Clone Name | rbasd16a11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | REEP3_MOUSE (Q99KK1) Receptor expression-enhancing protein 3 | 28 | 9.0 | 2 | REEP3_HUMAN (Q6NUK4) Receptor expression-enhancing protein 3 | 28 | 9.0 |
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>REEP3_MOUSE (Q99KK1) Receptor expression-enhancing protein 3| Length = 254 Score = 27.7 bits (60), Expect = 9.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 135 RRPVVATAMIYPTYYSLRLVKVKW*VHICXMGKHYDKYTYIWI 7 R V+ M+YP YYS + VK K K Y ++ WI Sbjct: 8 RAVVLVFGMLYPAYYSYKAVKTK-------NVKEYVRWMMYWI 43
>REEP3_HUMAN (Q6NUK4) Receptor expression-enhancing protein 3| Length = 255 Score = 27.7 bits (60), Expect = 9.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 135 RRPVVATAMIYPTYYSLRLVKVKW*VHICXMGKHYDKYTYIWI 7 R V+ M+YP YYS + VK K K Y ++ WI Sbjct: 8 RAVVLVFGMLYPAYYSYKAVKTK-------NVKEYVRWMMYWI 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,472,929 Number of Sequences: 219361 Number of extensions: 319637 Number of successful extensions: 673 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 669 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 673 length of database: 80,573,946 effective HSP length: 26 effective length of database: 74,870,560 effective search space used: 1796893440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)