RP11-772C9, complete sequence
          Length = 115988

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   acttttctctttaatgccat 537
             ||||||||||||||||||||
Sbjct: 44114 acttttctctttaatgccat 44095
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>dbj|AK052033.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230038E15
           product:unclassifiable, full insert sequence
          Length = 3525

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 506 gctgcttgttcaacttttctcttt 529
           ||||||||| ||||||||||||||
Sbjct: 827 gctgcttgtccaacttttctcttt 850
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>dbj|AK050118.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched
            library, clone:C730016P09 product:unclassifiable, full
            insert sequence
          Length = 3724

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 506  gctgcttgttcaacttttctcttt 529
            ||||||||| ||||||||||||||
Sbjct: 1024 gctgcttgtccaacttttctcttt 1047
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>dbj|AK038119.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130080F01 product:insulin-like
           growth factor 1, full insert sequence
          Length = 2170

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 506 gctgcttgttcaacttttctcttt 529
           ||||||||| ||||||||||||||
Sbjct: 62  gctgcttgtccaacttttctcttt 85
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>gb|AC007024.4|AC007024 Homo sapiens PAC clone RP4-664A21 from 7p15, complete sequence
          Length = 83848

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 518  acttttctctttaatgccat 537
            ||||||||||||||||||||
Sbjct: 3086 acttttctctttaatgccat 3105
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>gb|AY085798.1| Arabidopsis thaliana clone 18284 mRNA, complete sequence
          Length = 733

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 accggaaaagaatccaacct 308
           ||||||||||||||||||||
Sbjct: 438 accggaaaagaatccaacct 419
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>gb|AC091312.8| Mus musculus chromosome 3, clone RP23-333N1, complete sequence
          Length = 199026

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 123    aaccaganttattcctcatggtc 145
              ||||||| |||||||||||||||
Sbjct: 177979 aaccagacttattcctcatggtc 177957
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>gb|AC002422.1|AC002422 Human Chromosome X, complete sequence
          Length = 160091

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   cttagcctttcctttggtag 329
             ||||||||||||||||||||
Sbjct: 73271 cttagcctttcctttggtag 73290


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,438,909
Number of Sequences: 3902068
Number of extensions: 3438909
Number of successful extensions: 61800
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61738
Number of HSP's gapped (non-prelim): 57
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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