>CBX6_MOUSE (Q9DBY5) Chromobox protein homolog 6|
          Length = 414

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +1

Query: 157 SAKAHHLRRESQEAGE*VRQELPREQEADGGGPPIILARRPASEPP*EVHRDLHPREPRR 336
           SA  H L+++ +      R+ LPR  +  GG P +     P SE    ++R + PREP+R
Sbjct: 113 SAAVHRLKKDIRRCHRMSRRPLPRP-DPQGGSPGLRPPISPFSETVRIINRKVKPREPKR 171

>CBX6_HUMAN (O95503) Chromobox protein homolog 6|
          Length = 412

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +1

Query: 157 SAKAHHLRRESQEAGE*VRQELPREQEADGGGPPIILARRPASEPP*EVHRDLHPREPRR 336
           SA  H L+++ +      R+ LPR  +  GG P +     P SE    ++R + PREP+R
Sbjct: 113 SAAVHRLKKDIRRCHRMSRRPLPRP-DPQGGSPGLRPPISPFSETVRIINRKVKPREPKR 171

>MK15_RAT (Q9Z2A6) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 7)
          Length = 547

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +1

Query: 154 PSAKAHHLRR-----ESQEAGE*VRQELPREQEADGGGPPIILARRPASEPP*EVHRDLH 318
           PS    H+R       SQ A +   Q L R   A GGGP  + ARR  S  P E      
Sbjct: 441 PSGVKTHVRAVAPSLTSQAAAQAANQPLIRSDPARGGGPRAVGARRVPSRLPREAP---E 497

Query: 319 PREPRRM 339
           PR  RRM
Sbjct: 498 PRPGRRM 504

>CI066_HUMAN (Q5T8R8) Protein C9orf66|
          Length = 295

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 26/72 (36%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
 Frame = +1

Query: 196 AGE*VRQELPREQEA---------DGGGPPIILARRPASEPP*EVHRDLHPREPRRMGPA 348
           AGE VR   PR             D  GP    A RPA+ PP        PREP   G  
Sbjct: 31  AGEVVRGRDPRRLRTSRSTEILGEDLAGPSAGAAARPAAPPP-------QPREPGAPGLR 83

Query: 349 MGPVNPRYSSSG 384
             P   R  SSG
Sbjct: 84  RAPPRTRMDSSG 95

>RPOC2_SOYBN (Q8HVY3) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)|
           (PEP) (Plastid-encoded RNA polymerase beta'' subunit)
           (RNA polymerase beta'' subunit)
          Length = 1386

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 499 INGKRTIQVEPL*ALTPLP-RGDGWVPCRACTGPDPSH 609
           IN  +T+Q +P+   TP   R   W+ CR C G  P+H
Sbjct: 272 INRFKTLQTQPISIRTPFTCRNTSWI-CRLCYGQSPTH 308

>ATI2_HHV11 (P10230) Alpha trans-inducing factor 78 kDa protein|
          Length = 718

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +1

Query: 226 REQEADGGGPPIILARRPASEPP*EVHRDLHPREPRRMGPAMGPVNPR 369
           R + ADG GPP+  A  P +EPP          +P      MG V PR
Sbjct: 487 RRRRADGAGPPLPDANDPVAEPP------AAATQPATYYTHMGEVPPR 528

>MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 7)
          Length = 549

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 21/51 (41%), Positives = 23/51 (45%)
 Frame = +1

Query: 187 SQEAGE*VRQELPREQEADGGGPPIILARRPASEPP*EVHRDLHPREPRRM 339
           SQ   +   Q L R   A GGGP  + ARR  S  P E      PR  RRM
Sbjct: 459 SQAEAQAANQALIRSDPARGGGPRAVGARRVPSRLPREAP---EPRPGRRM 506


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,233,389
Number of Sequences: 219361
Number of extensions: 2036613
Number of successful extensions: 5457
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5454
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)