ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15i19 |
|---|---|
| Clone Library Name | barley_pub |
>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3| Length = 206 Score = 192 bits (487), Expect(2) = 8e-61 Identities = 92/127 (72%), Positives = 102/127 (80%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKIFWRTVRGMIPHKT RG AALARLK FEG+PPPYD+ KRMVIPDALKVLRLQ GHK Sbjct: 80 APSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVIPDALKVLRLQSGHK 139 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 YCLLG LS EVGWN++ +V Y+R+KQL KLR KAEK AEE+LGSQLD Sbjct: 140 YCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLD 199 Query: 140 ILAPIKY 120 +LAP+KY Sbjct: 200 VLAPVKY 206 Score = 61.6 bits (148), Expect(2) = 8e-61 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 RQKMKY+RFLRKRMNTKPSHGPIHFR P + F Sbjct: 54 RQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIF 85
>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4| Length = 206 Score = 189 bits (481), Expect(2) = 4e-60 Identities = 93/127 (73%), Positives = 101/127 (79%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKIFWRTVRGMIPHKT RG AALARLK +EGVP PYD+ KRMVIPDALKVLRLQ GHK Sbjct: 80 APSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHK 139 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 YCLLG LS EVGWN++ V Y+R+KQL KLRVKAEK AEEKLG+QLD Sbjct: 140 YCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLD 199 Query: 140 ILAPIKY 120 ILAP+KY Sbjct: 200 ILAPVKY 206 Score = 61.6 bits (148), Expect(2) = 4e-60 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 RQKMKY+RFLRKRMNTKPSHGPIHFR P + F Sbjct: 54 RQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIF 85
>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2| Length = 206 Score = 189 bits (481), Expect(2) = 4e-60 Identities = 93/127 (73%), Positives = 100/127 (78%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKIFWRTVRGMIPHKT RG AALARLK FEGVPPPYD+ KRMVIPDALKVLRLQ GHK Sbjct: 80 APSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHK 139 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 YCLLG LS EVGWN++ + Y+R+KQL KLR KAEK AEEKLGSQLD Sbjct: 140 YCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLD 199 Query: 140 ILAPIKY 120 +LA IKY Sbjct: 200 VLASIKY 206 Score = 61.6 bits (148), Expect(2) = 4e-60 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 RQKMKY+RFLRKRMNTKPSHGPIHFR P + F Sbjct: 54 RQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIF 85
>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1| Length = 206 Score = 186 bits (473), Expect(2) = 3e-59 Identities = 90/127 (70%), Positives = 100/127 (78%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKIFWRTVRGMIPHKT RG ALARLK FEGVP PYD+ KRMV+PDALKVLRLQ GHK Sbjct: 80 APSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHK 139 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 YCLLG LS EVGWN++ + Y+R+KQL+KLR KAEK AEEKLGSQLD Sbjct: 140 YCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLD 199 Query: 140 ILAPIKY 120 +LAP+KY Sbjct: 200 VLAPVKY 206 Score = 61.6 bits (148), Expect(2) = 3e-59 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 RQKMKY+RFLRKRMNTKPSHGPIHFR P + F Sbjct: 54 RQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIF 85
>RL13A_PICMA (O65055) 60S ribosomal protein L13a| Length = 206 Score = 176 bits (447), Expect(2) = 3e-56 Identities = 85/127 (66%), Positives = 100/127 (78%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+I WRT+RGMIPHKT RG AALA L+AFEGVPPPYDR KRMVIPDALKVLRLQPGHK Sbjct: 80 APSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRKKRMVIPDALKVLRLQPGHK 139 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 YCLLG LSKEVGW++ +VSY+RRKQLAKLR KA + AE++L +++ Sbjct: 140 YCLLGRLSKEVGWHHFDTITELEEKRKAKAQVSYERRKQLAKLRSKAVELAEKQLAPEME 199 Query: 140 ILAPIKY 120 +LA +KY Sbjct: 200 LLASLKY 206 Score = 61.6 bits (148), Expect(2) = 3e-56 Identities = 27/28 (96%), Positives = 27/28 (96%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRP 496 RQKMKYLRFLRKRMNTKPSHGPIHFR P Sbjct: 54 RQKMKYLRFLRKRMNTKPSHGPIHFRAP 81
