Clone Name | rbasd15i08 |
---|---|
Clone Library Name | barley_pub |
>DHE4_NEUIN (Q9HGU4) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) (NADP-dependent glutamate dehydrogenase) Length = 453 Score = 29.3 bits (64), Expect = 3.8 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = +1 Query: 22 TVIVLSGTDGIIVATSDTTVPLIELRH*SHMLIVKGSGGRWVSAAPCGHLPW----RPW 186 TV+ LS + G +VAT ++ + + ++ + ++ +K + S GHL W RPW Sbjct: 243 TVVSLSDSKGALVATGESGITVEDI---NAVMAIKEARQSLTSFQHAGHLKWIEGARPW 298
>DHE4_NEUCR (P00369) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) (NADP-dependent glutamate dehydrogenase) Length = 453 Score = 29.3 bits (64), Expect = 3.8 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = +1 Query: 22 TVIVLSGTDGIIVATSDTTVPLIELRH*SHMLIVKGSGGRWVSAAPCGHLPW----RPW 186 TV+ LS + G +VAT ++ + + ++ + ++ +K + S GHL W RPW Sbjct: 243 TVVSLSDSKGALVATGESGITVEDI---NAVMAIKEARQSLTSFQHAGHLKWIEGARPW 298
>IDI2_STRR6 (Q8DR48) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 336 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 298 GASGRGPCRTSPAPMERYTSWQRVGRVTMWKKSPRVVLCS 417 GA G RT +E YT + +G V WK R+++CS Sbjct: 267 GAKAVGLSRTVLELVETYTVEEVIGIVQGWKADLRLIMCS 306
>IDI2_STRPN (Q97SH8) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP| isomerase) (Isopentenyl pyrophosphate isomerase) Length = 336 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 298 GASGRGPCRTSPAPMERYTSWQRVGRVTMWKKSPRVVLCS 417 GA G RT +E YT + +G V WK R+++CS Sbjct: 267 GAKAVGLSRTVLELVETYTVEEVIGIVQGWKADLRLIMCS 306
>DNAK3_SYNY3 (P73098) Chaperone protein dnaK3 (Heat shock protein 70-3) (Heat| shock 70 kDa protein 3) (HSP70-3) Length = 771 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 274 RRCSPSPRGASGRGPCRTSPAPMERYTSWQRVGRVT 381 RR +P PR +GRGP + Y W + RVT Sbjct: 660 RREAPMPRAGAGRGPSLSKDYRSTAYADWDQ-SRVT 694
>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)| (Cell division cycle 2-like) Length = 952 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 313 GPCRTSPAPMERYTSWQRVGRVTMWKKSPRVVLCS 417 G R +P+++YTS VT+W ++P ++LCS Sbjct: 705 GLAREYGSPIKKYTSLV----VTLWYRAPELLLCS 735 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,441,218 Number of Sequences: 219361 Number of extensions: 906183 Number of successful extensions: 2768 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2682 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2768 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)