ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY154787.1| Thlaspi perfoliatum isolate Mperf15ITS tRNA-Leu (... 46 0.11
2ref|XM_719798.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 44 0.45
3gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, comple... 44 0.45
4gb|AC112916.3| Homo sapiens X BAC RP11-765I9 (Roswell Park Cance... 44 0.45
5gb|AC122706.3| Homo sapiens chromosome 5 clone RP11-114I23, comp... 44 0.45
6gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, c... 44 0.45
7gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, co... 44 0.45
8emb|CT476800.3| RP43-013D05, complete sequence 44 0.45
9ref|NM_114656.2| Arabidopsis thaliana binding AT3G47860 mRNA, co... 42 1.8
10emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on chrom... 42 1.8
11emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chr... 42 1.8
12emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chr... 42 1.8
13emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.8
14gb|U84245.1|RNU84245 Rattus norvegicus Y4 receptor gene, complet... 42 1.8
15gb|AY044334.1| Arabidopsis thaliana putative protein (T23J7.190)... 42 1.8
16dbj|AK050863.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 1.8
17ref|NM_031581.1| Rattus norvegicus pancreatic polypeptide recept... 42 1.8
18emb|Z68180.1|RNPP1GN R.norvegicus pancreatic polypeptide recepto... 42 1.8
19gb|U42388.1|RNU42388 Rattus norvegicus panceatic polypeptide rec... 42 1.8
20ref|XM_550305.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
21ref|XM_470551.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
22ref|XM_473791.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
23gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, comple... 40 7.0
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.0
25gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's H... 40 7.0
26gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complet... 40 7.0
27gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, comple... 40 7.0
28emb|BX936363.13| Zebrafish DNA sequence from clone CH211-112P19 ... 40 7.0
29gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 7.0
30emb|AL359259.18| Human DNA sequence from clone RP11-182B22 on ch... 40 7.0
31emb|AL049712.12|HSDJ686C3 Human DNA sequence from clone RP4-686C... 40 7.0
32emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
33emb|CR628365.6| Zebrafish DNA sequence from clone CH211-137O16 i... 40 7.0
34emb|CR628392.7| Zebrafish DNA sequence from clone CH211-209N13 i... 40 7.0
35emb|BX120000.8| Zebrafish DNA sequence from clone CH211-214C13 i... 40 7.0
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
39gb|AC112235.4| Homo sapiens BAC clone RP11-285D1 from 2, complet... 40 7.0
40dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41emb|BX255905.4| Zebrafish DNA sequence from clone DKEY-11B8 in l... 40 7.0
42emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in... 40 7.0
43emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in ... 40 7.0
44tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete int... 40 7.0
45emb|CT033785.8| Mouse DNA sequence from clone RP23-445G17 on chr... 40 7.0
46emb|AL929267.14| Zebrafish DNA sequence from clone CH211-2M15 in... 40 7.0
47gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, comple... 40 7.0
48gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
49emb|AJ001752.1|VFGLB3 Vicia faba L. Kleine Thueringer 40 7.0 
>gb|AY154787.1| Thlaspi perfoliatum isolate Mperf15ITS tRNA-Leu (trnL) gene and
           trnL-trnF intergenic spacer, partial sequence;
           chloroplast
          Length = 736

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 tagtaaatgaataaagtgttggaccgg 495
           ||||||||||| |||||||||||||||
Sbjct: 658 tagtaaatgaaaaaagtgttggaccgg 632
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>ref|XM_719798.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04575)
           partial mRNA
          Length = 3591

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 410 taattataatgcaaatgattttgtta 435
           |||||||||||||||||||| |||||
Sbjct: 144 taattataatgcaaatgattatgtta 169
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>gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, complete sequence
          Length = 138824

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 350   ttcagaatatcatacaaataaa 371
             ||||||||||||||||||||||
Sbjct: 26958 ttcagaatatcatacaaataaa 26937
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>gb|AC112916.3| Homo sapiens X BAC RP11-765I9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172457

