>JIP2_MOUSE (Q9ERE9) C-jun-amino-terminal kinase-interacting protein 2|
           (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase
           scaffold protein 2) (Islet-brain-2) (IB-2)
           (Mitogen-activated protein kinase 8-interacting protein
           2)
          Length = 830

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 498 QSPADRSLQDLPE*IPSLPCAMAR*PVTSAAALSCR-ERREPPRPHSCMGGRAPS 337
           +SPA   L++LP   P LP    R  V S A   C  E  +PP P +  GG +PS
Sbjct: 174 RSPAQEPLKELPA--PLLPAEEERHEVQSLARPGCDCEGNQPPEPPASSGGASPS 226

>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 33/95 (34%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
 Frame = +2

Query: 278 WGQLDAGPGWAAGPARLGPSEGA------RPPMHECGRGGSRLSRQESAAALVTGQRAMA 439
           WG  ++  GW AGP   GPS G       R P    GR G R+ RQ       T   A A
Sbjct: 408 WGGTESPRGWEAGPREWGPSPGGRGDGPRRRPRKRRGRKG-RMGRQLE----TTATSASA 462

Query: 440 QGRLGIHSGKSWRLRSAGDWD*RIRPRGADSRWRR 544
            G     +G S     AG    R R RG   + RR
Sbjct: 463 TGGPAEEAGASAPEGQAGGGP-RGRARGPRQQARR 496

>GP144_HUMAN (Q7Z7M1) Probable G-protein coupled receptor 144 (G-protein coupled|
           receptor PGR24)
          Length = 963

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +3

Query: 399 RAQQRWSRVNGPWRKAG*GFTPASLGDSGRLAIGIDGSDQGEPIPDGG 542
           RA  RW  V   W + G  +   +L   GR   G  G   G P+P GG
Sbjct: 203 RADGRWHHVCATWEQRGGRW---ALFSDGRRRAGARGLGAGHPVPSGG 247

>MAGI2_HUMAN (Q86UL8) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 2 (Membrane-associated
            guanylate kinase inverted 2) (MAGI-2)
            (Atrophin-1-interacting protein 1)
            (Atrophin-1-interacting protein A)
          Length = 1455

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +2

Query: 251  GKQRPRRLAWGQLDAGPGWAAGPARLGPSEGARPPMHECGRGGSR 385
            GK+ PR  A  +L    G  A PA  GP  G    +   GR G+R
Sbjct: 1365 GKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGAR 1409

>KCC2B_HUMAN (Q13554) Calcium/calmodulin-dependent protein kinase type II beta|
           chain (EC 2.7.11.17) (CaM-kinase II beta chain) (CaM
           kinase II beta subunit) (CaMK-II beta subunit)
          Length = 664

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 21/54 (38%), Positives = 24/54 (44%)
 Frame = +2

Query: 191 IPPQSPSILLFSPLLAGINRGKQRPRRLAWGQLDAGPGWAAGPARLGPSEGARP 352
           +P  SP I   S +L  + RG   P   A G L AGP     PA LGP     P
Sbjct: 442 LPAPSPRI---SDILNSVRRGSGTPE--AEGPLSAGPPPCLSPALLGPLSSPSP 490

>SFTPD_BOVIN (P35246) Pulmonary surfactant-associated protein D precursor (SP-D)|
           (PSP-D)
          Length = 369

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 296 GPGWAAGPARLGPSEGARPPMHECGRG--GSRLSRQESAAALVTGQRAMAQGRLGIHSGK 469
           GP  A GP   GPS    PP  +  RG  G R ++ ES  A V   R     R+GI  G+
Sbjct: 178 GPAGAIGPQ--GPSGARGPPGLKGDRGTPGERGAKGESGLAEVNALRQ----RVGILEGQ 231

Query: 470 SWRLRSA 490
             RL++A
Sbjct: 232 LQRLQNA 238

>ITM2C_MOUSE (Q91VK4) Integral membrane protein 2C (Transmembrane protein BRI3)|
           [Contains: CT-BRI3]
          Length = 269

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +2

Query: 221 FSPLLAGINRGKQRPRRLAWGQLDAGPGWAAGPAR---LGPSEGARPPMHECGRGGS 382
           F P +AGI   K      A     +GP  A+ PA    L P+   RPP H   +GGS
Sbjct: 6   FQPAVAGIKADK------ADKAAASGPASASAPAAEILLTPAREERPPRHRSRKGGS 56

>C78AB_ORYSA (Q7Y1V5) Cytochrome P450 78A11 (EC 1.14.-.-) (PLASTOCHRON1 protein)|
          Length = 555

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 272 LAWGQLDAGPGWAAGPARLG--PSEGAR 349
           LAW     GP WA G  RLG  P EG R
Sbjct: 51  LAWAASPGGPAWAHGRGRLGATPIEGPR 78

>ITM2C_RAT (Q5PQL7) Integral membrane protein 2C [Contains: CT-BRI3]|
          Length = 269

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +2

Query: 221 FSPLLAGINRGKQRPRRLAWGQLDAGPGWAAGPAR---LGPSEGARPPMHECGRGGS 382
           F P +AG+   K      A     +GP  A+ PA    L P+   RPP H   +GGS
Sbjct: 6   FQPAVAGVKAEK------ADKAAASGPASASAPAAEILLTPAREERPPRHRSRKGGS 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,580,702
Number of Sequences: 219361
Number of extensions: 2064812
Number of successful extensions: 6104
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6098
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)