>RL13A_LUPLU (O49885) 60S ribosomal protein L13a| Length = 205 Score = 190 bits (482), Expect = 3e-48 Identities = 90/127 (70%), Positives = 104/127 (81%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKIFWRTVRGMIPHKT RGE ALARLK +EG+PPP+D+ KR+V+PDALKVLRLQ GHK Sbjct: 79 APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQKRLVVPDALKVLRLQKGHK 138 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 YCLLG+LS EVGWNY+ +V Y+R+KQL KLRVKAE+ A+EKLGSQLD Sbjct: 139 YCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLNKLRVKAEQVAQEKLGSQLD 198 Query: 140 ILAPIKY 120 ILAP+KY Sbjct: 199 ILAPVKY 205 Score = 56.6 bits (135), Expect = 5e-08 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 6/44 (13%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIH------FRRPLENFLAHRAR 466 RQKMKYLRFLRKRMNTKPSHGPIH F R + + H+ + Sbjct: 54 RQKMKYLRFLRKRMNTKPSHGPIHCAPSKIFWRTVRGMIPHKTK 97
>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a| Length = 202 Score = 142 bits (357), Expect(2) = 3e-42 Identities = 66/122 (54%), Positives = 86/122 (70%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK F+G+PPPYD+ KRMV+P ALKV+RL+P K Sbjct: 74 APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LG L+ EVGW Y K+ Y ++KQL +LR +AEK E+K+G + Sbjct: 134 FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKIGKFTE 193 Query: 140 IL 135 +L Sbjct: 194 VL 195 Score = 49.7 bits (117), Expect(2) = 3e-42 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 48 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 79
>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a| Length = 202 Score = 140 bits (353), Expect(2) = 8e-42 Identities = 65/122 (53%), Positives = 85/122 (69%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK F+G+PPPYD+ KRMV+P ALKV+RL+P K Sbjct: 74 APSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LG L+ EVGW Y K+ Y ++KQL +LR +AEK E+K+ + Sbjct: 134 FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLVRLRKQAEKNVEKKIDKYTE 193 Query: 140 IL 135 +L Sbjct: 194 VL 195 Score = 49.7 bits (117), Expect(2) = 8e-42 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 48 RNKLKYLAFLRKRMNTSPSRGPYHFRAPSRIF 79
>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)| Length = 202 Score = 140 bits (352), Expect(2) = 1e-41 Identities = 65/122 (53%), Positives = 85/122 (69%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK F+G+PPPYD+ KRMV+P ALKV+RL+P K Sbjct: 74 APSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LG L+ EVGW Y K+ Y ++KQL +LR +AEK E+K+ + Sbjct: 134 FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTE 193 Query: 140 IL 135 +L Sbjct: 194 VL 195 Score = 49.7 bits (117), Expect(2) = 1e-41 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 48 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 79
>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a| Length = 202 Score = 139 bits (350), Expect(2) = 2e-41 Identities = 65/122 (53%), Positives = 84/122 (68%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK F+G+PPPYD+ KRMV+P ALKV+RL+P K Sbjct: 74 APSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LG L+ EVGW Y K+ Y ++KQL +LR +AEK E+K+ Sbjct: 134 FAYLGRLAHEVGWKYQAVTTTLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTQ 193 Query: 140 IL 135 +L Sbjct: 194 VL 195 Score = 49.7 bits (117), Expect(2) = 2e-41 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 48 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 79