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 419    tgcaaatgattttgttatgttt 440
              ||||||||||||||||||||||
Sbjct: 142847 tgcaaatgattttgttatgttt 142826
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>gb|AC122706.3| Homo sapiens chromosome 5 clone RP11-114I23, complete sequence
          Length = 118762

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 350   ttcagaatatcatacaaataaa 371
             ||||||||||||||||||||||
Sbjct: 10303 ttcagaatatcatacaaataaa 10324
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>gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, complete sequence
          Length = 76158

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 76    gaaagcattcaccaaacttccagaat 101
             ||||||||| ||||||||||||||||
Sbjct: 22245 gaaagcatttaccaaacttccagaat 22220
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>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 76     gaaagcattcaccaaacttccagaat 101
              ||||||||| ||||||||||||||||
Sbjct: 149048 gaaagcatttaccaaacttccagaat 149023
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>emb|CT476800.3| RP43-013D05, complete sequence
          Length = 207013

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 419    tgcaaatgattttgttatgttt 440
              ||||||||||||||||||||||
Sbjct: 202425 tgcaaatgattttgttatgttt 202404
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>ref|NM_114656.2| Arabidopsis thaliana binding AT3G47860 mRNA, complete cds
          Length = 1162

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 92   cttccagaatcaaaacactct 112
            |||||||||||||||||||||
Sbjct: 1141 cttccagaatcaaaacactct 1161
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>emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on chromosome 10 Contains a
             novel gene and a novel MAM domain containing protein,
             complete sequence
          Length = 150889

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 404   gcgatgtaattataatgcaaatgattttgttat 436
             ||||||||||||||| ||||||| ||| |||||
Sbjct: 98424 gcgatgtaattataaggcaaatggtttggttat 98392
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>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a
             pseudogene similar to part of a zinc finger protein, two
             novel pseudogenes, a novel gene similar to DKFZP434I1117,
             a novel pseudogene (FLJ23476), two novel gene, a novel
             gene similar to MGC12954 and four CpG islands, complete
             sequence
          Length = 186108

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   gaggcttcatttgggtactaa 192
             |||||||||||||||||||||
Sbjct: 10135 gaggcttcatttgggtactaa 10115
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>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a
             novel gene, the Pafah1b1 gene for platelet-activating
             factor acetylhydrolase isoform 1b beta1 subunit, the 5'
             end of a novel gene and two CpG islands, complete sequence
          Length = 137908

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   ttgtgaataataatatgaacc 318
             |||||||||||||||||||||
Sbjct: 72702 ttgtgaataataatatgaacc 72722
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>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7
          Length = 92493

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    cttccagaatcaaaacactct 112
             |||||||||||||||||||||
Sbjct: 80883 cttccagaatcaaaacactct 80863
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>gb|U84245.1|RNU84245 Rattus norvegicus Y4 receptor gene, complete cds
          Length = 1128

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 255 aaatgaaccagatgaccacaa 275
           |||||||||||||||||||||
Sbjct: 499 aaatgaaccagatgaccacaa 479
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>gb|AY044334.1| Arabidopsis thaliana putative protein (T23J7.190) mRNA, complete cds
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 92   cttccagaatcaaaacactct 112
            |||||||||||||||||||||
Sbjct: 1122 cttccagaatcaaaacactct 1142
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>dbj|AK050863.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030026P09
            product:unclassifiable, full insert sequence
          Length = 3314

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 298  ttgtgaataataatatgaacc 318
            |||||||||||||||||||||
Sbjct: 2843 ttgtgaataataatatgaacc 2823
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>ref|NM_031581.1| Rattus norvegicus pancreatic polypeptide receptor 1 (Ppyr1), mRNA
          Length = 1259

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 255 aaatgaaccagatgaccacaa 275
           |||||||||||||||||||||
Sbjct: 562 aaatgaaccagatgaccacaa 542
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>emb|Z68180.1|RNPP1GN R.norvegicus pancreatic polypeptide receptor PP1 gene
          Length = 1209

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 255 aaatgaaccagatgaccacaa 275
           |||||||||||||||||||||
Sbjct: 535 aaatgaaccagatgaccacaa 515
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>gb|U42388.1|RNU42388 Rattus norvegicus panceatic polypeptide receptor mRNA, complete cds
          Length = 1259

