Clone Name | rbasd14p19 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GLGB_RHOPA (Q6N3P9) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... | 31 | 2.8 | 2 | DHM1_METEX (P16027) Methanol dehydrogenase subunit 1 precursor (... | 31 | 3.7 | 3 | AMBN_HUMAN (Q9NP70) Ameloblastin precursor | 31 | 3.7 |
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>GLGB_RHOPA (Q6N3P9) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 716 Score = 31.2 bits (69), Expect = 2.8 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%) Frame = -2 Query: 623 GYWPSFLFSYLADSASMIEWGGEVVNSQAEGVHTSTQMGSGHFPEEGFGKSSYFKNIQVV 444 GY P+ L++ + S ++ V A G+ GHFP++ Sbjct: 293 GYQPTGLYAPTSRFGSPEDFCALVDACHAAGIGVILDWVPGHFPDD-------------- 338 Query: 443 DSTNNLKAPHGLGTFTEQSNCYDVQN---GNNGDWGTYFY-YG 327 PHGLG F + + Y+ N G + DWGT Y YG Sbjct: 339 --------PHGLGNF-DGTALYEHANPMQGRHLDWGTLIYNYG 372
>DHM1_METEX (P16027) Methanol dehydrogenase subunit 1 precursor (EC 1.1.99.8)| (MDH large alpha subunit) (MEDH) Length = 626 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 9/58 (15%) Frame = -2 Query: 431 NLKAPH----GLGTFTEQSNCYDVQNGNNGDW-----GTYFYYGGPGRSANCQ*SGRP 285 N+K PH GLGT T + + + + G N W GT Y G G A + RP Sbjct: 241 NIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRP 298
>AMBN_HUMAN (Q9NP70) Ameloblastin precursor| Length = 447 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = +1 Query: 205 WMDGWMVHHTTLPMVHTRSHSVTRVEGGLPDH-----WQLALRPGPP 330 WM G + H++LP + R H + E LP H Q +L+P P Sbjct: 75 WMHGLLPPHSSLPWMRPREHETQQYEYSLPVHPPPLPSQPSLKPQQP 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,022,472 Number of Sequences: 219361 Number of extensions: 1496479 Number of successful extensions: 4247 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4059 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4243 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)