>RL13A_RAT (P35427) 60S ribosomal protein L13a| Length = 202 Score = 136 bits (343), Expect(2) = 1e-40 Identities = 64/122 (52%), Positives = 84/122 (68%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK +G+PPPYD+ KRMV+P ALKV+RL+P K Sbjct: 74 APSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LG L+ EVGW Y K+ Y ++KQL +LR +AEK E+K+ + Sbjct: 134 FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLLRLRKQAEKNVEKKICKFTE 193 Query: 140 IL 135 +L Sbjct: 194 VL 195 Score = 49.7 bits (117), Expect(2) = 1e-40 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 48 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 79
>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)| (Tum-P198 antigen) Length = 202 Score = 135 bits (339), Expect(2) = 3e-40 Identities = 63/122 (51%), Positives = 84/122 (68%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK +G+PPPYD+ KRMV+P ALKV+RL+P K Sbjct: 74 APSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LG L+ EVGW Y K+ Y ++KQ+ +LR +AEK E+K+ + Sbjct: 134 FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKMHYRKKKQILRLRKQAEKNVEKKICKFTE 193 Query: 140 IL 135 +L Sbjct: 194 VL 195 Score = 49.7 bits (117), Expect(2) = 3e-40 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 48 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 79
>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198| homolog) (Fragment) Length = 189 Score = 133 bits (334), Expect(2) = 1e-39 Identities = 63/122 (51%), Positives = 80/122 (65%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK F+GVPPPYD+ KRMV+P ALK++RL+P K Sbjct: 61 APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALKIVRLKPTRK 120 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 + LLG L+ EVGW Y K+ Y ++K + KL AEK E + Sbjct: 121 FALLGRLAHEVGWKYQAITATLEEKRKEKAKIRYAKKKTVTKLSKLAEKNVESTISKYTA 180 Query: 140 IL 135 +L Sbjct: 181 VL 182 Score = 49.7 bits (117), Expect(2) = 1e-39 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 35 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 66
>RL13A_CYAPA (P93099) 60S ribosomal protein L13a| Length = 200 Score = 137 bits (346), Expect(2) = 8e-39 Identities = 65/114 (57%), Positives = 77/114 (67%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 +P++I WRT+RGMIPHKTPRG AAL RLKAFEGVPPPYD+ KRMVIP AL+VLRL+PG K Sbjct: 74 SPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEK 159 +C+LG L+ EVGW + Y R+K L LR KA A K Sbjct: 134 FCVLGRLATEVGWRHSDLVTRLEEKRKTKSAAFYARKKTLVNLRAKAAVAVASK 187 Score = 42.4 bits (98), Expect(2) = 8e-39 Identities = 17/28 (60%), Positives = 20/28 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRP 496 R K+K+ FL+KRMNT P GP HFR P Sbjct: 48 RNKLKFHAFLKKRMNTNPRRGPFHFRSP 75
>RL16_NEUCR (Q9P720) 60S ribosomal protein L16| Length = 202 Score = 130 bits (326), Expect(2) = 6e-33 Identities = 61/112 (54%), Positives = 77/112 (68%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IF++ VRGMIPHKT RG AAL RLK FEGVPPPYD+ K+MV+P AL+VLRLQPG K Sbjct: 77 APSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALRVLRLQPGRK 136 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAE 165 +C +G LS EVGW Y Y+R+K A+ +A+K+A+ Sbjct: 137 FCTVGRLSSEVGWKYEDVVSRLEERRKAKGAAYYERKKVAARQLSEAKKSAK 188 Score = 30.4 bits (67), Expect(2) = 6e-33 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSH-GPIHFRRPLENF 484 R K+KY +LRK P+ GP HFR P F Sbjct: 50 RAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIF 82
>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A| Length = 205 Score = 115 bits (288), Expect(2) = 6e-32 Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 4/116 (3%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IF++ VRGMIPHKT RG+AALARL+ F+G+P PYD+ +R+V+P A++VL L+ K Sbjct: 77 APSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRK 136 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAE----KAAE 165 YC +G LS EVGW+Y +V+ ++L KL VKA KAAE Sbjct: 137 YCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAE 192 Score = 41.6 bits (96), Expect(2) = 6e-32 Identities = 17/32 (53%), Positives = 21/32 (65%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+K+L +LRKR N P+ GP HFR P F Sbjct: 51 RNKIKFLAYLRKRCNVNPARGPFHFRAPSRIF 82