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 255 aaatgaaccagatgaccacaa 275
           |||||||||||||||||||||
Sbjct: 562 aaatgaaccagatgaccacaa 542
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>ref|XM_550305.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4284

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  aattataatgcaaatgattt 430
            ||||||||||||||||||||
Sbjct: 2755 aattataatgcaaatgattt 2774
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>ref|XM_470551.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 411 aattataatgcaaatgattt 430
           ||||||||||||||||||||
Sbjct: 208 aattataatgcaaatgattt 227
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>ref|XM_473791.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2091

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 411 aattataatgcaaatgattt 430
           ||||||||||||||||||||
Sbjct: 208 aattataatgcaaatgattt 227
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>gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, complete sequence
          Length = 1735

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 tgcaaatgattttgttatgt 438
           ||||||||||||||||||||
Sbjct: 583 tgcaaatgattttgttatgt 602
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 411     aattataatgcaaatgattt 430
               ||||||||||||||||||||
Sbjct: 4278922 aattataatgcaaatgattt 4278903
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>gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216935

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aacttcacaaatgcatttgc 21
              ||||||||||||||||||||
Sbjct: 101699 aacttcacaaatgcatttgc 101680
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>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence
          Length = 223068

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   agctgttcaagctacataaa 227
             ||||||||||||||||||||
Sbjct: 13562 agctgttcaagctacataaa 13581
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>gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, complete sequence
          Length = 163125

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 72     tttggaaagcattcaccaaacttccaga 99
              ||||||||||||||| | ||||||||||
Sbjct: 101409 tttggaaagcattcagccaacttccaga 101436
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>emb|BX936363.13| Zebrafish DNA sequence from clone CH211-112P19 in linkage group 11,
             complete sequence
          Length = 184849

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   aaataaacacaattttgcca 384
             ||||||||||||||||||||
Sbjct: 30289 aaataaacacaattttgcca 30308
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     tacaaataaacacaattttg 381
               ||||||||||||||||||||
Sbjct: 1879630 tacaaataaacacaattttg 1879649
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>emb|AL359259.18| Human DNA sequence from clone RP11-182B22 on chromosome 1 Contains the
             3' end of the MTR gene for
             5-methyltetrahydrofolate-homocysteine methyltransferase, a
             novel gene (LOC149448), a ribosomal protein L35 (RPL35)
             pseudogene, and a novel gene similar to metallothionein 1H
             (MT1H), complete sequence
          Length = 172753

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   atgcaaatgattttgttatg 437
             ||||||||||||||||||||
Sbjct: 22628 atgcaaatgattttgttatg 22609
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>emb|AL049712.12|HSDJ686C3 Human DNA sequence from clone RP4-686C3 on chromosome 20 Contains the
             IDH3B gene for isocitrate dehydrogenase 3 (NAD+) beta, the
             NOL5A gene for nucleolar protein 5A (56kDa with KKE/D
             repeat), the TMC2 gene for transmembrane cochlear
             expressed protein 2, a novel gene, the RNU56 gene for
             small nuclear RNA U56, the RNU57 gene for small nuclear
             RNA U57, the 5' end of one variant of the ZNF343 gene for
             zinc finger protein 343 and three CpG islands, complete
             sequence
          Length = 159272

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ttcagaatatcatacaaata 369
             ||||||||||||||||||||
Sbjct: 86907 ttcagaatatcatacaaata 86888
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
             complete sequence
          Length = 129037

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   aattataatgcaaatgattt 430
             ||||||||||||||||||||
Sbjct: 12934 aattataatgcaaatgattt 12915
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>emb|CR628365.6| Zebrafish DNA sequence from clone CH211-137O16 in linkage group 11,
             complete sequence
          Length = 191036

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   aaataaacacaattttgcca 384
             ||||||||||||||||||||
Sbjct: 46104 aaataaacacaattttgcca 46123
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>emb|CR628392.7| Zebrafish DNA sequence from clone CH211-209N13 in linkage group 5,
             complete sequence
          Length = 147269

