ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15j07 |
|---|---|
| Clone Library Name | barley_pub |
>CBP21_HORVU (P55747) Serine carboxypeptidase II-1 precursor (EC 3.4.16.6)| (CP-MII.1) [Contains: Serine carboxypeptidase II-1 chain A; Serine carboxypeptidase II-1 chain B] (Fragment) Length = 324 Score = 80.1 bits (196), Expect = 7e-15 Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 1/201 (0%) Frame = -3 Query: 705 YVFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFL 526 Y FL+NW +RFPQYK G+S Sbjct: 17 YAFLVNWLERFPQYKYRDFYIA---------------------GES-------------Y 42 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 +GHYVPQLS+ + NK G ++ +NFKG MV Sbjct: 43 AGHYVPQLSQLVHRNNK-GVRKPILNFKGFMV---------------------------- 73 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHCDF-AMDNTTAACEQALEDY 169 GNA++DD D G +Y W H +ISD Y ++ C+F + ++ + AC + Sbjct: 74 -----GNAVIDDYHDFVGTFEYWWTHGLISDDTYQKLQLACEFDSAEHESEACNKINNVA 128 Query: 168 FAVYRLIDMYSLYTPVCTDSS 106 A LID YS+YTP C +S Sbjct: 129 EAEEGLIDAYSIYTPTCKKTS 149
>BRS1_ARATH (Q9M099) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (Bri1 suppressor 1) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain Length = 465 Score = 77.8 bits (190), Expect = 3e-14 Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 2/197 (1%) Frame = -3 Query: 702 VFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFLS 523 +FL+ W RFPQYK G+S + Sbjct: 158 IFLIKWLSRFPQYKYRDFYIA---------------------GES-------------YA 183 Query: 522 GHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXXX 343 GHYVPQL++KI D NK K IN KG +V Sbjct: 184 GHYVPQLAKKINDYNKAFSKPI-INLKGFLV----------------------------- 213 Query: 342 XMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHCDFAMDNTTAACEQALEDYFA 163 GNA+ D++ D G V Y W HA+ISD+ Y + +C+F ++ + C+ A+ +Y Sbjct: 214 ----GNAVTDNQYDSIGTVTYWWTHAIISDKSYKSILKYCNFTVERVSDDCDNAV-NYAM 268 Query: 162 VYRL--IDMYSLYTPVC 118 + ID YS+YTP C Sbjct: 269 NHEFGDIDQYSIYTPTC 285
>CBP2_HORVU (P08818) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine Length = 476 Score = 74.3 bits (181), Expect = 4e-13 Identities = 62/211 (29%), Positives = 83/211 (39%), Gaps = 3/211 (1%) Frame = -3 Query: 705 YVFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFL 526 Y FL WF+RFP YK G+S Sbjct: 166 YAFLAAWFERFPHYKYREFYVA---------------------GES-------------Y 191 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 +GHYVP+LS+ + H IN KG MV Sbjct: 192 AGHYVPELSQLV-----HRSGNPVINLKGFMV---------------------------- 218 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHC-DFAMDNTTAACEQALEDY 169 GN L+DD D G ++ W+H ++SD Y +K C + + + AC+ A + Sbjct: 219 -----GNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKDACLHDSFIHPSPACDAATDVA 273 Query: 168 FAVYRLIDMYSLYTPVC--TDSSSSSPLAKR 82 A IDMYSLYTPVC + SSSSS L++R Sbjct: 274 TAEQGNIDMYSLYTPVCNISSSSSSSSLSRR 304
>CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine Length = 423 Score = 73.6 bits (179), Expect = 6e-13 Identities = 58/203 (28%), Positives = 78/203 (38%), Gaps = 1/203 (0%) Frame = -3 Query: 705 YVFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFL 526 Y FL WF+RFP YK G+S Sbjct: 134 YAFLAKWFERFPHYKYRDFYIA---------------------GES-------------Y 159 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 +GHYVP+LS+ + H K IN KG MV Sbjct: 160 AGHYVPELSQLV-----HRSKNPVINLKGFMV---------------------------- 186 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHC-DFAMDNTTAACEQALEDY 169 GN L+DD D G ++ W+H ++SD Y +K C + + + AC+ A + Sbjct: 187 -----GNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVA 241 Query: 168 FAVYRLIDMYSLYTPVCTDSSSS 100 A IDMYSLYTPVC +SS+ Sbjct: 242 TAEQGNIDMYSLYTPVCNITSST 264