>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A| Length = 204 Score = 113 bits (282), Expect(2) = 2e-31 Identities = 49/75 (65%), Positives = 61/75 (81%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKI W+TVRGMIPHKT RG++AL RL+A++G PPPYD +R+V+P AL+V L+PG K Sbjct: 77 APSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVVVPAALRVFCLKPGRK 136 Query: 320 YCLLGELSKEVGWNY 276 YC +G LS EVGW Y Sbjct: 137 YCHVGRLSHEVGWKY 151 Score = 42.0 bits (97), Expect(2) = 2e-31 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRP 496 R K+K++ FLRKR N P+ GP HFR P Sbjct: 51 RNKLKFMSFLRKRCNVNPARGPFHFRAP 78
>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A| Length = 204 Score = 110 bits (276), Expect(2) = 1e-30 Identities = 48/75 (64%), Positives = 60/75 (80%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APSKI W+TVRGMIPHKT RG+ AL RL++++G PPPYD +R+V+P AL+V L+PG K Sbjct: 77 APSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVVVPAALRVFCLKPGRK 136 Query: 320 YCLLGELSKEVGWNY 276 YC +G LS EVGW Y Sbjct: 137 YCHVGRLSHEVGWKY 151 Score = 42.0 bits (97), Expect(2) = 1e-30 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRP 496 R K+K++ FLRKR N P+ GP HFR P Sbjct: 51 RNKLKFMSFLRKRCNVNPARGPFHFRAP 78
>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)| Length = 137 Score = 100 bits (250), Expect(2) = 6e-30 Identities = 46/67 (68%), Positives = 56/67 (83%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IFWRTVRGM+PHKT RG+AAL RLK F+G+PPPYD+ KRMV+P ALKV+RL+ K Sbjct: 71 APSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKLTGK 130 Query: 320 YCLLGEL 300 + LG L Sbjct: 131 FXYLGRL 137 Score = 49.7 bits (117), Expect(2) = 6e-30 Identities = 22/32 (68%), Positives = 23/32 (71%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL FLRKRMNT PS GP HFR P F Sbjct: 45 RNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIF 76
>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a| Length = 202 Score = 110 bits (274), Expect(2) = 2e-29 Identities = 54/127 (42%), Positives = 75/127 (59%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 AP KIFWRTVRGM+PHKT RG AL L+A+EGVP Y +TK + P A + RLQP K Sbjct: 76 APGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASR-FRLQPRRK 134 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGSQLD 141 +C++G LS EVGW + ++++K++ KL V+A+K A K+ Sbjct: 135 FCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQAKKNAAPKIAQYQK 194 Query: 140 ILAPIKY 120 I+ + Y Sbjct: 195 IIEALGY 201 Score = 38.9 bits (89), Expect(2) = 2e-29 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRP 496 R K+KY+ FLRKR N P+ G H+R P Sbjct: 50 RSKLKYMSFLRKRCNINPARGAFHYRAP 77
>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)| Length = 198 Score = 116 bits (291), Expect(2) = 2e-29 Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 1/123 (0%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IF++ +RGM+ HKT RG+AAL RLK FEG+PPPYD+ KR+V+P AL+VLRL+PG K Sbjct: 74 APSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRK 133 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAE-KAAEEKLGSQL 144 Y LG+LS VGW Y Y +++ K A AAE + QL Sbjct: 134 YTTLGKLSTSVGWKYEDVVAKLEAKRKVSSAEYYAKKRAFTKKVASANATAAESDVAKQL 193 Query: 143 DIL 135 L Sbjct: 194 AAL 196 Score = 32.3 bits (72), Expect(2) = 2e-29 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KY FLRK + GP HFR P F Sbjct: 48 RNKLKYHDFLRKATAFNKTRGPFHFRAPSRIF 79
>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)| Length = 197 Score = 114 bits (284), Expect(2) = 1e-28 Identities = 54/113 (47%), Positives = 70/113 (61%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+I ++ +RGM+ HKT RG+AAL RLK FEG+PPPYD+ KR+V+P AL+VLRL+PG K Sbjct: 73 APSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRVLRLKPGRK 132 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEE 162 Y LG+LS VGW Y Y +++ K A AA E Sbjct: 133 YTTLGKLSTSVGWKYEDVVAKLEDKRKVRSAEYYAKKRAFTKKVSSASAAASE 185 Score = 32.0 bits (71), Expect(2) = 1e-28 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRP 496 R K+KY FLRK + GP HFR P Sbjct: 47 RNKLKYHDFLRKATAFNKTRGPFHFRAP 74
