>Y1068_METJA (Q58467) Hypothetical protein MJ1068|
          Length = 507

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 25/132 (18%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
 Frame = -3

Query: 400 LVGVFICLAIGCYLLQEHIRVSGGFREAFRKANGVSNT--IGIVLLFVYPVWVLVLWFL* 227
           ++ + I +A+G Y L   +         F+  N  S+T  + I+ +F++ +  + L+ + 
Sbjct: 129 VINILIIMAMGYYFLDSIVAFFSNILTGFQLQNYASSTRVVRILSVFIFSLIFIYLFNVH 188

Query: 226 DIYCYQCGH*LVCAVLFDVWGFIV*TFSMVIRYPESMNSARLYLLMDMFRFVVVLVSG-- 53
           + Y     + L+  V+  ++G+IV    +  ++ +        L+ ++F + + ++ G  
Sbjct: 189 NAYVPSVSYLLMAVVMIIIYGYIV-VKKIFPKFAKEKVIFSRKLIRNLFSYGMYVMIGYA 247

Query: 52  ----LCFLDXVC 29
               L +LD +C
Sbjct: 248 GSLILGYLDGIC 259

>ALG14_CANAL (Q5A5N6) UDP-N-acetylglucosamine transferase subunit ALG14 (EC|
           2.4.1.-) (Asparagine linked glycosylation protein 14)
          Length = 219

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/35 (45%), Positives = 26/35 (74%)
 Frame = -2

Query: 284 RHRPALRLPSLGPGAVVPVGHLLLSVWPLIGLCSS 180
           +HRPA+ L + GPG  VPV ++L  ++ L+GLC++
Sbjct: 138 KHRPAVILLN-GPGTCVPVAYILF-LYKLLGLCNT 170

>DISC_DROME (P23792) Protein disconnected|
          Length = 568

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 50  KT*HQNYNKSKHVHQKVQARRVHRLRIPNHHRKGLH 157
           KT HQ YN    + Q+ Q  + H L + +HH++  H
Sbjct: 497 KTQHQQYNHHHQLQQQHQQEQHHHLTLSHHHQEQHH 532

>CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)|
            (Microtubule-binding protein 190) (d-CLIP-190)
          Length = 1690

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 79   ETCPSEGTSAQSSSTPDTESPSKRSTR*IPKHRTELHK-PINGHTDSSRC 225
            E CP +G+  Q  STP +ES +    R +P  R       + GH D+S C
Sbjct: 1636 EDCPIQGSEDQDYSTPSSESNNNEKERKLPAPRKYCDSCEVFGH-DTSEC 1684

>SMC2_SCHPO (P41003) Structural maintenance of chromosome 2 (Chromosome|
           segregation protein cut14) (Cell untimely torn protein
           14)
          Length = 1172

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 311 PEGLPEAS*HPDVLLKQVAPDGEAYEDADEVVPEVVREEAG 433
           PE   + + HP V LK V  DG+ Y+ +  +    V + AG
Sbjct: 634 PESAKKVTFHPSVKLKSVTLDGDVYDPSGTLTGGSVNKSAG 674

>TNNT2_MOUSE (P50752) Troponin T, cardiac muscle (TnTc) (Cardiac muscle troponin|
           T) (cTnT)
          Length = 300

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
 Frame = +2

Query: 233 EPQHQDPDWVDEEQD------DADGVGYAIGLPEGLPEAS*HPDVLLKQVAPDGEAYEDA 394
           E + ++ DW +EE+D      + +  G A   PEG  E     +  +++V PD EA +DA
Sbjct: 11  EEEQEEEDWSEEEEDEQEEAVEEEEAGGAEPEPEGEAETE---EANVEEVGPDEEA-KDA 66

Query: 395 DE 400
           +E
Sbjct: 67  EE 68

>CRED_ECOLI (P08369) Inner membrane protein creD|
          Length = 450

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -2

Query: 344 QGVRRLQGGLQEGQWRIQHHRHRPALRLPSLGPGAVVPVGH----LLLSVWP 201
           QG + +   L EG WR Q+ +   AL L   G  +VVP G      L S WP
Sbjct: 176 QGGQGVHIPLPEGDWRKQNLKLNMALNLSGTGDLSVVPGGRNSEMTLTSNWP 227


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,287,751
Number of Sequences: 219361
Number of extensions: 2042797
Number of successful extensions: 6432
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6427
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)