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 460   tcaatggattagtaaatgaataaa 483
             ||||||||||| ||||||||||||
Sbjct: 85710 tcaatggattaataaatgaataaa 85733
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>emb|BX120000.8| Zebrafish DNA sequence from clone CH211-214C13 in linkage group 17,
             complete sequence
          Length = 214728

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   taaattatcttacattaaga 243
             ||||||||||||||||||||
Sbjct: 77822 taaattatcttacattaaga 77841
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 411      aattataatgcaaatgattt 430
                ||||||||||||||||||||
Sbjct: 30537223 aattataatgcaaatgattt 30537204
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 411     aattataatgcaaatgattt 430
               ||||||||||||||||||||
Sbjct: 4279037 aattataatgcaaatgattt 4279018
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 411     aattataatgcaaatgattt 430
               ||||||||||||||||||||
Sbjct: 3866014 aattataatgcaaatgattt 3866033
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>gb|AC112235.4| Homo sapiens BAC clone RP11-285D1 from 2, complete sequence
          Length = 30304

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  ttgtgaataataatatgaac 317
            ||||||||||||||||||||
Sbjct: 9325 ttgtgaataataatatgaac 9344
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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0089K24
          Length = 154137

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    aattataatgcaaatgattt 430
              ||||||||||||||||||||
Sbjct: 139556 aattataatgcaaatgattt 139575
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>emb|BX255905.4| Zebrafish DNA sequence from clone DKEY-11B8 in linkage group 20,
             complete sequence
          Length = 118677

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   ataaacacaattttgccaac 386
             ||||||||||||||||||||
Sbjct: 87275 ataaacacaattttgccaac 87256
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>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20,
              complete sequence
          Length = 176463

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    ataaacacaattttgccaac 386
              ||||||||||||||||||||
Sbjct: 175694 ataaacacaattttgccaac 175713
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>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17,
             complete sequence
          Length = 237313

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   taaattatcttacattaaga 243
             ||||||||||||||||||||
Sbjct: 68326 taaattatcttacattaaga 68307
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>tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete interleukin-1 gene cluster (Draft
             Contig) including IL1A (IL1F1), IL1B (IL1F2), IL1RN
             (IL1F3), IL1F5, IL1F6, IL1F7, IL1F8, IL1F9, IL1F10
          Length = 495475

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   ttgtgaataataatatgaac 317
             ||||||||||||||||||||
Sbjct: 57338 ttgtgaataataatatgaac 57357
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>emb|CT033785.8| Mouse DNA sequence from clone RP23-445G17 on chromosome 13, complete
             sequence
          Length = 181922

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     caacttcacaaatgcatttgccatgttt 28
             |||||| ||||| |||||||||||||||
Sbjct: 58434 caactttacaaaagcatttgccatgttt 58461
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>emb|AL929267.14| Zebrafish DNA sequence from clone CH211-2M15 in linkage group 14,
            complete sequence
          Length = 175892

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  ataatgcaaatgattttgtt 434
            ||||||||||||||||||||
Sbjct: 7734 ataatgcaaatgattttgtt 7715
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>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence
          Length = 154142

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   agctgttcaagctacataaa 227
             ||||||||||||||||||||
Sbjct: 26974 agctgttcaagctacataaa 26955
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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15,
              complete sequence
          Length = 134307

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    aattataatgcaaatgattt 430
              ||||||||||||||||||||
Sbjct: 107537 aattataatgcaaatgattt 107518
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>emb|AJ001752.1|VFGLB3 Vicia faba L. Kleine Thueringer
          Length = 3973

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 taaattatcttacattaaga 243
           ||||||||||||||||||||
Sbjct: 827 taaattatcttacattaaga 846


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,811,874
Number of Sequences: 3902068
Number of extensions: 5811874
Number of successful extensions: 118028
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117822
Number of HSP's gapped (non-prelim): 206
length of query: 520
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 497
effective length of database: 17,143,297,704
effective search space: 8520218958888
effective search space used: 8520218958888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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