Clone Name	rbasd15i06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A	70	4e-12
2	GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A	67	3e-11
3	GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu...	65	7e-11
4	GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10	65	7e-11
5	GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7	65	7e-11
6	GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein	65	9e-11
7	GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2	63	5e-10
8	GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro...	63	5e-10
9	GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)	60	2e-09
10	GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon...	54	2e-07
11	ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)	53	4e-07
12	ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor	53	4e-07
13	ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur...	53	5e-07
14	ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec...	53	5e-07
15	ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur...	52	1e-06
16	ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec...	50	2e-06
17	ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur...	50	3e-06
18	ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur...	50	4e-06
19	ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro...	49	9e-06
20	HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4...	48	2e-05
21	CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r...	47	2e-05
22	CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine...	47	2e-05
23	CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine...	47	2e-05
24	CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine...	47	2e-05
25	CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine...	47	2e-05
26	CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine...	47	3e-05
27	ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor	47	3e-05
28	ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur...	45	8e-05
29	DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp...	45	1e-04
30	DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp...	45	1e-04
31	HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (...	45	1e-04
32	DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp...	45	1e-04
33	HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hn...	45	1e-04
34	RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ...	44	2e-04
35	RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ...	44	2e-04
36	BOLL_MACFA (Q8WP23) Protein boule-like	44	3e-04
37	BOLL_HUMAN (Q8N9W6) Protein boule-like	44	3e-04
38	TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)	44	3e-04
39	TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p...	44	3e-04
40	BOLL_MOUSE (Q924M5) Protein boule-like	43	4e-04
41	RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre...	43	4e-04
42	RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C...	43	5e-04
43	TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)	43	5e-04
44	RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h...	43	5e-04
45	TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)	43	5e-04
46	HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ...	42	7e-04
47	HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ...	42	7e-04
48	MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash...	42	7e-04
49	MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa...	42	7e-04
50	MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa...	42	7e-04
51	HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (...	42	9e-04
52	ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/...	42	9e-04
53	ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/...	42	9e-04
54	ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ...	42	0.001
55	MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa...	42	0.001
56	PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi...	42	0.001
57	MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa...	42	0.001
58	ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1	41	0.001
59	HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h...	41	0.001
60	ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ...	41	0.001
61	EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb...	41	0.001
62	RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS...	41	0.002
63	RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss...	41	0.002
64	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	40	0.002
65	ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ...	40	0.002
66	ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1 (...	40	0.002
67	RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h...	40	0.002
68	RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h...	40	0.002
69	ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1 (He...	40	0.002
70	ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1 (...	40	0.002
71	ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (...	40	0.002
72	ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1 (...	40	0.002
73	RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2	40	0.002
74	RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA	40	0.003
75	NUCL_RAT (P13383) Nucleolin (Protein C23)	40	0.003
76	RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F...	40	0.003
77	NUCL_MESAU (P08199) Nucleolin (Protein C23)	40	0.003
78	NUCL_PONPY (Q5RF26) Nucleolin	40	0.003
79	NUCL_MACFA (Q4R4J7) Nucleolin	40	0.003
80	NUCL_MOUSE (P09405) Nucleolin (Protein C23)	40	0.003
81	RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co...	40	0.003
82	RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He...	40	0.003
83	NUCL_HUMAN (P19338) Nucleolin (Protein C23)	40	0.003
84	ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (...	40	0.003
85	ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ...	40	0.004
86	EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (...	40	0.004
87	ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (...	40	0.004
88	RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h...	39	0.006
89	ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha...	39	0.006
90	ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)	39	0.006
91	ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2	39	0.006
92	ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	39	0.006
93	ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha...	39	0.006
94	ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo...	39	0.006
95	GAR2_SCHPO (P41891) Protein gar2	39	0.006
96	ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	39	0.006
97	RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin...	39	0.007
98	ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (...	39	0.007
99	TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran...	39	0.007
100	TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr...	39	0.007
101	TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr...	39	0.007
102	YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 i...	39	0.007
103	EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (...	39	0.007
104	ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn...	39	0.007
105	ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (...	39	0.007
106	SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl...	39	0.007
107	ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)	39	0.007
108	RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch...	39	0.007
109	TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)	39	0.009
110	TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)	39	0.009
111	PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi...	39	0.009
112	ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P...	39	0.009
113	TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)	38	0.012
114	RB97D_DROME (Q02926) Ribonucleoprotein RB97D	38	0.012
115	PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi...	38	0.012
116	PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi...	38	0.012
117	TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)	38	0.016
118	DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)	38	0.016
119	NUCL_CHICK (P15771) Nucleolin (Protein C23)	37	0.021
120	PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a...	37	0.021
121	PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-...	37	0.027
122	DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso...	37	0.027
123	CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit...	37	0.027
124	MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos...	37	0.027
125	PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi...	37	0.027
126	BOULE_DROME (Q24207) Protein boule	37	0.027
127	CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit...	37	0.027
128	DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso...	37	0.027
129	DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso...	37	0.027
130	SXL_MUSDO (O17310) Sex-lethal homolog	37	0.027
131	CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit...	37	0.036
132	CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit...	37	0.036
133	PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind...	37	0.036
134	PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi...	37	0.036
135	PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi...	37	0.036
136	PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi...	37	0.036
137	CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit...	37	0.036
138	PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi...	37	0.036
139	CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit...	37	0.036
140	YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i...	37	0.036
141	DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso...	37	0.036
142	ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E...	36	0.047
143	ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)	36	0.047
144	NUCL_XENLA (P20397) Nucleolin (Protein C23)	36	0.047
145	PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-...	36	0.061
146	SXL_CHRRU (O97018) Sex-lethal homolog	36	0.061
147	RSD1_SCHPO (O13845) RNA-binding protein rsd1	36	0.061
148	PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.061
149	SXL_DROSU (Q24668) Protein sex-lethal	35	0.080
150	SXL_DROME (P19339) Protein sex-lethal	35	0.080
151	PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b...	35	0.080
152	YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 i...	35	0.10
153	SXL_MEGSC (O01671) Sex-lethal homolog	35	0.10
154	PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g...	35	0.14
155	IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 R...	35	0.14
156	RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa...	35	0.14
157	PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5....	35	0.14
158	PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5....	35	0.14
159	SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)	35	0.14
160	RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri...	34	0.18
161	DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3	34	0.18
162	NSR1_YEAST (P27476) Nuclear localization sequence-binding protei...	34	0.18
163	DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2	34	0.18
164	DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1	34	0.18
165	MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing prote...	34	0.18
166	DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4	34	0.18
167	A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1	34	0.18
168	RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif pro...	34	0.18
169	A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1	34	0.18
170	YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 i...	34	0.23
171	SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli...	34	0.23
172	SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp...	34	0.23
173	SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp...	34	0.23
174	SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp...	34	0.23
175	SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp...	34	0.23
176	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	33	0.30
177	MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote...	33	0.30
178	MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos...	33	0.30
179	MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote...	33	0.30
180	RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interact...	33	0.30
181	MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote...	33	0.40
182	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	33	0.40
183	SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attach...	33	0.40
184	NAM8_YEAST (Q00539) Protein NAM8	33	0.40
185	SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold atta...	33	0.40
186	YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i...	33	0.52
187	SAP49_SCHPO (O14102) Spliceosome-associated protein 49	33	0.52
188	RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho...	33	0.52
189	RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p...	33	0.52
190	IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 s...	33	0.52
191	IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 s...	33	0.52
192	PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi...	33	0.52
193	PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi...	33	0.52
194	PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi...	33	0.52
195	PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi...	33	0.52
196	PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi...	33	0.52
197	PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi...	33	0.52
198	IF34_SCHPO (P78795) Probable eukaryotic translation initiation f...	32	0.67
199	RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interact...	32	0.67
200	RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15	32	0.67
201	RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	0.67
202	RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interact...	32	0.67
203	HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2...	32	0.67
204	SAFB2_HUMAN (Q14151) Scaffold attachment factor B2	32	0.67
205	RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interact...	32	0.67
206	RNP24_SCHPO (Q09100) RNA-binding protein rnp24	32	0.88
207	HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn...	32	0.88
208	HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (...	32	0.88
209	HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (...	32	0.88
210	SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2	32	0.88
211	MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos...	32	0.88
212	DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding prote...	32	0.88
213	CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1	32	1.2
214	CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip...	32	1.2
215	HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hn...	32	1.2
216	DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1	32	1.2
217	DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding prote...	32	1.2
218	FCA_ARATH (O04425) Flowering time control protein FCA	31	1.5
219	MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos...	31	1.5
220	MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phos...	31	1.5
221	HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (...	31	1.5
222	CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (C...	31	1.5
223	CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (C...	31	1.5
224	MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote...	31	1.5
225	RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p...	31	1.5
226	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	31	1.5
227	RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p...	31	1.5
228	SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich...	31	1.5
229	IF34_CAEEL (Q19706) Probable eukaryotic translation initiation f...	31	1.5
230	GPMA_PHOLL (Q7N6S0) 2,3-bisphosphoglycerate-dependent phosphogly...	31	1.5
231	HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (...	31	2.0
232	PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5....	31	2.0
233	IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SN...	31	2.0
234	HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (...	30	2.6
235	NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO...	30	2.6
236	HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hn...	30	2.6
237	TRA2_DROME (P19018) Transformer-2 sex-determining protein	30	3.3
238	U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux...	30	3.3
239	NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA...	30	3.3
240	SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)	30	3.3
241	MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote...	30	3.3
242	DAZ1_CAEEL (Q20870) DAZ protein 1	30	3.3
243	FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protei...	30	4.4
244	FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protei...	30	4.4
245	CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity fa...	30	4.4
246	CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity fa...	30	4.4
247	CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity fa...	30	4.4
248	RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)	30	4.4
249	CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity fa...	30	4.4
250	K0256_MOUSE (Q6A098) Protein KIAA0256	30	4.4
251	GPMA_BUCAI (P57390) 2,3-bisphosphoglycerate-dependent phosphogly...	29	5.7
252	IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 9...	29	5.7
253	PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin...	29	5.7
254	RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p...	29	5.7
255	RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro...	29	5.7
256	LACA_LACLA (P23494) Galactose-6-phosphate isomerase subunit lacA...	29	7.5
257	SCE3_SCHPO (O14369) Probable RNA-binding protein sce3	29	7.5
258	CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa...	29	7.5
259	K0256_HUMAN (Q93073) Protein KIAA0256	29	7.5
260	YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 i...	29	7.5
261	ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu...	28	9.7
262	RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U...	28	9.7
263	MSA1_SCHPO (Q10277) Multicopy suppressor of sporulation protein ...	28	9.7
264	ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu...	28	9.7
265	SGN1_YEAST (P40561) RNA-binding protein SGN1	28	9.7