>CBP22_HORVU (P55748) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6)| (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) Length = 436 Score = 68.9 bits (167), Expect = 2e-11 Identities = 63/236 (26%), Positives = 89/236 (37%), Gaps = 3/236 (1%) Frame = -3 Query: 702 VFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFLS 523 VFL W +RFPQYK G+S + Sbjct: 126 VFLTKWLERFPQYKEREFYLT---------------------GES-------------YA 151 Query: 522 GHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXXX 343 GHYVPQL++ I + + IN KG MV Sbjct: 152 GHYVPQLAQAI-KRHHEATGDKSINLKGYMV----------------------------- 181 Query: 342 XMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHCDF-AMDNTTAACEQALEDYF 166 GNAL DD D G+ QY W +ISD+ Y + CDF + +T+ C++ L+ Sbjct: 182 ----GNALTDDFHDHYGIFQYMWTTGLISDQTYKLLNIFCDFESFVHTSPQCDKILDIAS 237 Query: 165 AVYRLIDMYSLYTPVCTDS--SSSSPLAKRVGVHGAAPKIFSKYVTSXSIDHHRLN 4 ID YS++TP C S SS + + KR+ G + + SI + L+ Sbjct: 238 TEAGNIDSYSIFTPTCHSSFASSRNKVVKRLRSVGKMGEQYDPCTEKHSIVYFNLH 293
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 63.9 bits (154), Expect = 5e-10 Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 4/208 (1%) Frame = -3 Query: 705 YVFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFL 526 Y FL NW +RFP+YK G+S Sbjct: 212 YQFLDNWLERFPEYKGREFYIT---------------------GES-------------Y 237 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 +GHYVPQL+ I +H + IN KG+M+ Sbjct: 238 AGHYVPQLAHAIL---RHASPD--INLKGIMI---------------------------- 264 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHCDF----AMDNTTAACEQAL 178 GNA+++D TD GM + W HA+ISD + +C+F A + A C+ A Sbjct: 265 -----GNAVINDWTDSKGMYDFFWTHALISDETADGISKNCNFTAYGAGVASNALCDAAS 319 Query: 177 EDYFAVYRLIDMYSLYTPVCTDSSSSSP 94 ++ ID+Y++Y P C +P Sbjct: 320 DEVGESLADIDIYNIYAPNCQSEKLVTP 347
>HNLS_SORBI (P52708) P-(S)-hydroxymandelonitrile lyase precursor (EC 4.1.2.11)| (Hydroxynitrile lyase) (HNL) [Contains: P-(S)-hydroxymandelonitrile lyase chain A; P-(S)-hydroxymandelonitrile lyase chain B] (Fragment) Length = 366 Score = 52.0 bits (123), Expect = 2e-06 Identities = 50/217 (23%), Positives = 73/217 (33%), Gaps = 2/217 (0%) Frame = -3 Query: 705 YVFLLNWFKRFPQYKXXXXXXXXXXXXXXXXXXXXSISTLLQFGQSTQLKLDTDGWRTFL 526 Y FL+ WF+RFP Y Sbjct: 45 YTFLVKWFERFPHYNYREFYIAGE------------------------------------ 68 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 SGH++PQLS+ ++ + P INF+GL+V++ Sbjct: 69 SGHFIPQLSQVVYRNRNNSPF---INFQGLLVSS-------------------------- 99 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVY-SDVKAHCDFAMDNTTAACEQALEDY 169 L +D D GM + W H +ISD S +K + + T C + Sbjct: 100 -------GLTNDHEDMIGMFELWWHHGLISDETRDSGLKVCPGTSFMHPTPECTEVWNKA 152 Query: 168 FAVYRLIDMYSLYTPVCTDSSSSSPLAKRV-GVHGAA 61 A I+ Y++YTP C SP +R HG A Sbjct: 153 LAEQGNINPYTIYTPTC--DREPSPYQRRFWAPHGRA 187
>CBP1_ORYSA (P37890) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine| carboxypeptidase I) (Carboxypeptidase C) Length = 510 Score = 42.7 bits (99), Expect = 0.001 Identities = 46/177 (25%), Positives = 64/177 (36%), Gaps = 22/177 (12%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 +G YVP LS ++ G G K INFKG MV Sbjct: 196 AGVYVPTLSHEVVKGLHDGVKPT-INFKGYMV---------------------------- 226 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHCDFAMDNTTA-ACEQALEDY 169 GN + D D +V +A A+ISD +Y + + C NTT CE AL Sbjct: 227 -----GNGVCDTVFDGNALVPFAHGMALISDDIYQEAQTACHGNYWNTTTDKCENALYKV 281 Query: 168 FAVYRLIDMYSLYTPVCTDS---------------------SSSSPLAKRVGVHGAA 61 +++Y + P C S +++ PLA R +HG A Sbjct: 282 DTSINDLNIYDILEP-CYHSKTIKKVTPANTKLPKSFQHLGTTTKPLAVRTRMHGRA 337
