>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 592 DHTMPRGQQSLVTWATPRLTEDT-VKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFR 416
           D   P G+ +LV WA P LT    + + +DPRL+G+               C+  +++ R
Sbjct: 281 DKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSR 340

Query: 415 PSMSIVVK 392
           P+M+ +VK
Sbjct: 341 PTMNEIVK 348

>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast|
           precursor (EC 2.7.11.1)
          Length = 419

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -3

Query: 580 PRGQQSLVTWATPRLT-EDTVKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFRPSMS 404
           PRGQ+SLV W  P L+ +  VKQ +D  +KG+               C++ + + RP M 
Sbjct: 300 PRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMK 359

Query: 403 IVVK 392
            VV+
Sbjct: 360 EVVE 363

>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)|
           (AvrPphB susceptible protein 1)
          Length = 456

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -3

Query: 592 DHTMPRGQQSLVTWATPRLTEDTVK--QCIDPRLKGECXXXXXXXXXXXXXLCVQYESEF 419
           D  MP G+Q+LV WA P L  D  K  +  DPRLKG               +C+Q ++  
Sbjct: 291 DSEMPHGEQNLVAWARP-LFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAAT 349

Query: 418 RPSMSIVV 395
           RP ++ VV
Sbjct: 350 RPLIADVV 357

>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)|
          Length = 924

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 580 PRGQQSLVTWATPRLTEDTVKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFRPSMSI 401
           PR + SLV WA P +    V + +DP +KG                C++  S +RP M  
Sbjct: 803 PRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVD 862

Query: 400 VVK 392
           +V+
Sbjct: 863 IVR 865

>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does|
           not make infections protein 2) (Symbiosis receptor-like
           kinase) (MtSYMRK)
          Length = 925

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -3

Query: 580 PRGQQSLVTWATPRLTEDTVKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFRPSMSI 401
           PR + SLV WA P +    V + +DP +KG                C++  S +RP M  
Sbjct: 804 PRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVD 863

Query: 400 VVK 392
           +V+
Sbjct: 864 IVR 866

>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)|
          Length = 412

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -3

Query: 592 DHTMPRGQQSLVTWATPRL-TEDTVKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFR 416
           D   P G+Q LV WA P L  +  + + ID RL+ +               C+ +E + R
Sbjct: 282 DKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLR 341

Query: 415 PSMSIVV 395
           P+M+ VV
Sbjct: 342 PNMNEVV 348

>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)|
          Length = 410

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -3

Query: 592 DHTMPRGQQSLVTWATPRL-TEDTVKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFR 416
           D   P G+++LV WA P L  +  + + ID RL+ +               C+  E + R
Sbjct: 281 DKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLR 340

Query: 415 PSMSIVV 395
           P+MS VV
Sbjct: 341 PNMSEVV 347

>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC|
           2.7.11.1)
          Length = 423

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 592 DHTMPRGQQSLVTWATPRLTED-TVKQCIDPRLKGECXXXXXXXXXXXXXLCVQYESEFR 416
           D+T  R  Q+LV WA P   +     + +DP L+G+              +CVQ +   R
Sbjct: 308 DNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMR 367

Query: 415 PSMSIVV 395
           P +S VV
Sbjct: 368 PVVSDVV 374

>ASPD3_BORBR (Q7WE57) Probable L-aspartate dehydrogenase 3 (EC 1.4.1.21)|
          Length = 272

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
 Frame = +2

Query: 23  QINGCRLKITTANPETSSHGPTTTFPSSHVTAYPYIP----PRTQLIKVTANKCSKSASL 190
           ++ GCRL   +        G T  F +S     P +P    PR   I V   +C+ +A L
Sbjct: 29  EVAGCRLSAVSGRDP----GRTADFIASLPRPVPAVPLHELPRHADIVV---ECAPAAVL 81

Query: 191 GGITRPVLELSKATVVLSV 247
             I  PVL+  K  +VLSV
Sbjct: 82  PQIVEPVLDAGKKVIVLSV 100

>DPOA_YEAST (P13382) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA|
           polymerase I)
          Length = 1468

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 58  KPRNIKPRTNYNLPKFPCYSISIYTTQN 141
           KP+NI P T   +P   C S+SI T  N
Sbjct: 521 KPQNITPTTTKTMPNLRCLSLSIQTLMN 548

>IAPP_RAT (P12969) Islet amyloid polypeptide precursor (Diabetes-associated|
           peptide) (DAP) (Amylin)
          Length = 93

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 327 LQTPDLPSSTNKDVKKRECQDTCCSVFTESTTVALLSSRTGRVIPPSD 184
           L+   + S TN  V KR+C    C+    +  +   S+  G V+PP++
Sbjct: 21  LRATPVGSGTNPQVDKRKCNTATCATQRLANFLVRSSNNLGPVLPPTN 68

>RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated|
           guanine nucleotide exchange factor I) (cAMP-GEFI)
           (Exchange factor directly activated by cAMP 1) (Epac 1)
          Length = 876

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 41  LKITTANPETSSHGPTTTFPSSHVTAYPYIPPRTQL 148
           L +    P++S+H PT TF S  +  +    P TQL
Sbjct: 357 LLLEAMRPDSSAHDPTETFLSDFLLTHSVFMPSTQL 392

>KNIR_DROVI (Q24753) Zygotic gap protein knirps|
          Length = 481

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 45  KSQRQTQKHQATDQLQPSQVPMLQHIHIYHPEHSLLR*PPTNAARA 182
           + Q+Q  +HQ   Q  P   P+L +   + PEH   R P   AA A
Sbjct: 135 QQQQQQHQHQQQQQRHPHLPPLLGYTGYHLPEHFGARHPADAAAAA 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,162,950
Number of Sequences: 219361
Number of extensions: 1720310
Number of successful extensions: 5631
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5618
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)