ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15j11 |
|---|---|
| Clone Library Name | barley_pub |
>UCHL1_RAT (Q00981) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 76 ISSXHDXXXXXXREGQCRRSSYLCVNLLLSNEVDGYVGGKEGR 204 I + HD +EGQCR + + +L N VDG++ +GR Sbjct: 139 IQAAHDSVA---QEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
>UCHL1_PIG (Q6SEG5) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 76 ISSXHDXXXXXXREGQCRRSSYLCVNLLLSNEVDGYVGGKEGR 204 I + HD +EGQCR + + +L N VDG++ +GR Sbjct: 139 IQAAHDAVA---QEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
>UCHL1_MOUSE (Q9R0P9) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 76 ISSXHDXXXXXXREGQCRRSSYLCVNLLLSNEVDGYVGGKEGR 204 I + HD +EGQCR + + +L N VDG++ +GR Sbjct: 139 IQAAHDSVA---QEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
>UCHL1_MACFA (Q60HC8) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 76 ISSXHDXXXXXXREGQCRRSSYLCVNLLLSNEVDGYVGGKEGR 204 I + HD +EGQCR + + +L N VDG++ +GR Sbjct: 139 IQAAHDAVA---QEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
>UCHL1_HUMAN (P09936) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 76 ISSXHDXXXXXXREGQCRRSSYLCVNLLLSNEVDGYVGGKEGR 204 I + HD +EGQCR + + +L N VDG++ +GR Sbjct: 139 IQAAHDAVA---QEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
>UCHL1_HORSE (Q9GM50) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 76 ISSXHDXXXXXXREGQCRRSSYLCVNLLLSNEVDGYVGGKEGR 204 I + HD +EGQCR + + +L N VDG++ +GR Sbjct: 139 IQAAHDAVA---QEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,049,849 Number of Sequences: 219361 Number of extensions: 251213 Number of successful extensions: 441 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 441 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