>CBP1_HORVU (P07519) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine| carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine car Length = 499 Score = 38.5 bits (88), Expect = 0.022 Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 1/142 (0%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVANY*PRHRRNVIXXXXXXXXXXXXXXXX 346 +G YVP LS ++ G + G K INFKG MV Sbjct: 190 AGVYVPTLSHEVVKGIQGGAKPT-INFKGYMV---------------------------- 220 Query: 345 XXMQVGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAHCDFAMDNTT-AACEQALEDY 169 GN + D D +V +A +ISD +Y C N T C+ A+ Sbjct: 221 -----GNGVCDTIFDGNALVPFAHGMGLISDEIYQQASTSCHGNYWNATDGKCDTAISKI 275 Query: 168 FAVYRLIDMYSLYTPVCTDSSS 103 ++ +++Y + P C S S Sbjct: 276 ESLISGLNIYDILEP-CYHSRS 296
>CBPX_ORYSA (P52712) Serine carboxypeptidase-like precursor (EC 3.4.16.-)| Length = 429 Score = 31.6 bits (70), Expect(2) = 0.066 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+P + +++ GNK+ + IN KG + N Sbjct: 150 AGHYIPAFASRVYKGNKNS-EGIHINLKGFAIGN 182 Score = 24.3 bits (51), Expect(2) = 0.066 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = -1 Query: 650 FYIAGESYAGY 618 FYI GESYAG+ Sbjct: 142 FYITGESYAGH 152
>PPGB_HUMAN (P10619) Lysosomal protective protein precursor (EC 3.4.16.5)| (Cathepsin A) (Carboxypeptidase C) (Protective protein for beta-galactosidase) [Contains: Lysosomal protective protein 32 kDa chain; Lysosomal protective protein 20 kDa chain] Length = 480 Score = 35.4 bits (80), Expect = 0.19 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 8/78 (10%) Frame = -3 Query: 333 VGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAH------CDFAMDNTTAACEQALED 172 VGN L E + +V +A+ H ++ +R++S ++ H C+F DN C L++ Sbjct: 204 VGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNF-YDNKDLECVTNLQE 262 Query: 171 YFAVY--RLIDMYSLYTP 124 + +++Y+LY P Sbjct: 263 VARIVGNSGLNIYNLYAP 280
>CBP3_HORVU (P21529) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine| carboxypeptidase III) (CP-MIII) Length = 508 Score = 30.8 bits (68), Expect(2) = 0.30 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+P + ++ GNK + IN KG + N Sbjct: 225 AGHYIPAFASRVHQGNKKN-EGTHINLKGFAIGN 257 Score = 22.7 bits (47), Expect(2) = 0.30 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 Query: 650 FYIAGESYAGY 618 F+I GESYAG+ Sbjct: 217 FFITGESYAGH 227
>CBP3_WHEAT (P11515) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine| carboxypeptidase III) (CP-WIII) Length = 500 Score = 30.8 bits (68), Expect(2) = 0.30 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+P + ++ GNK + IN KG + N Sbjct: 218 AGHYIPAFASRVHQGNKKN-EGTHINLKGFAIGN 250 Score = 22.7 bits (47), Expect(2) = 0.30 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 Query: 650 FYIAGESYAGY 618 F+I GESYAG+ Sbjct: 210 FFITGESYAGH 220
>CBPX_ARATH (P32826) Serine carboxypeptidase precursor (EC 3.4.16.-)| Length = 516 Score = 28.9 bits (63), Expect(2) = 0.38 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+P + ++ GNK + IN KG + N Sbjct: 231 AGHYIPAFASRVHKGNK-ANEGVHINLKGFAIGN 263 Score = 24.3 bits (51), Expect(2) = 0.38 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = -1 Query: 650 FYIAGESYAGY 618 FYI GESYAG+ Sbjct: 223 FYITGESYAGH 233