---

>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AFSQYGE+LD+KIINDRETGRSRGFGFVTF  E+SM
Sbjct: 24  LETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSM 62

---

>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AFSQ+GE++D+KIINDRETGRSRGFGFVTF  E+SM
Sbjct: 24  LETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSM 62

---

>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AF+ YGEILD+K+I DRETGRSRGFGFVTF SE SM
Sbjct: 24  LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSM 62

---

>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FSQ+GE++D+KIINDRETGRSRGFGFVTF  E+SM
Sbjct: 22  LERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSM 60

---

>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 28/39 (71%), Positives = 36/39 (92%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AF+QYG+++D+KIINDRETGRSRGFGFVTF  E++M
Sbjct: 24  LETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

---

>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AFSQ+G+I D+KIINDRETGRSRGFGFVTF  E+SM
Sbjct: 22  LEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSM 60

---

>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 26/39 (66%), Positives = 35/39 (89%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AF+ +G+++D+K+I DRETGRSRGFGFVTF SE+SM
Sbjct: 24  LEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSM 62

---

>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           LQ  FSQ+G+++D+KIINDRE+GRSRGFGFVTF  E++M
Sbjct: 22  LQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAM 60

---

>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L +AFS YGE+L++KII DRET RSRGFGFVTF +EE+M
Sbjct: 3   LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAM 41

---

>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           L+ AF+ +G+++DAK+I DRETGRSRGFGFV F  E
Sbjct: 51  LRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86

---

>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 21/39 (53%), Positives = 32/39 (82%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++G+++ A++++DRETGRSRGFGFVT  SE  +
Sbjct: 165 LEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEV 203



 Score = 36.2 bits (82), Expect = 0.047
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F   G +  A++I +RET RSRGFGFVT  + E
Sbjct: 71  LAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVE 107

---

>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++G+++ A+++ DRETGRSRGFGFVT  SE  M
Sbjct: 246 LEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEM 284



 Score = 35.4 bits (80), Expect = 0.080
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F Q G +  A++I +R+T +SRGFGFVT  + E
Sbjct: 152 LARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVE 188

---

>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 21/39 (53%), Positives = 32/39 (82%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS+ G+++DAK++ DR++GRSRGFGFVT+ S E +
Sbjct: 210 LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 248



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L   F + G +   ++I D+ TGRSRGFGFVT  S+E +
Sbjct: 103 LAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

---

>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 21/39 (53%), Positives = 32/39 (82%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS+ G+++DAK++ DR++GRSRGFGFVT+ S E +
Sbjct: 204 LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 242



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L   F + G +   ++I D+ TGRSRGFGFVT  S+E +
Sbjct: 103 LAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

---

>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 21/39 (53%), Positives = 31/39 (79%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++G+++ A+++ DRE+GRSRGFGFVT  SE  M
Sbjct: 207 LEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEM 245



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F Q G +  A++I +RET RSRGFGFVT  + E
Sbjct: 113 LAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVE 149

---

>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 20/39 (51%), Positives = 31/39 (79%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS+ G ++DAK++ DR++GRSRGFGFVT+ S + +
Sbjct: 223 LKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L   F + G +   ++I D+ TGRSRGFGFVT  ++E +
Sbjct: 103 LAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEV 141

---

>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 20/39 (51%), Positives = 31/39 (79%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS+ G ++DAK++ DR++GRSRGFGFVT+ S + +
Sbjct: 224 LKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262



 Score = 36.6 bits (83), Expect = 0.036
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L   F + G +   ++I D+ +GRSRGFGFVT  ++E +
Sbjct: 104 LAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEV 142

---

>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 19/39 (48%), Positives = 31/39 (79%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++G++++A+++ DRETGRSRGFGFVT    + +
Sbjct: 260 LEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDEL 298



 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L   F Q G +  A++I +RET +SRGFGFVT  S
Sbjct: 166 LAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS 200

---

>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 18/39 (46%), Positives = 33/39 (84%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L++ FS+ G++++A++I DR++GRS+GFGFVT+ S + +
Sbjct: 220 LESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEV 258



 Score = 35.8 bits (81), Expect = 0.061
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L   F   G +   ++I D+ TGRSRGFGFVT  S
Sbjct: 107 LAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSS 141

---

>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 19/35 (54%), Positives = 31/35 (88%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           FSQ+G I+DA+++ D++TG+SRGFGFVT+ S +++
Sbjct: 263 FSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297



 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F +YG + D KI+ D  TGRSRGFGF++F    S+
Sbjct: 175 LREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSV 213

---

>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG+I +  ++ DRET RSRGFGFVTF
Sbjct: 22  LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54

