ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15g21 |
|---|---|
| Clone Library Name | barley_pub |
>PLZ12_LUPPO (P16148) Protein PPLZ12| Length = 184 Score = 192 bits (487), Expect(2) = 2e-69 Identities = 92/116 (79%), Positives = 107/116 (92%) Frame = -1 Query: 531 QLASVYKGEAEKIHLVKKAEGEAEAKYLSGVGIAKQRQAITDGLRENILNFSHSVSGTSA 352 QLAS+YKGEAEKI VK+AE EAEAKYL GVG+A+QRQAITDGLRENILNFSH V GTSA Sbjct: 60 QLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSA 119 Query: 351 KEVMDLIMVTQYFDTIKELGDNSKTTTVFIPHGPGHVKDIGDQIRTGMMEASSSGL 184 KEVMDLIM+TQYFDTIK+LG++SK TTVFIPHGPGHV+DIG+QIR G+ME++ +G+ Sbjct: 120 KEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESARAGI 175 Score = 91.3 bits (225), Expect(2) = 2e-69 Identities = 44/53 (83%), Positives = 50/53 (94%) Frame = -3 Query: 691 FEQKNEVAKAVLEELEKVMSDYGYSIEHILMVDIIPDAAVRRAMNDINAAQRL 533 FEQK EVAK+VLEELEKVM +YGY+IEHILMVDIIPD +VRRAMN+INAAQR+ Sbjct: 7 FEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRM 59
>SY111_ARATH (Q42374) Syntaxin-related protein KNOLLE (Syntaxin-111) (AtSYP111)| Length = 310 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/76 (25%), Positives = 38/76 (50%) Frame = -1 Query: 528 LASVYKGEAEKIHLVKKAEGEAEAKYLSGVGIAKQRQAITDGLRENILNFSHSVSGTSAK 349 ++ + K ++ K L + + E K LSG + + R A+T+GLR+ + G K Sbjct: 97 VSGLRKAKSIKSKLEEMDKANKEIKRLSGTPVYRSRTAVTNGLRKKLKEVMMEFQGLRQK 156 Query: 348 EVMDLIMVTQYFDTIK 301 M+++Y +T++ Sbjct: 157 ------MMSEYKETVE 166
>DPOL_EBV (P03198) DNA polymerase (EC 2.7.7.7)| Length = 1015 Score = 32.0 bits (71), Expect = 1.8 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +1 Query: 283 RVVPELLDGVEVLGHHDQVHHLLGARARHRVREVED-VLPQA-VRDGLSLLGDADARQVL 456 R V L DG ++ + V + R R V D VL A V++ SLL ++ Sbjct: 809 RYVGVLTDGKTLMKGVELVRKTACKFVQTRCRRVLDLVLADARVKEAASLLSHRPFQESF 868 Query: 457 RLGLPFRFLHQVDLLRFSFVDTRE 528 GLP FL +D+L ++ D RE Sbjct: 869 TQGLPVGFLPVIDILNQAYTDLRE 892
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 7/53 (13%) Frame = -3 Query: 436 HRQAATGHHGRPAGEHPQLLA-------LGVGHERQGGDGPDHGDPVLRHHQG 299 HR HG P G P + G HE +G DGP HG R H G Sbjct: 846 HRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPHEHRGHDGPGHGGGGHRGHDG 898
>STML2_HUMAN (Q9UJZ1) Stomatin-like protein 2 (SLP-2) (EPB72-like 2)| Length = 356 Score = 30.0 bits (66), Expect = 6.9 Identities = 25/99 (25%), Positives = 41/99 (41%) Frame = -1 Query: 537 GFQLASVYKGEAEKIHLVKKAEGEAEAKYLSGVGIAKQRQAITDGLRENILNFSHSVSGT 358 G + A + EAEK + +A GEA A A+ + + L ++ +G Sbjct: 220 GKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQH--------NGD 271 Query: 357 SAKEVMDLIMVTQYFDTIKELGDNSKTTTVFIPHGPGHV 241 +A L + QY +L +S T+ +P PG V Sbjct: 272 AA---ASLTVAEQYVSAFSKLAKDS--NTILLPSNPGDV 305
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 8/54 (14%) Frame = -3 Query: 436 HRQAATGHHGRPAGEHPQLLALGVGH--------ERQGGDGPDHGDPVLRHHQG 299 HR HG P G P + GH E +G DGP HG R H G Sbjct: 830 HRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG 883
>KAD_OCEIH (Q8ETW3) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 215 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = -3 Query: 655 EELEKVMSDYGYSIEHILMVDIIPDAAVRR 566 EEL+ ++SD G SI++++ VD+ + V R Sbjct: 94 EELQNLLSDLGKSIDYVIHVDVPEEKLVER 123
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 8/54 (14%) Frame = -3 Query: 436 HRQAATGHHGRPAGEHPQLLALGVGH--------ERQGGDGPDHGDPVLRHHQG 299 HR HG P G P + GH E +G DGP HG R H G Sbjct: 845 HRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG 898
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 8/54 (14%) Frame = -3 Query: 436 HRQAATGHHGRPAGEHPQLLALGVGH--------ERQGGDGPDHGDPVLRHHQG 299 HR HG P G P + GH E +G DGP HG R H G Sbjct: 845 HRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDG 898
>DNAA_SILPO (Q5LWV4) Chromosomal replication initiator protein dnaA| Length = 468 Score = 29.6 bits (65), Expect = 9.1 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Frame = -1 Query: 402 LREN-ILNFSHSVSGTSAKEVMDLIMVT-------QYFDTIKELGDNSKTTTVFIPHGPG 247 LRE +++F H V D+ + ++F T L D +K + PG Sbjct: 210 LRERRMMDFKHLFRSVDVLMVDDVQFIAGKDSTQEEFFHTFNALVDQNKQIIISADRAPG 269 Query: 246 HVKDIGDQIRT 214 +KD+ D++++ Sbjct: 270 EIKDLEDRVKS 280 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,704,219 Number of Sequences: 219361 Number of extensions: 1751129 Number of successful extensions: 6139 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5865 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6135 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