>CBP3_ORYSA (P37891) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine| carboxypeptidase III) Length = 500 Score = 29.3 bits (64), Expect(2) = 0.82 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+P + ++ GNK + IN KG + N Sbjct: 218 AGHYIPAFASRVHQGNK-ANEGIHINLKGFAIGN 250 Score = 22.7 bits (47), Expect(2) = 0.82 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 Query: 650 FYIAGESYAGY 618 F+I GESYAG+ Sbjct: 210 FFITGESYAGH 220
>PPGB_MOUSE (P16675) Lysosomal protective protein precursor (EC 3.4.16.5)| (Cathepsin A) (Carboxypeptidase C) (Protective protein for beta-galactosidase) [Contains: Lysosomal protective protein 32 kDa chain; Lysosomal protective protein 20 kDa chain] Length = 474 Score = 33.1 bits (74), Expect = 0.94 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 8/78 (10%) Frame = -3 Query: 333 VGNALMDDETDQAGMVQYAWDHAVISDRVYSDVKAH------CDFAMDNTTAACEQALED 172 VGN L E + +V +A+ H ++ +R+++ ++ H C+F DN C L + Sbjct: 199 VGNGLASYEQNDNSLVYFAYYHGLLGNRLWTSLQTHCCAQNKCNF-YDNKDPECVNNLLE 257 Query: 171 YFAVYRL--IDMYSLYTP 124 + +++Y+LY P Sbjct: 258 VSRIVGKSGLNIYNLYAP 275
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 26.2 bits (56), Expect(2) = 2.7 Identities = 11/43 (25%), Positives = 24/43 (55%), Gaps = 9/43 (20%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNK---------HGPKENRINFKGLMVAN 424 +GHY+PQ +++I + N+ + ++ IN K +++ N Sbjct: 717 AGHYIPQFAKEIMEHNQGANFFVASGYEMEKQYINLKSVLIGN 759 Score = 23.9 bits (50), Expect(2) = 2.7 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = -1 Query: 650 FYIAGESYAGY 618 F+IAGESYAG+ Sbjct: 709 FHIAGESYAGH 719
>CBPX_PEA (Q41005) Serine carboxypeptidase-like (EC 3.4.16.-) (Fragment)| Length = 286 Score = 31.2 bits (69), Expect = 3.6 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+P L+ +I GN+ + IN KGL + N Sbjct: 6 AGHYIPALASRIHQGNQ-ANEGIHINLKGLAIGN 38
>YBY9_YEAST (P38109) Putative serine carboxypeptidase in ESR1-IRA1 intergenic| region (EC 3.4.16.-) Length = 508 Score = 25.0 bits (53), Expect(2) = 6.0 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -3 Query: 525 SGHYVPQLSEKIFDGNKHGPKENRINFKGLMVAN 424 +GHY+PQ++ +I N E N +M+ N Sbjct: 221 AGHYIPQIAHEIVVKN----PERTFNLTSVMIGN 250 Score = 23.9 bits (50), Expect(2) = 6.0 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = -1 Query: 650 FYIAGESYAGY 618 F+IAGESYAG+ Sbjct: 213 FHIAGESYAGH 223
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 30.4 bits (67), Expect = 6.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 487 RRQQARAQGEPHQLQGSHGSQLLTTAS 407 ++QQ+++ PHQLQ H Q LT AS Sbjct: 199 QQQQSQSSTHPHQLQSQHMQQALTQAS 225
>CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5)| (Carboxypeptidase YSCY) Length = 523 Score = 27.3 bits (59), Expect(2) = 7.7 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = -1 Query: 650 FYIAGESYAGYVSVVDAAFQRSCSSVRARN*NLT 549 F+IAGESYAG+ V F S + RN NLT Sbjct: 243 FHIAGESYAGHYIPV---FADEILSQKNRNFNLT 273 Score = 21.2 bits (43), Expect(2) = 7.7 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = -3 Query: 705 YVFLLNWFKRFPQYK 661 Y FL +F+ FP+Y+ Sbjct: 225 YAFLQLFFQHFPEYQ 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,318,562 Number of Sequences: 219361 Number of extensions: 1125101 Number of successful extensions: 3389 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3381 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7819576386 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
