ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_184331.2| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
3dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
4dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8gb|AY107101.1| Zea mays PCO079267 mRNA sequence 88 4e-14
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
10dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
11dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
12gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, com... 40 7.7
13gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL0... 40 7.7
14gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete... 40 7.7
15emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chr... 40 7.7
16gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 7.7
17emb|AL157819.15| Human DNA sequence from clone RP11-480G1 on chr... 40 7.7
18emb|AL109921.21|HSDJ383J4 Human DNA sequence from clone RP3-383J... 40 7.7
19emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and l... 40 7.7
20tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (... 40 7.7
21gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, co... 40 7.7
22gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, com... 40 7.7
23gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, c... 40 7.7
24gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 7.7
25emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chr... 40 7.7 
>ref|NM_184331.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1043

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                       
Query: 247 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 834 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 775

                                                                       
Query: 307 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 774 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 715

                                                                  
Query: 367 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctc 421
           ||||||| ||    || |||||||||||||||||||||||  | |||||||||||
Sbjct: 714 tctgcacattcaccggtagctcggtgaattcagggccctcgtaagggaatttctc 660



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 452 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 626 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 567

                                   
Query: 512 agatcccttggagactatcacctt 535
           ||| |||||||||||| |||||||
Sbjct: 566 agagcccttggagactgtcacctt 543
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>dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C02, full
           insert sequence
          Length = 1102

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                       
Query: 247 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 862 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 803

                                                                       
Query: 307 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 802 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 743

                                                                  
Query: 367 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctc 421
           ||||||| ||    || |||||||||||||||||||||||  | |||||||||||
Sbjct: 742 tctgcacattcaccggtagctcggtgaattcagggccctcgtaagggaatttctc 688



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 452 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 654 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 595

                                   
Query: 512 agatcccttggagactatcacctt 535
           ||| |||||||||||| |||||||
Sbjct: 594 agagcccttggagactgtcacctt 571
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>dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A12, full
           insert sequence
          Length = 1043

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                       
Query: 247 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 834 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 775

                                                                       
Query: 307 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 774 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 715

                                                                  
Query: 367 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctc 421
           ||||||| ||    || |||||||||||||||||||||||  | |||||||||||
Sbjct: 714 tctgcacattcaccggtagctcggtgaattcagggccctcgtaagggaatttctc 660



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 452 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 626 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 567

                                   
Query: 512 agatcccttggagactatcacctt 535
           ||| |||||||||||| |||||||
Sbjct: 566 agagcccttggagactgtcacctt 543
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>dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K21, full
           insert sequence
          Length = 1172

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/160 (85%)
 Strand = Plus / Minus

                                                                       
Query: 247 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 863 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 804

                                                                       
Query: 307 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 803 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 744

                                                   
Query: 367 tctgcacgttgggaggaagctcggtgaattcagggccctc 406
           ||||||| ||    || |||||||||||||||||||||||
Sbjct: 743 tctgcacattcaccggtagctcggtgaattcagggccctc 704



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 452 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 655 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 596

                                   
Query: 512 agatcccttggagactatcacctt 535
           ||| |||||||||||| |||||||
Sbjct: 595 agagcccttggagactgtcacctt 572
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                           
Query: 452     catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
               ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 2374081 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 2374140

                                       
Query: 512     agatcccttggagactatcacctt 535
               ||| |||||||||||| |||||||
Sbjct: 2374141 agagcccttggagactgtcacctt 2374164



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                           
Query: 247     ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
               |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 2373781 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 2373840

                                                                           
Query: 307     gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
               ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 2373841 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 2373900

                      
Query: 367     tctgcac 373
               |||||||
Sbjct: 2373901 tctgcac 2373907



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 390     gtgaattcagggccctcaaaggggaatttctc 421
               |||||||||||||||||  | |||||||||||
Sbjct: 2374016 gtgaattcagggccctcgtaagggaatttctc 2374047
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                          
Query: 452    catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
              ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 103131 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 103190

                                      
Query: 512    agatcccttggagactatcacctt 535
              ||| |||||||||||| |||||||
Sbjct: 103191 agagcccttggagactgtcacctt 103214



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                          
Query: 247    ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
              |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 102831 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 102890

                                                                          
Query: 307    gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
              ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 102891 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 102950

                     
Query: 367    tctgcac 373
              |||||||
Sbjct: 102951 tctgcac 102957



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 390    gtgaattcagggccctcaaaggggaatttctc 421
              |||||||||||||||||  | |||||||||||
Sbjct: 103066 gtgaattcagggccctcgtaagggaatttctc 103097
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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0019D06
          Length = 167405

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                          
Query: 452    catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 511
              ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 157665 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 157724

                                      
Query: 512    agatcccttggagactatcacctt 535
              ||| |||||||||||| |||||||
Sbjct: 157725 agagcccttggagactgtcacctt 157748



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                          
Query: 247    ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
              |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 157365 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 157424

                                                                          
Query: 307    gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
              ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 157425 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 157484

                     
Query: 367    tctgcac 373
              |||||||
Sbjct: 157485 tctgcac 157491



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 390    gtgaattcagggccctcaaaggggaatttctc 421
              |||||||||||||||||  | |||||||||||
Sbjct: 157600 gtgaattcagggccctcgtaagggaatttctc 157631
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>gb|AY107101.1| Zea mays PCO079267 mRNA sequence
          Length = 1088