---

>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG+I +  ++ DRET RSRGFGFVTF
Sbjct: 22  LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54

---

>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG+I +  ++ DRET RSRGFGFVTF
Sbjct: 22  LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54

---

>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG+I +  ++ DRET RSRGFGFVTF
Sbjct: 22  LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54

---

>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG+I +  ++ DRET RSRGFGFVTF
Sbjct: 22  LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54

---

>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+ AF++YG I +  ++ DRET RSRGFGFVTF
Sbjct: 21  LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTF 53

---

>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+ AF+     + AK+I DR +GRSRGFGF+TF S E+M
Sbjct: 233 LRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAM 271



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F++ G + + +I+ DR T RSRGF FVT GS E
Sbjct: 130 LSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVE 166

---

>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 17/39 (43%), Positives = 31/39 (79%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F++ G++++A++I DR++GRS+GFGFVT  S + +
Sbjct: 273 LENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEV 311



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L   F   G +   ++I D+ TGRSRGFGFVT  +
Sbjct: 115 LAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMST 149

---

>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ FSQYGE++D  I+ D+ T +SRGFGFV F
Sbjct: 26  LRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F+++G + +  +I D E  R RGFGF+TF  E+S+
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 168

---

>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ FSQYGE++D  I+ D+ T +SRGFGFV F
Sbjct: 26  LRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F ++G + +  +I D E  R RGFGF+TF  E+S+
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167

---

>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome) (Glycoprotein
           p43)
          Length = 391

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L+A F +YG I++  ++ DRET +SRGF FVTF S
Sbjct: 24  LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFES 58

---

>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ FSQYGE++D  I+ D+ T +SRGFGFV F
Sbjct: 26  LRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F ++G + +  +I D E  R RGFGF+TF  E+S+
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 167

---

>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L+A F +YG I++  ++ DRET +SRGF FVTF S
Sbjct: 24  LEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFES 58

---

>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I +  ++ DRET RSRGFGF+TF + E
Sbjct: 22  LEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPE 58

---

>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I +  ++ DRET RSRGFGF+TF + E
Sbjct: 22  LEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPE 58

---

>BOLL_MACFA (Q8WP23) Protein boule-like|
          Length = 283

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FSQYG + + KI+NDR  G S+G+GFVTF ++E
Sbjct: 49  LRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQE 84

---

>BOLL_HUMAN (Q8N9W6) Protein boule-like|
          Length = 283

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FSQYG + + KI+NDR  G S+G+GFVTF ++E
Sbjct: 49  LRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQE 84

---

>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 16/33 (48%), Positives = 27/33 (81%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++AAF+ +G I DA+++ D  TG+S+G+GFV+F
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

---

>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 16/33 (48%), Positives = 27/33 (81%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++AAF+ +G I DA+++ D  TG+S+G+GFV+F
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSF 154

---

>BOLL_MOUSE (Q924M5) Protein boule-like|
          Length = 281

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/37 (51%), Positives = 28/37 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FSQYG + + KI+NDR  G S+G+GF+TF ++E
Sbjct: 49  LRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQE 84

---

>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 18/38 (47%), Positives = 29/38 (76%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+ AFS +  + +A+++ ++ TGRSRG+GFV F SE+S
Sbjct: 47  LKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDS 84

---

>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMXXXXXXXXXXRPVEVLSAGPR 304
           L   F ++G+I+D  ++ + E+GRSRGFGFVTF    ++              VL  GP 
Sbjct: 23  LSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN------------HVLQNGPH 70

Query: 303 LIAQLSIHP 277
            +   +I P
Sbjct: 71  TLDGRTIDP 79



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 16/39 (41%), Positives = 28/39 (71%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F++YG++ +  I+ D+E  +SRGFGF++F  E S+
Sbjct: 112 LRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV 150

---

>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 15/33 (45%), Positives = 28/33 (84%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +++AF+ +G+I DA+++ D  TG+S+G+GFV+F
Sbjct: 113 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 145

---

>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG+I   +II D+++G+ RGFGFVTF   +
Sbjct: 116 LREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHD 152



 Score = 36.6 bits (83), Expect = 0.036
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  + Q+G++ D  ++ D  + RSRGFGFVTF
Sbjct: 25  LRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTF 57

---

>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 15/33 (45%), Positives = 28/33 (84%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +++AF+ +G+I DA+++ D  TG+S+G+GFV+F
Sbjct: 130 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 162

---

>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++GE++D  +  D  TGRSRGFGFV F   ES+
Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 151



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +GE+   ++  D +T + RGF F+TF  EE
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234

---

>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++GE++D  +  D  TGRSRGFGFV F   ES+
Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 151



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +GE+   ++  D +T + RGF F+TF  EE
Sbjct: 202 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234

---

>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+G++ DA ++ D+ T R RGFGFVTF SE+
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F Q+GE+ +  ++ D  T RSRGFGFVTF
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF 68

---

>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+G++ DA ++ D+ T R RGFGFVTF SE+
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F Q+GE+ +  ++ D  T RSRGFGFVTF
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF 68

---

>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+G++ DA ++ D+ T R RGFGFVTF SE+
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F Q+GE+ +  ++ D  T RSRGFGFVTF
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF 68

---

>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L+A F +YG I++  ++ DRET +SRGF FVT  S
Sbjct: 24  LEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLES 58

---

>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 353

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG+I   +II DR++G+ RGFGFVTF   +
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L+  + Q+G++ D  ++ D  + RSRGFGFVTF S
Sbjct: 37  LRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71

---

>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 341

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG+I   +II DR++G+ RGFGFVTF   +
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L+  + Q+G++ D  ++ D  + RSRGFGFVTF S
Sbjct: 25  LRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59

---

>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F Q+GEI+D  ++ D +T RSRGFGF+T+
Sbjct: 33  LKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 65



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F QYG ++ A I+ D+ET + RGF FV F
Sbjct: 124 LRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEF 156

---

>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+G++ DA ++ D+ T R RGFGFVTF +E+
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 162



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++GEI +  ++ D  T RSRGFGFVTF    S+
Sbjct: 37  LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASV 75

---

>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGS 379
           L+ AFS YG I  AK++ D E GRS+GFGFV F +
Sbjct: 303 LRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNA 336



 Score = 36.2 bits (82), Expect = 0.047
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FS +G IL  K+  D E G S+G+GFV F +EE+
Sbjct: 110 FSAFGNILSCKVATD-EKGNSKGYGFVHFETEEA 142



 Score = 34.7 bits (78), Expect = 0.14
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F  YG+I   K+++ +E G+S+GFGFV F + E+
Sbjct: 199 LKEFFEPYGKITSYKVMS-KEDGKSKGFGFVAFETTEA 235

---

>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+G++ DA ++ D+ T R RGFGFVTF +E+
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 162



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++GEI +  ++ D  T RSRGFGFVTF    S+
Sbjct: 37  LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASV 75

---

>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           +SQ+GEI D  ++ D  T RSRGFGFVTF  +
Sbjct: 43  YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           F++YG +  ++II D+ T + RGFGFVTF   +S+
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168

---

>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 353

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS++G+++D  +  D  TGRSRGFGFV F   ES+
Sbjct: 111 LKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESV 149



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +GE+   ++  D +T + RGF F+TF  EE
Sbjct: 200 FGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 232

---

>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F+++GE++D  I  D  TGRSRGFGF+ F    S+
Sbjct: 91  LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSV 129



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+GEI   ++  D +  + RGF F+TF  E+
Sbjct: 179 FGQFGEIEAIELPIDPKLNKRRGFVFITFKEED 211

---

>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G  L  K++ D +TGRSRGFGFV +G+ E
Sbjct: 207 LREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHE 242