>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C| Length = 197 Score = 109 bits (272), Expect(2) = 2e-28 Identities = 47/75 (62%), Positives = 59/75 (78%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IF + VRGM+PHKT RG AL L+A EG+PPP+D+ KR+V+P AL+VLRL+P K Sbjct: 76 APSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAALRVLRLKPSRK 135 Query: 320 YCLLGELSKEVGWNY 276 YC +G LS EVGW Y Sbjct: 136 YCTIGRLSSEVGWKY 150 Score = 36.2 bits (82), Expect(2) = 2e-28 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENF 484 R K+KYL +LRK PS G HFR P F Sbjct: 50 RNKLKYLAYLRKACRYNPSRGAFHFRAPSRIF 81
>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B| Length = 197 Score = 114 bits (284), Expect = 3e-25 Identities = 56/117 (47%), Positives = 77/117 (65%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IF + VRGM+PHKT RG+AAL L+A EG+PPP+D+ KR+V+P AL+VLRL+PG K Sbjct: 76 APSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRK 135 Query: 320 YCLLGELSKEVGWNYHXXXXXXXXXXXXXXKVSYDRRKQLAKLRVKAEKAAEEKLGS 150 YC +G LS EVGW Y+ +RRK + +A+ A ++K+ S Sbjct: 136 YCTVGRLSSEVGWKYNDIVAKLE-----------ERRKVKSAAFYQAKLAKQKKIAS 181 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENFLAHRARHDPAQDAPRRGCARQAEGVRGR 400 R K+KYL +LRK PS G HFR P F P + A + + V G Sbjct: 50 RNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGI 109 Query: 399 P 397 P Sbjct: 110 P 110
>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A| Length = 197 Score = 113 bits (282), Expect = 4e-25 Identities = 49/75 (65%), Positives = 62/75 (82%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 APS+IF + VRGM+PHKT RG+AAL L+A EG+PPP+D+ KR+V+P AL+VLRL+PG K Sbjct: 76 APSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRK 135 Query: 320 YCLLGELSKEVGWNY 276 YC +G LS EVGW Y Sbjct: 136 YCTVGRLSSEVGWKY 150 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = -2 Query: 579 RQKMKYLRFLRKRMNTKPSHGPIHFRRPLENFLAHRARHDPAQDAPRRGCARQAEGVRGR 400 R K+KYL +LRK PS G HFR P F P + A + + V G Sbjct: 50 RNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGI 109 Query: 399 P 397 P Sbjct: 110 P 110
>RL13_ARCFU (O29137) 50S ribosomal protein L13P| Length = 156 Score = 52.0 bits (123), Expect = 1e-06 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = -3 Query: 497 PSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKY 318 P +IF RTVRGM+P K+ RG A RL+ F GVP + I DAL + ++ KY Sbjct: 83 PERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEELQGREFEKIEDAL-LEKVSKTDKY 141 Query: 317 CLLGELSKEVGW 282 L E+S+ +G+ Sbjct: 142 VTLAEVSRYLGF 153
>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal| protein L13P; 30S ribosomal protein S9P] Length = 282 Score = 50.4 bits (119), Expect = 4e-06 Identities = 30/77 (38%), Positives = 44/77 (57%) Frame = -3 Query: 515 PSTSGAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRL 336 P P IF RTVRGM+P+K +G A LKA+ G+P + + + IPDA K + Sbjct: 68 PKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIPDA-KAGSI 126 Query: 335 QPGHKYCLLGELSKEVG 285 + G + LGE+S+ +G Sbjct: 127 KKGME---LGEISELLG 140
>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P| Length = 155 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/78 (34%), Positives = 40/78 (51%) Frame = -3 Query: 515 PSTSGAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRL 336 P P ++F VRGM+P RG ALARL+ + GVP + + P+A RL Sbjct: 75 PKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFPEA-DASRL 133 Query: 335 QPGHKYCLLGELSKEVGW 282 Y LG +++++GW Sbjct: 134 --SSHYIELGAVARQLGW 149
