ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Tripep... 33 0.82
2TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Trip... 33 1.1
3INSL5_PANTR (Q5CZK5) Insulin-like peptide INSL5 precursor (Insul... 33 1.1
4INSL5_HUMAN (Q9Y5Q6) Insulin-like peptide INSL5 precursor (Insul... 33 1.1
5MYO5B_HUMAN (Q9ULV0) Myosin-5B (Myosin Vb) 32 1.4

>TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10)|
            (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl
            aminopeptidase)
          Length = 1248

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -2

Query: 650  QAAIAIQCAWRQKLPRRELRKLRNDSCMERRKIGLTLCTDGCMDVDGRRRSKEYDGRRCG 471
            Q A+A+  A +   PR +   ++ND   ++  +   LC  GC   D    ++ +DG   G
Sbjct: 1088 QTALAVYIAMKTD-PRPDAATIKNDMDKQKSTLVDALCRKGCALADHLLHAQPHDGAAAG 1146

Query: 470  DA 465
            DA
Sbjct: 1147 DA 1148



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>TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10)|
            (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl
            aminopeptidase)
          Length = 1261

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -2

Query: 650  QAAIAIQCAWRQKLPRRELRKLRNDSCMERRKIGLTLCTDGCMDVDGRRRSKEYDGRRCG 471
            Q A+A+  A +   PR +   ++ND   ++  +   LC  GC   D    ++ +DG   G
Sbjct: 1101 QTALAVYIAMKTD-PRPDAATIKNDMDKQKSTLIDALCRKGCALADHLLHTQPHDGAAAG 1159

Query: 470  DA 465
            DA
Sbjct: 1160 DA 1161



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>INSL5_PANTR (Q5CZK5) Insulin-like peptide INSL5 precursor (Insulin-like peptide|
           5) [Contains: Insulin-like peptide INSL5 B chain;
           Insulin-like peptide INSL5 A chain]
          Length = 135

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 623 WRQKLPRRELRKLRNDSCMERRKIGLTLCTDGCMDVD 513
           W  ++P  EL K +  S M R+ +    CTDGC   D
Sbjct: 94  WGGQMPTEELWKSKKHSVMSRQDLQTLCCTDGCSMTD 130



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>INSL5_HUMAN (Q9Y5Q6) Insulin-like peptide INSL5 precursor (Insulin-like peptide|
           5) [Contains: Insulin-like peptide INSL5 B chain;
           Insulin-like peptide INSL5 A chain]
          Length = 135

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 623 WRQKLPRRELRKLRNDSCMERRKIGLTLCTDGCMDVD 513
           W  ++P  EL K +  S M R+ +    CTDGC   D
Sbjct: 94  WGGQMPTEELWKSKKHSVMSRQDLQTLCCTDGCSMTD 130



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>MYO5B_HUMAN (Q9ULV0) Myosin-5B (Myosin Vb)|
          Length = 1849

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 665 F*RYKQAAIAIQCAWRQKLPRRELRKLR 582
           F R + AAI IQCA+R    RREL+ LR
Sbjct: 880 FQRLRDAAIVIQCAFRMLKARRELKALR 907


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,540,325
Number of Sequences: 219361
Number of extensions: 1729406
Number of successful extensions: 3924
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3922
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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