 Score = 36.6 bits (83), Expect = 0.036
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS YG I  AK++   E G S+GFGFV F S E
Sbjct: 310 LRKEFSPYGTITSAKVMT--EGGHSKGFGFVCFSSPE 344



 Score = 32.0 bits (71), Expect = 0.88
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D     SRG+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEA 150

---

>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVT 388
           L+  F  +G+I +A +I DR+TG+SRG+GFVT
Sbjct: 27  LRKYFEGFGDIEEAVVITDRQTGKSRGYGFVT 58

---

>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVT 388
           L+  F  +G+I +A +I DR+TG+SRG+GFVT
Sbjct: 48  LRKYFEGFGDIEEAVVITDRQTGKSRGYGFVT 79

---

>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FSQYGEI++  ++ D++TG+S+GF F+ +  + S
Sbjct: 56  FSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89

---

>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F+++GE++D  I  D  TGRSRGFGF+ F    S+
Sbjct: 84  LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASV 122



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F ++GEI   ++  D +  + RGF F+TF  EE
Sbjct: 173 FGEFGEIEAIELPMDPKLNKRRGFVFITFKEEE 205

---

>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (Unwinding protein 1)
           (UP1) (Fragment)
          Length = 195

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L++ F Q+G + D  ++ D  T RSRGFGFVT+ + E +
Sbjct: 29  LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F QYG+I   +I+ DR +G+ RGF FVTF   +S+
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158

---

>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2|
           (hnRNP A3(B))
          Length = 385

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F Q+G++ D  ++ D +T RSRGFGFVT+   E +
Sbjct: 43  LREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F  YG+I   +++ DR++G+ RGF FVTF   +++
Sbjct: 134 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 172

---

>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1|
           (hnRNP A3(A))
          Length = 373

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F Q+G++ D  ++ D +T RSRGFGFVT+   E +
Sbjct: 43  LREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81



 Score = 35.8 bits (81), Expect = 0.061
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -2

Query: 462 YGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           YG+I   +++ DR++G+ RGF FVTF   +++
Sbjct: 141 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 172

---

>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (HDP)
          Length = 319

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L++ F Q+G + D  ++ D  T RSRGFGFVT+ + E +
Sbjct: 29  LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F QYG+I   +I+ DR +G+ RGF FVTF   +S+
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158

---

>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1) (HDP-1)
           (Topoisomerase-inhibitor suppressed)
          Length = 319

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L++ F Q+G + D  ++ D  T RSRGFGFVT+ + E +
Sbjct: 29  LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F QYG+I   +I+ DR +G+ RGF FVTF   +S+
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158

---

>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L++ F Q+G + D  ++ D  T RSRGFGFVT+ + E +
Sbjct: 29  LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 67



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F QYG+I   +I+ DR +G+ RGF FVTF    S+
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSV 158

---

>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L++ F Q+G + D  ++ D  T RSRGFGFVT+ + E +
Sbjct: 29  LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F QYG+I   +I+ DR +G+ RGF FVTF   +S+
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSV 158

---

>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FSQYGEI++  ++ D++TG+S+GF F+ +  + S
Sbjct: 56  FSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89

---

>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA|
          Length = 101

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFV 391
           L A F++YG +   ++  DRETGR RGFGFV
Sbjct: 17  LTAVFAEYGSVKRVQLPTDRETGRMRGFGFV 47

---

>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 444 AKIINDRETGRSRGFGFVTFGSEE 373
           A+I+ DRETG S+GFGFV F SEE
Sbjct: 600 ARIVTDRETGSSKGFGFVDFNSEE 623

---

>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+A F ++G I+D  ++ D +T RSRGFGF+T+
Sbjct: 40  LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F  +G+I+   I++D++TG+ RGF F+ F
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEF 163

---

>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 444 AKIINDRETGRSRGFGFVTFGSEE 373
           A+I+ DRETG S+GFGFV F SEE
Sbjct: 597 ARIVTDRETGSSKGFGFVDFNSEE 620

---

>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 444 AKIINDRETGRSRGFGFVTFGSEE 373
           A+I+ DRETG S+GFGFV F SEE
Sbjct: 599 ARIVTDRETGSSKGFGFVDFNSEE 622

---

>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 444 AKIINDRETGRSRGFGFVTFGSEE 373
           A+I+ DRETG S+GFGFV F SEE
Sbjct: 598 ARIVTDRETGSSKGFGFVDFNSEE 621

---

>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 444 AKIINDRETGRSRGFGFVTFGSEE 373
           A+I+ DRETG S+GFGFV F SEE
Sbjct: 594 ARIVTDRETGSSKGFGFVDFNSEE 617

---

>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F  +G I   +++ D ETGRS+G+GF+TF   E
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS  G++ D ++I+DR + RSRG  +V F
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEF 201

---

>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F  +G I   +++ D ETGRS+G+GF+TF   E
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS  G++ D ++I+DR + RS+G  +V F
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEF 201

---

>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 444 AKIINDRETGRSRGFGFVTFGSEE 373
           A+I+ DRETG S+GFGFV F SEE
Sbjct: 597 ARIVTDRETGSSKGFGFVDFNSEE 620

---

>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+A F ++G I+D  ++ D  T RSRGFGF+T+ S  SM
Sbjct: 47  LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY-SHSSM 84



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTF 385
           F  +G I+D  I+ D+ETG+ RGF FV F
Sbjct: 142 FQHFGNIVDINIVIDKETGKKRGFAFVEF 170

---

>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F QYG+I   +I+ DR +G+ RGF FVTF   +S+
Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSV 159



 Score = 37.0 bits (84), Expect = 0.027
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F Q+G + D  ++ D  + RSRGFGFVT+ S + +
Sbjct: 30  LREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEV 68

---

>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G  L  K++ D ++GRSRGFGFV +G+ E
Sbjct: 207 LREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHE 242



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F  YG I  AK++   E G S+GFGFV F S E
Sbjct: 310 LRKEFLPYGTITSAKVMT--EGGHSKGFGFVCFSSPE 344



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D     SRG+GFV F + E+
Sbjct: 115 LYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEA 150

---

>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 16/34 (47%), Positives = 26/34 (76%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FSQ+G +  A+II D+++G+ RGFGFV F + ++
Sbjct: 118 FSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDA 151



 Score = 32.7 bits (73), Expect = 0.52
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F  +G + D  ++ + +T RSR FGFVT+ + E
Sbjct: 23  LRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVE 59

---

>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG+I   +II D+++G+ RGF FVTF   +
Sbjct: 116 LREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHD 152



 Score = 35.4 bits (80), Expect = 0.080
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  + Q+G + D  ++ D  + RSRGFGFVTF
Sbjct: 25  LRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTF 57

---

>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 153 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 185



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 68  RSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 99



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 322 FGPFGAVNNVKVIRDFNTNKCKGFGFVT 349

---

>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 296 FGPFGAVTNVKVIRDFNTNKCKGFGFVT 323

---

>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 296 FGPFGAVTNVKVIRDFNTNKCKGFGFVT 323

---

>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 296 FGPFGAVTNVKVIRDFNTNKCKGFGFVT 323

---

>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 148 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 180



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 63  RSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 94



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 317 FGPFGAVNNVKVIRDFNTNKCKGFGFVT 344

---

>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 173



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 56  RSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 310 FGPFGAVNNVKVIRDFNTNKCKGFGFVT 337

---

>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F +YG I+ A++I D ++GRS+G+G+V F + E+
Sbjct: 283 FEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEA 316



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L  AF   G+I   ++  D ++GR +GFG+VTF   +S
Sbjct: 382 LSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDS 419

---

>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ F   GEI   K++ D+ TG+S G+GFV +
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 297 FGPFGAVTNVKVIRDFNTNKCKGFGFVT 324