>RL13_PYRHO (O59300) 50S ribosomal protein L13P| Length = 142 Score = 46.6 bits (109), Expect = 5e-05 Identities = 28/72 (38%), Positives = 41/72 (56%) Frame = -3 Query: 491 KIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCL 312 +I RT+RGM+P KT RG A RLK + G+P + + I +A V RL KY Sbjct: 73 EIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEA-HVSRLS-RPKYVT 130 Query: 311 LGELSKEVGWNY 276 +GE++K +G + Sbjct: 131 VGEVAKFLGGKF 142
>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P| Length = 142 Score = 46.2 bits (108), Expect = 7e-05 Identities = 28/72 (38%), Positives = 41/72 (56%) Frame = -3 Query: 491 KIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCL 312 +I RT+RGM+P KT RG A RLK + G+P + + I +A V RL KY Sbjct: 73 EIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEFKDKQLETIVEA-HVSRLS-RPKYVT 130 Query: 311 LGELSKEVGWNY 276 +GE++K +G + Sbjct: 131 VGEVAKFLGGKF 142
>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)| Length = 145 Score = 45.4 bits (106), Expect = 1e-04 Identities = 28/73 (38%), Positives = 40/73 (54%) Frame = -3 Query: 497 PSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKY 318 P IF RT+RGM+PHK RG A ++ + G PYD ++ D + RL K+ Sbjct: 75 PDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYDEDGEVL--DGTSLDRLS-NIKF 129 Query: 317 CLLGELSKEVGWN 279 LGE+S+ +G N Sbjct: 130 VTLGEISETLGAN 142
>RL13_SULSO (P95991) 50S ribosomal protein L13P| Length = 149 Score = 45.1 bits (105), Expect = 1e-04 Identities = 27/74 (36%), Positives = 44/74 (59%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHK 321 +P I RT+RGM+P K+ +G L +K + GVP ++ + + PD+ V RL+ K Sbjct: 79 SPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS-DVSRLK--GK 134 Query: 320 YCLLGELSKEVGWN 279 Y + +SKE+GW+ Sbjct: 135 YVTVEVVSKELGWS 148
>RL13_METJA (P54023) 50S ribosomal protein L13P| Length = 137 Score = 42.7 bits (99), Expect = 7e-04 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = -3 Query: 515 PSTSGAPSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRL 336 P P I RT+R M+P+K P+G A R+K + G P K + + + K+ Sbjct: 66 PKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP------KNLTVDE--KISHK 117 Query: 335 QPGHKYCLLGELSKEVG 285 KY L ELSK +G Sbjct: 118 LNTTKYITLAELSKHLG 134
>RL13_SULAC (P39473) 50S ribosomal protein L13P| Length = 148 Score = 37.4 bits (85), Expect = 0.031 Identities = 28/71 (39%), Positives = 38/71 (53%) Frame = -3 Query: 497 PSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKY 318 P I RTVRGM+P K G+ LKA+ G+P + K M+ D V RL+ KY Sbjct: 78 PINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELE-GKSMIRFDDADVSRLK--GKY 133 Query: 317 CLLGELSKEVG 285 + ELS+ +G Sbjct: 134 ITVAELSRLLG 144
>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P| Length = 145 Score = 36.6 bits (83), Expect = 0.053 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = -3 Query: 497 PSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKY 318 P IF R +RGM+P+K G AL ++ + G P D + D + RL ++ Sbjct: 75 PDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDEDGD----VLDGTSLDRLST-IRF 129 Query: 317 CLLGELSKEVGWN 279 L E+S+E+G N Sbjct: 130 VTLSEVSEELGAN 142
>Y369_TREPA (O83384) Hypothetical protein TP0369 precursor| Length = 516 Score = 26.2 bits (56), Expect(2) = 1.1 Identities = 17/66 (25%), Positives = 27/66 (40%) Frame = -3 Query: 470 RGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGELSKE 291 R M+P + P E P R ++ + L+VL PG + +GE + + Sbjct: 183 RAMVPEEPPEDEV------------PRVSRAVQLAVGQKLEVL--YPGEGWVYVGEHTAQ 228 Query: 290 VGWNYH 273 G YH Sbjct: 229 PGLRYH 234 Score = 24.6 bits (52), Expect(2) = 1.1 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -1 Query: 580 PSEDEVPPLPPQADE--HQAVARSHPLPA 500 P + VPP PP A E +A ++ P PA Sbjct: 150 PKQRAVPPSPPPASEPPREAEVQAEPEPA 178
>RL13_HELPY (P56038) 50S ribosomal protein L13| Length = 141 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -3 Query: 500 APSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 387 AP K++ VRGM+P KT G+A + +LK + P+ Sbjct: 95 APEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131
