ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15h16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SOS1_MOUSE (Q62245) Son of sevenless homolog 1 (SOS-1) (mSOS-1) 29 3.9
2SOS1_HUMAN (Q07889) Son of sevenless homolog 1 (SOS-1) 29 3.9
3SRC64_DROME (P00528) Tyrosine-protein kinase Src64B (EC 2.7.10.2... 28 8.6
4YCR6_YEAST (P25353) Hypothetical protein YCR026C 28 8.6

>SOS1_MOUSE (Q62245) Son of sevenless homolog 1 (SOS-1) (mSOS-1)|
          Length = 1319

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 138  LSQIPRNFSFSDLTEDFSHSTEILENYGRSPFIPSETNNFSEST 7
            L Q PR  S+S + E  + ST    N  R+P  P   +  S +T
Sbjct: 1056 LQQEPRKISYSRIPESETESTASAPNSPRTPLTPPPASGTSSNT 1099



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>SOS1_HUMAN (Q07889) Son of sevenless homolog 1 (SOS-1)|
          Length = 1333

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 138  LSQIPRNFSFSDLTEDFSHSTEILENYGRSPFIPSETNNFSEST 7
            L Q PR  S+S + E  + ST    N  R+P  P   +  S +T
Sbjct: 1056 LQQEPRKISYSRIPESETESTASAPNSPRTPLTPPPASGASSTT 1099



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>SRC64_DROME (P00528) Tyrosine-protein kinase Src64B (EC 2.7.10.2) (Dsrc64)|
          Length = 552

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 159 DTSSYGFLSQIPRNFSFSDLTEDFSHSTEILENYGRSPFIPSETNNF 19
           D  SYG L  +   F++  +     HS E++EN  R   +P  TN++
Sbjct: 462 DVWSYGIL--LMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHY 506



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>YCR6_YEAST (P25353) Hypothetical protein YCR026C|
          Length = 742

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
 Frame = -1

Query: 201 ELNGQPLGDPILDMDTSSY--GFLSQIPRNFSFSDLTEDF---------------SHSTE 73
           + NGQP+   ++D +  S+  GF S++P    F  L                    HST 
Sbjct: 84  DANGQPIDTELVDENELSFGTGFHSKVPFKIIFRTLFGSLVFAIFLILMINIAKPHHSTR 143

Query: 72  ILENYGRSPFIP 37
           +L ++G   F P
Sbjct: 144 VLSHFGSPEFDP 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,454,447
Number of Sequences: 219361
Number of extensions: 373152
Number of successful extensions: 977
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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