---

>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F  +G+I +  ++ D +TGRS+G+GF+TF   E
Sbjct: 279 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS  G++ D +II+DR + RS+G  +V F   +S+
Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSV 220

---

>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 378

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 15/39 (38%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F +YG+I   +++ DR++G+ RGF FVTF   +++
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 180



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F ++G + D  ++ D +T RSRGFGFVT+   E +
Sbjct: 51  LREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89

---

>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG I D  I+ D+++ RSRGF FV F
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYF 166

---

>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG I D  I+ D+++ RSRGF FV F
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYF 166

---

>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG I D  I+ D+++ RSRGF FV F
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYF 166

---

>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I|
          Length = 219

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L  AFS+Y  ++  K++ DRE G++RGFGFV+F
Sbjct: 46  LYQAFSEYPSLVKTKVVRDRE-GKTRGFGFVSF 77

---

>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G  L  K++ D  +GRSRGFGFV +G+ E
Sbjct: 207 LKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHE 242



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS YG I   K++   E G S+GFGFV F S E
Sbjct: 310 LRKEFSPYGTITSTKVMT--EGGHSKGFGFVCFSSPE 344



 Score = 32.7 bits (73), Expect = 0.52
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G+IL  K++ D E G SRG+GFV F ++E+
Sbjct: 115 LYDTFSAFGDILSCKVVCD-EYG-SRGYGFVHFETQEA 150

---

>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 15/39 (38%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F +YG+I   +++ DR++G+ RGF FVTF   +++
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 180



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F ++G + D  ++ D +T RSRGFGFVT+   E +
Sbjct: 51  LREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89

---

>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 15/39 (38%), Positives = 27/39 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F +YG+I   +++ DR++G+ RGF FVTF   +++
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV 180



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F ++G + D  ++ D +T RSRGFGFVT+   E +
Sbjct: 51  LREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89

---

>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F +YGEI    +  D +TGRSRGF F+ F + E++
Sbjct: 72  LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAI 110



 Score = 33.1 bits (74), Expect = 0.40
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           ++  F Q+G I++ ++  D++  + +GF F+TF SE+
Sbjct: 152 IKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQ 188

---

>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 MEQLFSQYGRIITSRILLDQATGVSRGVGFIRF 173



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++ F   G+I   K++ D+ TG+S G+GFV +
Sbjct: 56  KSLFGSIGDIESCKLVRDKITGQSLGYGFVNY 87



 Score = 32.0 bits (71), Expect = 0.88
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 304 FGPFGAVTNVKVIRDFTTNKCKGFGFVT 331

---

>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FS+ G++L AK+     T +S GFGFV+F SEE +
Sbjct: 200 LKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238



 Score = 32.0 bits (71), Expect = 0.88
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+    ++G I  A+++ D+ +GRSR FGFVT  + E
Sbjct: 100 LRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVE 136

---

>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG +    ++ D+ TGRSRGF FV F
Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYF 165

---

>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS+YG +    ++ D+ TGRSRGF FV F
Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYF 167

---

>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+ AFS +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 35.4 bits (80), Expect = 0.080
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F ++G  L  K++ D E+G+S+GFGFV+F   E
Sbjct: 207 LKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242

---

>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++  FSQYG I+ ++I+ D+ TG SRG GF+ F
Sbjct: 141 MEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 173



 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++ F   G+I   K++ D+ TG+S G+GFV +
Sbjct: 56  KSLFGSIGDIESCKLVRDKITGQSLGYGFVNY 87



 Score = 32.0 bits (71), Expect = 0.88
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVT 388
           F  +G + + K+I D  T + +GFGFVT
Sbjct: 304 FGPFGAVTNVKVIRDFTTNKCKGFGFVT 331

---

>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS +GE+L  ++  D +TG S+GFGFV F   E+
Sbjct: 120 LKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET 157

---

>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  + Q+G+++D  ++ D  T RSRGFGF+T+
Sbjct: 48  LKLFYGQWGKVVDVVVMRDAATKRSRGFGFITY 80



 Score = 37.4 bits (85), Expect = 0.021
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F Q+G ++  K++ D+ TG+ RGF FV F   +++
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAV 177

---

>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FS +G IL  K+  D  TGRS+G+GFV F  EES
Sbjct: 156 FSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEES 188



 Score = 33.9 bits (76), Expect = 0.23
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS+YG +  +K++ + + G SRGFGFV + + E
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPE 383

---

>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+A FS +G I  AKI+ D E G+S+GFGFV + + E
Sbjct: 380 LKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPE 415



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+GEI    ++ D +  + RGFGFV + + E
Sbjct: 281 FGQFGEITSLSLVKD-QNDKPRGFGFVNYANHE 312

---

>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS +GE+L  ++  D +TG S+GFGFV F   E+
Sbjct: 120 LKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYET 157

---

>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)|
          Length = 289

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +++ F QYG + + KII DR TG S+G+GFV+F
Sbjct: 52  IRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSF 83

---

>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 450 LDAKIINDRETGRSRGFGFVTFGSEE 373
           + A+I+ DR+TG S+GFGFV F S E
Sbjct: 577 ISARIVTDRDTGSSKGFGFVDFSSPE 602

---

>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           L   FS +G+IL +KI  D E G+S+GFGFV F  E
Sbjct: 141 LYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEE 175



 Score = 36.2 bits (82), Expect = 0.047
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F+ YG I  AK++   E G+S+GFGFV F + E
Sbjct: 337 LEEEFAPYGTITSAKVMRT-ENGKSKGFGFVCFSTPE 372



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           Q  F+++G I+ A +  D + G+ +GFGFV +   E
Sbjct: 235 QELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHE 269

---

>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F QYG  L  K++ D + G+SRGFGFV+F   E
Sbjct: 207 LKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHE 242



 Score = 35.8 bits (81), Expect = 0.061
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F+ +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFTPFGSITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D E G S+G+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150

---

>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 16/33 (48%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +++ F++YG + + KII DR TG S+G+GFV+F
Sbjct: 56  IRSFFARYGSVKEVKIITDR-TGVSKGYGFVSF 87

---

>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS+ G ++  +++ DRETG+ +G+GF  +  +E+
Sbjct: 32  LKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQET 69

---

>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L++ F Q+G++L  ++   ++TG S+G+GFV F  +E
Sbjct: 61  LKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDE 97

---

>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPE 344



 Score = 36.2 bits (82), Expect = 0.047
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FSQ+G+ L  K++ D   G+S+GFGFV++   E
Sbjct: 207 LKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHE 242

---

>BOULE_DROME (Q24207) Protein boule|
          Length = 228

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   FS YG +   KII DR  G S+G+GFVTF +E+
Sbjct: 49  LTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQ 84

---

>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS+ G ++  +++ DRETG+ +G+GF  +  +E+
Sbjct: 32  LKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQET 69

---

>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 16/33 (48%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +++ F++YG + + KII DR TG S+G+GFV+F
Sbjct: 56  IRSFFARYGSVKEVKIITDR-TGVSKGYGFVSF 87

---

>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 16/33 (48%), Positives = 26/33 (78%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +++ F++YG + + KII DR TG S+G+GFV+F
Sbjct: 56  IRSFFARYGSVKEVKIITDR-TGVSKGYGFVSF 87

---

>SXL_MUSDO (O17310) Sex-lethal homolog|
          Length = 324

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG I+   I+ D+ TGR RG  FV F   E
Sbjct: 204 LEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKRE 240

---

>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS+ G ++  +++ DRETG+ +G+GF  +  +E+
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQET 69

---

>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS+ G ++  +++ DRETG+ +G+GF  +  +E+
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQET 69