>LEU1_PSEPK (Q88P28) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 557 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -2 Query: 516 PIHFRRPLENFLAHRARHDPAQDAPRRGCARQAEG 412 P+H R P L H A QDA R+G A+Q +G Sbjct: 320 PVHPRHPYVGDLVHTAFSGSHQDAIRKGFAKQQDG 354
>NAT_MYCSM (O86309) Arylamine N-acetyltransferase (EC 2.3.1.5)| Length = 275 Score = 30.4 bits (67), Expect = 3.8 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 300 KLAEKAVLMTRLQPQNLERVGDDHTLGAIIR 392 +L V TR +P L R GDDHTL A +R Sbjct: 140 RLEAGPVQQTRHEPYRLTRHGDDHTLAAQVR 170
>LEU1_PSESM (Q886Y1) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 556 Score = 30.0 bits (66), Expect = 5.0 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 516 PIHFRRPLENFLAHRARHDPAQDAPRRGCARQAEG 412 P+H R P L H A QDA R+G +Q EG Sbjct: 320 PVHPRHPYVGDLVHTAFSGSHQDAIRKGFTQQKEG 354
>RRF_CAUCR (Q9A706) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 188 Score = 30.0 bits (66), Expect = 5.0 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Frame = +1 Query: 337 SLRT--LSASGMTIRLVRS*GGGTPSNAFSLASAASPRGVLCGIMPRTVRQKIFEGA--- 501 SLRT SAS + +V + G TP NA + S PR + + R V + + Sbjct: 29 SLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQINVSVWDRGVVVSVEKAIRAS 88 Query: 502 -----PEVDGTVRRLGVHPLAEE 555 P V+G R+ + PL EE Sbjct: 89 GLGLNPVVEGQNLRIPIPPLTEE 111
>S13A3_MOUSE (Q91Y63) Solute carrier family 13 member 3 (Sodium-dependent| high-affinity dicarboxylate transporter 2) (Na(+)/dicarboxylate cotransporter 3) (NaDC-3) (mNaDC3) Length = 600 Score = 29.6 bits (65), Expect = 6.5 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = -3 Query: 212 RKQLAKLRVKAEKAAEEKLGSQLDILAPIKY*PAEQSCIVYFAG*WSLLFT 60 RK+ +K+R AE A+ + + L PIK+ AEQ+ + F LLF+ Sbjct: 308 RKKKSKIRADAEDQAKAVIQEEFQNLGPIKF--AEQAVFILFCTFAILLFS 356
>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 616 Score = 29.3 bits (64), Expect = 8.5 Identities = 21/68 (30%), Positives = 26/68 (38%) Frame = -1 Query: 358 TRSRF*GCSRVISTAFSASFPRRSGGTTMKLSXXXXXXXXXXXRSLTTGGSNWPSCASRL 179 T S+ G S+ A S SGGT K+ SLT S W CA Sbjct: 154 TVSKAYGASKTFGKAAGPSLSHNSGGTQSKV---------VPIASLTPYQSKWTICARVT 204 Query: 178 RRLQRRSW 155 + Q R+W Sbjct: 205 NKSQIRTW 212
>HSLU_RALSO (Q8Y3D8) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 443 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -3 Query: 227 VSYDRRKQLAKLRVKAEKAAEEKLGSQLDILAP 129 V R ++ K+R KAE AAE++L LD+L P Sbjct: 109 VKQTRESEMKKVRAKAEDAAEDRL---LDVLIP 138
>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14| Length = 857 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/64 (28%), Positives = 33/64 (51%) Frame = -3 Query: 482 WRTVRGMIPHKTPRGEAALARLKAFEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGE 303 W+ ++ ++ HKTP+ E R K + P YD M++ + ++ QP ++ E Sbjct: 225 WKEIQTLLSHKTPKSE---NRDKKEKPKPDAYD----MMVRELGFEMKAQPSNRMKTEAE 277 Query: 302 LSKE 291 L+KE Sbjct: 278 LAKE 281
>RL13_HELPJ (Q9ZMY6) 50S ribosomal protein L13| Length = 141 Score = 29.3 bits (64), Expect = 8.5 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -3 Query: 497 PSKIFWRTVRGMIPHKTPRGEAALARLKAFEGVPPPY 387 P K++ VRGM+P KT G+A + +LK + P+ Sbjct: 96 PEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131
>LEU1_PSEAE (Q9HXK5) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 556 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 516 PIHFRRPLENFLAHRARHDPAQDAPRRGCARQAE 415 P+H R P L H A QDA R+G A+Q E Sbjct: 320 PVHPRHPYVGDLVHTAFSGSHQDAIRKGFAQQKE 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,940,618 Number of Sequences: 219361 Number of extensions: 1434723 Number of successful extensions: 5302 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5283 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