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 247 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 306
           |||| ||||| ||||||||||||| ||||||||  | |||||| || | |||||||||||
Sbjct: 875 ccttcagcttagtcatccaccggatgtactcctgagcctgcttagtcaccatgtaatcgt 816

                                                                       
Query: 307 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 366
           ||||  ||||||| |  | |||||| || |||| |  ||||||| ||||||||||||| |
Sbjct: 815 gcatatagttggtagccgacagcgttacccctctttgctccaggtacttgaacaggcctt 756

                                                                   
Query: 367 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctct 422
           |||| || ||   ||| ||||||||||| || ||||||||  ||||||| ||||||
Sbjct: 755 tctgaacattcacagggagctcggtgaactcggggccctcgtaggggaacttctct 700



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 432 tctgttttctctgctatcatcatgtcgtcaatggtgatctcctcacgaaaggctgtgcag 491
           |||||||||||  |||||| ||| || || |||||||||||||| || ||||||||||| 
Sbjct: 684 tctgttttctcaactatcagcatatcatcgatggtgatctcctcgcggaaggctgtgcat 625

                                                       
Query: 492 gtgaactcaaggtttgggccagatcccttggagactatcacctt 535
           |||||||| || |||||||||||  | ||||| |||| ||||||
Sbjct: 624 gtgaactcgagctttgggccagagtctttggaaactaccacctt 581
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 431      ttctgttttctctgctatcat 451
                |||||||||||||||||||||
Sbjct: 29340991 ttctgttttctctgctatcat 29341011
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0597G07
          Length = 152928

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 431    ttctgttttctctgctatcat 451
              |||||||||||||||||||||
Sbjct: 129680 ttctgttttctctgctatcat 129700
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0034A04
          Length = 151263

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 431  ttctgttttctctgctatcat 451
            |||||||||||||||||||||
Sbjct: 3913 ttctgttttctctgctatcat 3933
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>gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, complete sequence
          Length = 167235

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 432   tctgttttctctgctatcatcatg 455
             ||||||||||||||| ||||||||
Sbjct: 46690 tctgttttctctgctgtcatcatg 46713
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>gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL042C gene, complete
           cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  agctgctgatacaggactac 111
           ||||||||||||||||||||
Sbjct: 125 agctgctgatacaggactac 144
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>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    ggtgatcatgtaatcgtgca 309
              ||||||||||||||||||||
Sbjct: 111686 ggtgatcatgtaatcgtgca 111667
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>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat
              shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a
              novel gene and a ribosomal protein L21 (RPL21) pseudogene,
              complete sequence
          Length = 197634

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    gaccaaacccttgagcttgg 258
              ||||||||||||||||||||
Sbjct: 147417 gaccaaacccttgagcttgg 147398
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 356     gaacaggcccttctgcacgt 375
               ||||||||||||||||||||
Sbjct: 1465186 gaacaggcccttctgcacgt 1465167
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>emb|AL157819.15| Human DNA sequence from clone RP11-480G1 on chromosome 13q13.1-14.3
             Contains a novel gene, complete sequence
          Length = 110911

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   ttcagggccctcaaagggga 414
             ||||||||||||||||||||
Sbjct: 20828 ttcagggccctcaaagggga 20809
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>emb|AL109921.21|HSDJ383J4 Human DNA sequence from clone RP3-383J4 on chromosome 1q24.1-24.3
             Contains two genes for novel proteins (FLJ10514) and two
             CpG islands, complete sequence
          Length = 133936

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   ctctgcatcaggttctgttt 438
             ||||||||||||||||||||
Sbjct: 80204 ctctgcatcaggttctgttt 80223
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>emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and lambda 6569
          Length = 33954

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    agctgctgatacaggactac 111
             ||||||||||||||||||||
Sbjct: 11259 agctgctgatacaggactac 11240
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>tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (HDC19000) gene,
           complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 ggtgatcatgtaatcgtgca 309
           ||||||||||||||||||||
Sbjct: 327 ggtgatcatgtaatcgtgca 346
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>gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, complete sequence
          Length = 132735

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   aaaggggaatttctctgcat 426
             ||||||||||||||||||||
Sbjct: 31491 aaaggggaatttctctgcat 31510
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>gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, complete sequence
          Length = 136843

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    aaaggggaatttctctgcat 426
              ||||||||||||||||||||
Sbjct: 109404 aaaggggaatttctctgcat 109423
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>gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, complete sequence
          Length = 43735

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 424  catcaggttctgttttctct 443
            ||||||||||||||||||||
Sbjct: 8719 catcaggttctgttttctct 8738
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    ggtgatcatgtaatcgtgca 309
              ||||||||||||||||||||
Sbjct: 204055 ggtgatcatgtaatcgtgca 204074
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>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete
             sequence
          Length = 189040

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   ctctgcatcaggttctgttt 438
             ||||||||||||||||||||
Sbjct: 63032 ctctgcatcaggttctgttt 63051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,884,065
Number of Sequences: 3902068
Number of extensions: 3884065
Number of successful extensions: 73044
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72933
Number of HSP's gapped (non-prelim): 99
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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