---

>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 35.8 bits (81), Expect = 0.061
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F ++G  L  K++ D E+G+S+GFGFV+F   E
Sbjct: 207 LKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D E G S+G+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150

---

>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 35.8 bits (81), Expect = 0.061
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F ++G  L  K++ D E+G+S+GFGFV+F   E
Sbjct: 207 LKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D E G S+G+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150

---

>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 35.4 bits (80), Expect = 0.080
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F ++G  L  K++ D E+G+S+GFGFV+F   E
Sbjct: 207 LKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D E G S+G+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150

---

>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 35.4 bits (80), Expect = 0.080
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F ++G  L  K++ D E+G+S+GFGFV+F   E
Sbjct: 207 LKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE 242



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D E G S+G+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150

---

>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS+ G ++  +++ DRETG+ +G+GF  +  +E+
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQET 69

---

>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+ AF +YG+I  A ++ D E G+S+GFGFV F
Sbjct: 231 LKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNF 262



 Score = 35.4 bits (80), Expect = 0.080
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G I+  K+  D  +G+S+G+GFV + +EES
Sbjct: 140 LHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEES 176



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS +G +  +K++ D   G S+G GFV F + E
Sbjct: 334 LKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPE 369

---

>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  FS+ G ++  +++ DRETG+ +G+GF  +  +E+
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQET 69

---

>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF--GSEESM 367
           L   FS+YG IL  K+I D+  G   G+GF+++  GS+ S+
Sbjct: 211 LSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASL 251



 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 19/50 (38%)
 Frame = -2

Query: 471 FSQYGEILDAKII-------------------NDRETGRSRGFGFVTFGS 379
           +  +GEI+  K+I                   ND   G SRG+GFV+F S
Sbjct: 560 YKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGFVSFES 609

---

>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           ++  F++YG + + KII DR TG S+G+GFV+F
Sbjct: 56  IRGFFARYGSVKEVKIITDR-TGVSKGYGFVSF 87

---

>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ FS  GE+  AK+I D+  G S G+GFV +
Sbjct: 36  LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNY 68



 Score = 33.1 bits (74), Expect = 0.40
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +G + + K+I D  T + +GFGFVT  + E
Sbjct: 264 FGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYE 296

---

>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L++ FS  GE+  AK+I D+  G S G+GFV +
Sbjct: 36  LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNY 68



 Score = 33.1 bits (74), Expect = 0.40
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +G + + K+I D  T + +GFGFVT  + E
Sbjct: 264 FGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYE 296

---

>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = -2

Query: 450 LDAKIINDRETGRSRGFGFVTFGSEE 373
           ++A+I+ DR+TG S+GFGFV F + E
Sbjct: 526 VNARIVTDRDTGASKGFGFVDFSTAE 551

---

>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG  L  K++ D + G+S+GFGFV+F   E
Sbjct: 207 LKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHE 242



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F  +G I  AK++   E GRS+GFGFV F S E
Sbjct: 310 LRKEFLPFGTITSAKVM--MEGGRSKGFGFVCFSSPE 344



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K++ D E G S+G+GFV F ++E+
Sbjct: 115 LYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEA 150

---

>SXL_CHRRU (O97018) Sex-lethal homolog|
          Length = 307

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F +YG I+   I+ D+ TG+ RG  FV F   E
Sbjct: 187 LEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKRE 223

---

>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           F Q G + DA+I+ D+ +GRS+G  +V F  E+S+
Sbjct: 260 FEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSV 294

---

>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL  K+  D   GRS+G+GFV F  EE+
Sbjct: 148 LYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEET 184



 Score = 33.9 bits (76), Expect = 0.23
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS+YG +   K++ + + G SRGFGFV + + E
Sbjct: 344 LKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPE 379

---

>SXL_DROSU (Q24668) Protein sex-lethal|
          Length = 354

 Score = 35.4 bits (80), Expect = 0.080
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F +YG I+   I+ D+ TGR RG  FV +   E
Sbjct: 229 LDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKRE 265

---

>SXL_DROME (P19339) Protein sex-lethal|
          Length = 354

 Score = 35.4 bits (80), Expect = 0.080
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F +YG I+   I+ D+ TGR RG  FV +   E
Sbjct: 227 LDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKRE 263

---

>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 35.4 bits (80), Expect = 0.080
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+ AF  +   L   ++ D +TG SRG+GFV+F S++
Sbjct: 177 LRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQD 213

---

>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I|
          Length = 297

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           LQ  FS++G +   +I+ +  T  SRGFGF++F + E
Sbjct: 117 LQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVE 153

---

>SXL_MEGSC (O01671) Sex-lethal homolog|
          Length = 321

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           L + F   G I   +I+ D +TG S G+GFV FGSE
Sbjct: 94  LYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSE 129

---

>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FSQ G I   K++ D E G+S+GFGFV F + E
Sbjct: 320 LRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPE 355



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           LQ  F ++G I+  K+    E G+SRG+GFV F  E++
Sbjct: 128 LQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDA 164

---

>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding|
           subunit (eIF-3 RNA-binding subunit) (eIF3 p33)
           (Translation initiation factor eIF3, p33 subunit)
          Length = 274

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 462 YGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           +  I    ++ ++ETG+SRG  FVTF SEE
Sbjct: 215 FAPIPRVSVVRNKETGKSRGLAFVTFSSEE 244

---

>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+A F ++G I +  +I DR T +SRGF F+TF
Sbjct: 24  LKAVFGKHGPISEVLLIKDR-TSKSRGFAFITF 55

---

>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L AAF  +G+I D +I  D ET + RGF FV F
Sbjct: 22  LHAAFIPFGDITDIQIPLDYETEKHRGFAFVEF 54

---

>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L AAF  +G+I D +I  D ET + RGF FV F
Sbjct: 22  LHAAFIPFGDITDIQIPLDYETEKHRGFAFVEF 54

---

>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)|
          Length = 348

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F +YG I+   I+ D+ TG+ RG  FV F   E
Sbjct: 212 LDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKRE 248

---

>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG+I D  I  D+ + +S+GFGFV F
Sbjct: 35  LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67

---

>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3|
          Length = 486

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 87

---

>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F   G ++ A++I +R T RSRG+G+V F
Sbjct: 184 LKKEFEHIGGVIGARVIYERGTDRSRGYGYVDF 216



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F+++GE++  +I    ET + +GFG+V F + E
Sbjct: 287 FAKHGEVVSVRIPTHPETEQPKGFGYVQFSNME 319

---

>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2|
          Length = 558

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 87

---

>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1|
          Length = 744

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 388 SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 417



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 223 SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 252



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 87

---

>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1|
          Length = 861

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           FS YGE+ +  +  D  TG S+GF +V F   E
Sbjct: 345 FSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPE 377

---

>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4|
          Length = 579

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 223 SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 252



 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -2

Query: 477 AAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           + F +YG + + KII +R TG S+G+GFV+F
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSF 87

---

>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1|
          Length = 396

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKII-NDRETGRSRGFGFVTF 385
           L+  F Q+G+ILD +II N+R    S+GFGFVTF
Sbjct: 132 LRQMFGQFGKILDVEIIFNER---GSKGFGFVTF 162

---

>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)|
           (Hexaribonucleotide-binding protein 2) (Repressor of
           tamoxifen transcriptional activity)
          Length = 390

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKII-NDRETGRSRGFGFVTF 385
           L+  F Q+G+ILD +II N+R    S+GFGFVTF
Sbjct: 137 LRQMFGQFGKILDVEIIFNER---GSKGFGFVTF 167

---

>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1|
          Length = 397

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKII-NDRETGRSRGFGFVTF 385
           L+  F Q+G+ILD +II N+R    S+GFGFVTF
Sbjct: 133 LRQMFGQFGKILDVEIIFNER---GSKGFGFVTF 163

