Clone Name | rbasd15i03 |
---|---|
Clone Library Name | barley_pub |
>RAD9B_MOUSE (Q6WBX7) Cell cycle checkpoint control protein RAD9B homolog (RAD9| homolog B) (mRAD9B) Length = 403 Score = 31.6 bits (70), Expect = 0.50 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -1 Query: 259 LWLCPLREGQTRRRCLSCHVVYNYLFFSXL 170 LWL P +G R SCH Y Y+ FS + Sbjct: 28 LWLDPSEKGLALRSVNSCHSTYGYVLFSSM 57
>RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B homolog (RAD9| homolog B) Length = 398 Score = 31.2 bits (69), Expect = 0.65 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -1 Query: 259 LWLCPLREGQTRRRCLSCHVVYNYLFFSXL 170 LWL P +G R SCH Y Y+ FS + Sbjct: 23 LWLDPSEKGLALRSVNSCHSTYGYVLFSSV 52
>SGBE_HAEIN (P44989) Probable sugar isomerase sgbE (EC 5.1.-.-)| Length = 231 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = +1 Query: 166 LTTKKRRGNYTLHDRRGIVVLFVLLSRGKATSTNTVVAVLRASRGPAVRYNAASSAL 336 +TTK+ +GNY L G V++ LSRG + + AVL S GP A++A+ Sbjct: 132 MTTKEIKGNYEL--ETGKVIVETFLSRG--IEPDNIPAVLVHSHGPFAWGKDANNAV 184
>TRYA_DROME (P04814) Trypsin alpha precursor (EC 3.4.21.4)| Length = 256 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +3 Query: 270 RSSCTASVTGTSSQIQRSXLCPGAAAASSCR 362 +S C +S G SQI+ + +C A+ +C+ Sbjct: 177 QSQCASSTYGYGSQIRNTMICAAASGKDACQ 207
>SYY_BUCAI (P57221) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 422 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +1 Query: 163 ALTTKKRRGNYTLHDRRGIVVLFVLLSRGK 252 ++ T+K R N+ H++ + F LLSRGK Sbjct: 385 SINTEKIRKNHIFHEKDKLFGKFTLLSRGK 414
>DPP6_HUMAN (P42658) Dipeptidyl aminopeptidase-like protein 6| (Dipeptidylpeptidase VI) (Dipeptidylpeptidase 6) (Dipeptidyl peptidase IV-like protein) (Dipeptidyl aminopeptidase-related protein) (DPPX) Length = 865 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 238 EGQTRRRCLSCHVVYNYLFFS 176 EG R+CLSC +V N +FS Sbjct: 520 EGNFNRQCLSCDLVENCTYFS 540
>TRYDG_DROME (P42276) Trypsin delta/gamma precursor (EC 3.4.21.4)| Length = 253 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +3 Query: 270 RSSCTASVTGTSSQIQRSXLCPGAAAASSCR 362 +S C +S G SQI+ + +C A+ +C+ Sbjct: 177 QSQCASSTYGYGSQIRSTMICAAASGKDACQ 207
>I28RA_MOUSE (Q8CGK5) Interleukin-28 receptor alpha chain precursor| (IL-28R-alpha) (IL-28RA) (Cytokine receptor family 2 member 12) (Cytokine receptor class-II member 12) (CRF2-12) (Interferon lambda receptor 1) (IFN-lambda R1) Length = 535 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 247 PLREGQTRRRCLSCHVVYNYL 185 PL++G +RR CLS VY + Sbjct: 184 PLQQGASRRHCLSARTVYTLI 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,423,468 Number of Sequences: 219361 Number of extensions: 636600 Number of successful extensions: 1526 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1469 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1526 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)