---

>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 220

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 12/37 (32%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L   F+Q+G++ + ++  +++TG SR +GF+ F ++E
Sbjct: 107 LSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKE 143

---

>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG + D  I  DR T  SRGF FV F
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 61

---

>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG + D  I  DR T  SRGF FV F
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 61

---

>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG + D  I  DR T  SRGF FV F
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 61

---

>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG + D  I  DR T  SRGF FV F
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 61

---

>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG + D  I  DR T  SRGF FV F
Sbjct: 30  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62

---

>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q G +++  +  DR TG+ +G+GFV F SEE
Sbjct: 33  FLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65



 Score = 33.1 bits (74), Expect = 0.40
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 483 LQAAFSQYGEILDA-KIINDRETGRSRGFGFVTFGS 379
           L   FS +G IL   KI+ D +TG S+G+ F+ F S
Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFAS 151

---

>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           FS YGE+ +  +  D  TG+S+GF +V F   E
Sbjct: 321 FSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPE 353

---

>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           FSQ+G +   ++   + TG S+G+ FV F SE+
Sbjct: 65  FSQFGTVTRFRLSRSKRTGNSKGYAFVEFESED 97

---

>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1|
          Length = 878

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FS YGE+ +  I  D  TG+S+GF +V F + ++
Sbjct: 350 FSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADN 383

---

>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2|
          Length = 383

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 462 YGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           YG+I+  K I D+ T + +G+GFV F S  S
Sbjct: 81  YGKIVSTKAILDKTTNKCKGYGFVDFDSPSS 111

---

>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 480 QAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           ++ FSQYG + +  I  D  TG+S+GF +V F  +E
Sbjct: 327 RSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKE 362

---

>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 483 LQAAFSQYGEILDA-KIINDRETGRSRGFGFVTFGSEES 370
           L   FS +G IL   KI+ D ++G S+GF F+ F S E+
Sbjct: 116 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEA 154



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 465 QYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           Q G ++   +  DR T   +GFGFV F  EE
Sbjct: 35  QAGPVVSVNMPKDRVTANHQGFGFVEFMGEE 65

---

>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B)
          Length = 931

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS+YG+++ AK++ +  +  +R +GFVT  + E
Sbjct: 444 LKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAE 480

---

>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -2

Query: 468 SQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           ++Y     AKI++D+ TG S+G+GFV F + +
Sbjct: 185 NRYASTSHAKIVHDQVTGMSKGYGFVKFTNSD 216

---

>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B) (HSP27 estrogen response element-TATA
           box-binding protein) (HSP27 ERE-TATA-binding protein)
          Length = 915

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS+YG+++ AK++ +  +  +R +GFVT  + E
Sbjct: 422 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAE 458

---

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 468 SQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           S+Y     AKI+ D +T  SRG+GFV F  E
Sbjct: 208 SRYNSCKSAKIMTDPQTNVSRGYGFVRFTDE 238

---

>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L   FS  G+++ A  +   E GRS+G+GFV++ S E+
Sbjct: 115 LYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFET 152

---

>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog|
          Length = 300

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           LQ  F ++GEI   +I+ D+ T +S+G+ F+ F
Sbjct: 123 LQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVF 155

---

>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           ++  F   G I+  +I+ D+ TG  +GFG+V F + +S+
Sbjct: 303 IEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSV 341

---

>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           LQ  F  +G I    +  D+ TG+S+GF F++F   E
Sbjct: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRE 291

---

>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           LQ  F  +G I    +  D+ TG+S+GF F++F   E
Sbjct: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRE 291

---

>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F +YG     K+I D  +G+S+GFGFV + + E+
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251

---

>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F +YG     K+I D  +G+S+GFGFV + + E+
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251

---

>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F +YG     K+I D  +G+S+GFGFV + + E+
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251

---

>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F +YG     K+I D  +G+S+GFGFV + + E+
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251

---

>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F +YG     K+I D  +G+S+GFGFV + + E+
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251

---

>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           L+  F +YG     K+I D  +G+S+GFGFV + + E+
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEA 251

---

>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3|
           RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3
           p33) (Translation initiation factor eIF3, p33 subunit)
          Length = 282

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F ++G I    +  D+ETGR++GF FV++
Sbjct: 218 LRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSY 250

---

>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2|
           (Suppressor of CDC2 with RNA-binding motif 3)
          Length = 407

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 462 YGEILDAKIINDRETGRSRGFGFVTFGS 379
           YG+I+  K I D+ T + +G+GFV F S
Sbjct: 79  YGKIVSTKAILDKTTNKCKGYGFVDFDS 106

---

>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 468 SQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           S  G +++ K++ D +TGRS+G+ F+ F   ES
Sbjct: 39  SNVGPVINLKMMFDPQTGRSKGYAFIEFRDLES 71

---

>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  F  YG I    +I+D+E+G+ +G+ F+ +  E  M
Sbjct: 118 LRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDM 156

---

>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1) (Suppressor
           of CDC2 with RNA-binding motif 2)
          Length = 406

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 462 YGEILDAKIINDRETGRSRGFGFVTFGS 379
           YG+I+  K I D+ T + +G+GFV F S
Sbjct: 85  YGKIVSTKAILDKTTNKCKGYGFVDFDS 112

---

>HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2 (Fragment)|
          Length = 225

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +GE+   ++  D +T + RGF F+TF  EE
Sbjct: 192 FGGFGEVESIELPMDNKTNKRRGFCFITFNQEE 224

---

>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2|
          Length = 953

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FS+YG+++ AK++ +  +  +R +GFVT  + +
Sbjct: 423 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSD 459

---

>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1)
          Length = 403

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 462 YGEILDAKIINDRETGRSRGFGFVTFGS 379
           YG+I+  K I D+ T + +G+GFV F S
Sbjct: 85  YGKIVSTKAILDKATNKCKGYGFVDFDS 112

---

>RNP24_SCHPO (Q09100) RNA-binding protein rnp24|
          Length = 369

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F Q G+I   +++   +TG+ +GFGFV F
Sbjct: 244 LKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDF 276

---

>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F + G I D +++ D  TG +RG+ FVTF ++E+
Sbjct: 92  FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 125

---

>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F + G I D +++ D  TG +RG+ FVTF ++E+
Sbjct: 182 FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 215

---

>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F + G I D +++ D  TG +RG+ FVTF ++E+
Sbjct: 182 FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEA 215

---

>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 11/37 (29%), Positives = 26/37 (70%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L++ FS++G+++ AK++ +  +  +R +GFVT  + +
Sbjct: 467 LKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSD 503

---

>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  FSQ+G +   ++   ++TG S+G+ +V F  +E
Sbjct: 57  LREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDE 93

---

>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS +G+I D  ++ D+ T  S+G  FV F
Sbjct: 41  LRERFSPFGDIQDIWVVRDKHTKESKGIAFVKF 73



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F  YG+I    II ++ TG S+G G+V +
Sbjct: 136 LREKFKVYGDIEYCSIIKNKVTGESKGLGYVRY 168

---

>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -2

Query: 468 SQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           S Y     AKII D  TG SR +GFV F SE+
Sbjct: 204 SIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEK 235

---

>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F+Q G +   K++ D ETG  +G+GF  F   E+
Sbjct: 27  FNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSET 60

---

>HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP|
           core protein C) (Fragment)
          Length = 158

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F  +GE+   ++  D +T + RGF F+TF  EE
Sbjct: 54  FGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 86

---

>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1|
          Length = 476

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS +G+I D  ++ D+ T  S+G  FV F
Sbjct: 41  LREHFSPFGDIQDIWVVRDKHTKESKGIAFVKF 73



 Score = 30.0 bits (66), Expect = 3.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F  YG+I    +I ++ TG S+G G+V +
Sbjct: 136 LREKFKVYGDIEYCSVIKNKVTGESKGLGYVRY 168

---

>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS +G+I D  ++ D+ T  S+G  FV F
Sbjct: 41  LRERFSPFGDIQDIWVVRDKHTKESKGVAFVKF 73



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F  YG+I    II ++ TG S+G G+V +
Sbjct: 136 LREKFKVYGDIEYCSIIKNKVTGESKGLGYVRY 168

---

>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           F Q+G +L+  +I D+ TG+ +G  FV + + +
Sbjct: 140 FEQHGNVLEVALIKDKRTGQQQGCCFVKYATSK 172



 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           ++  F Q+G + D  ++ D E  +SRG GFV + S+E+
Sbjct: 227 VEEIFLQFGHVEDVYLMRD-EYRQSRGCGFVKYSSKET 263

---

>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 278

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           LQ  F+Q+G +   ++   ++TG S+G+ +V +  +E
Sbjct: 57  LQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDE 93

---

>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (mNIFK)
          Length = 317

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 468 SQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           +Q+G+I   ++   + TG S+G+ FV F SE+
Sbjct: 68  AQFGDISRFRLSRSKRTGNSKGYAFVEFESED 99

---

>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 728

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS  G ++ A I+ D++ G+SRG G VTF
Sbjct: 218 LKEVFSMAGVVVRADILEDKD-GKSRGIGIVTF 249

---

>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein
           F41)
          Length = 486

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F  +G ++ AK+  D++T  S+ FGFV++ +  S
Sbjct: 421 FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVS 454

---

>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding
           protein) (EDEN-BP)
          Length = 486

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F  +G ++ AK+  D++T  S+ FGFV++ +  S
Sbjct: 421 FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVS 454

---

>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTF 385
           FS +GE+ +  +  D  TG+S+GF +V F
Sbjct: 365 FSPFGELEEVHVALDTRTGQSKGFAYVLF 393

---

>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FSQ G +    ++ ++ +   RGFG+VTF   E +
Sbjct: 19  LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDV 57



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F+Q+G +L+  I   +  G+ RGFGFV F
Sbjct: 129 LKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQF 160

---

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           L+ AFSQ+G I  A +I D + GRS G G V F S+
Sbjct: 379 LEEAFSQFGPIERAVVIVD-DRGRSTGKGIVEFASK 413

---

>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESM 367
           L+  FSQ G +    ++ ++ +   RGFG+VTF   E +
Sbjct: 19  LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDV 57

---

>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSE 376
           L+ AFSQ+G I  A +I D + GRS G G V F S+
Sbjct: 387 LEEAFSQFGPIERAVVIVD-DRGRSTGKGIVEFASK 421

---

>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3|
           subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding
           subunit) (eIF3g)
          Length = 256

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F + G ++   I  D+ TG  +GF FVTF S +
Sbjct: 192 LRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 228

---

>GPMA_PHOLL (Q7N6S0) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase|
           (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM)
           (BPG-dependent PGAM) (dPGM)
          Length = 250

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 383 PNVTNPNPRDLPVSRSLMILASRISPYW 466
           P   N  P +LPV+ SL     R+ PYW
Sbjct: 138 PRYANLKPEELPVTESLATTIERVIPYW 165

---

>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           F + G I D +++ D  +G++RG+ F+TF  +E+
Sbjct: 185 FEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEA 218

---

>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 300

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L  AF  +G+I D ++  D E+ R RGF F+ +   E
Sbjct: 22  LNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSE 58

---

>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)|
           (Increased sodium tolerance protein 3)
          Length = 148

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FS+YG  +D  +  D  TG S+GF ++ +  + S
Sbjct: 51  FSEYGVPVDVILSRDENTGESQGFAYLKYEDQRS 84

---

>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 729

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS  G ++ A I+ D++ G+SRG G VTF
Sbjct: 219 LKEVFSMAGVVVRADILEDKD-GKSRGIGTVTF 250

---

>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           FS +  I  A ++ D    RSRGFGFV+F  E+
Sbjct: 46  FSNFAPIKHAVVVKDTNK-RSRGFGFVSFAVED 77

---

>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4|
           protein)
          Length = 689

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  FS  G ++ A I+ D++ G+SRG G VTF
Sbjct: 179 LKEVFSMAGVVVRADILEDKD-GKSRGIGTVTF 210

---

>TRA2_DROME (P19018) Transformer-2 sex-determining protein|
          Length = 264

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTF 385
           F++YG I   +++ D +T RSRGF F+ F
Sbjct: 117 FNKYGPIERIQMVIDAQTQRSRGFCFIYF 145

---

>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor|
           50 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 416

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 105 DDRPTD*KIRHVVSSSRNTETTRARDQKHHRTGQ 206
           DDR  D + R   S SR+    R+RD++HHR  +
Sbjct: 4   DDRERDRERRRHRSRSRDRHRERSRDRRHHRNSR 37

---

>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 468 SQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           +++  +   +++ D  TG SR FGFV FG E+
Sbjct: 214 TRFKSVKTVRVMTDPLTGSSRCFGFVRFGDED 245

---

>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)|
          Length = 261

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG I+D  I  D  T R RGF +V F
Sbjct: 26  LRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58

---

>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 471 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEES 370
           FSQYGE+ +  +  + +TG+ +GF  V F   E+
Sbjct: 321 FSQYGELEEVHLPINTKTGQCKGFAHVQFEDPEN 354

---

>DAZ1_CAEEL (Q20870) DAZ protein 1|
          Length = 499

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 373
           L+  F ++  + D K++   + G+S+G+GF+TF +E+
Sbjct: 83  LREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETED 118

---

>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG I+D  +  D  T R RGF +V F
Sbjct: 26  LRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58

---

>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           L+  F +YG I+D  +  D  T R RGF +V F
Sbjct: 26  LRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58

---

>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 456 EILDAKIINDRETGRSRGFGFVTFGSEES 370
           +IL+ K   +R  G+S+GF  V  GSE S
Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136

---

>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6|
           (Cleavage and polyadenylation specificity factor 68 kDa
           subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor
           Im 68-kDa subunit) (Protein HPBRII-4/7)
          Length = 551

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 456 EILDAKIINDRETGRSRGFGFVTFGSEES 370
           +IL+ K   +R  G+S+GF  V  GSE S
Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136

---

>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 456 EILDAKIINDRETGRSRGFGFVTFGSEES 370
           +IL+ K   +R  G+S+GF  V  GSE S
Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136

---

>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)|
          Length = 165

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 483 LQAAFSQYGEILDAKIINDRETGRSRGFGFVTF 385
           +Q  F  YGEI +  +  DR TG S+G+  V +
Sbjct: 89  IQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEY 121

---

>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6|
          Length = 552

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 456 EILDAKIINDRETGRSRGFGFVTFGSEES 370
           +IL+ K   +R  G+S+GF  V  GSE S
Sbjct: 108 DILEIKFFENRANGQSKGFALVGVGSEAS 136

---

>K0256_MOUSE (Q6A098) Protein KIAA0256|
          Length = 1086

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 135 HVVSSSRNTETTRARDQKHHRTGQTHKHDSD*HTEDR*LADEDG 266
           H  SS R     + +D KH  + Q+H+  SD ++E     DEDG
Sbjct: 352 HSTSSERRQNLQKRQDNKHLNSTQSHR--SDPNSESLYFEDEDG 393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,055,984
Number of Sequences: 219361
Number of extensions: 856460
Number of successful extensions: 2724
Number of sequences better than 10.0: 265
Number of HSP's better than 10.0 without gapping: 2524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---