ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd14p15 |
|---|---|
| Clone Library Name | barley_pub |
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 63.9 bits (154), Expect(3) = 3e-20 Identities = 30/44 (68%), Positives = 38/44 (86%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 +G FVD+DIE + +ISLRTL+DHS+VESFGGGGRTC+TA+ P Sbjct: 499 HGGFVDIDIE-KDRAISLRTLIDHSIVESFGGGGRTCMTARVYP 541 Score = 37.4 bits (85), Expect(3) = 3e-20 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = -1 Query: 480 VKVSSLDAWEMATATVNVLPDGLIA 406 VKVS L+AWE+ATA+VN DGLI+ Sbjct: 561 VKVSKLEAWELATASVNAGDDGLIS 585 Score = 37.0 bits (84), Expect(3) = 3e-20 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 VYP+HV G+SHLYVFNN Sbjct: 539 VYPEHVATGSSHLYVFNN 556
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 65.1 bits (157), Expect(3) = 3e-19 Identities = 32/44 (72%), Positives = 36/44 (81%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG FVDMDI+ +ISLRTL+DHSVVESFGGGGR CITA+ P Sbjct: 495 YGGFVDMDIDDHK-TISLRTLIDHSVVESFGGGGRACITARVYP 537 Score = 37.0 bits (84), Expect(3) = 3e-19 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP+HV +SHLYVFNNG Sbjct: 535 VYPEHVATSSSHLYVFNNG 553 Score = 32.3 bits (72), Expect(3) = 3e-19 Identities = 13/19 (68%), Positives = 18/19 (94%) Frame = -1 Query: 480 VKVSSLDAWEMATATVNVL 424 VKV+ L+AW++ATATVNV+ Sbjct: 557 VKVAKLEAWDLATATVNVV 575
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 62.4 bits (150), Expect(3) = 8e-18 Identities = 29/44 (65%), Positives = 36/44 (81%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG FVD+DI+ + SISLRTL+DHS++ESFGGGGR CIT + P Sbjct: 437 YGGFVDVDIQ-KDKSISLRTLIDHSMIESFGGGGRACITTRVYP 479 Score = 35.4 bits (80), Expect(3) = 8e-18 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP+H +SHLYVFNNG Sbjct: 477 VYPEHAATSSSHLYVFNNG 495 Score = 32.0 bits (71), Expect(3) = 8e-18 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -1 Query: 480 VKVSSLDAWEMATATVN 430 V VS L+AWEMATATVN Sbjct: 499 VNVSKLEAWEMATATVN 515
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 53.5 bits (127), Expect(3) = 2e-12 Identities = 26/44 (59%), Positives = 31/44 (70%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG F + D+E + ISLRTL+D S VESFGGGGR CI A+ P Sbjct: 508 YGGFFEYDLEKEK-KISLRTLIDRSAVESFGGGGRACIMARVYP 550 Score = 31.2 bits (69), Expect(3) = 2e-12 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP VV+G +H+Y FNNG Sbjct: 548 VYPAAVVDGATHMYAFNNG 566 Score = 26.2 bits (56), Expect(3) = 2e-12 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -1 Query: 480 VKVSSLDAWEMATATVNV 427 VKVS L AW M A VNV Sbjct: 570 VKVSQLKAWSMTRAQVNV 587
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 51.6 bits (122), Expect(3) = 2e-11 Identities = 25/44 (56%), Positives = 32/44 (72%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 + FVD+DI A+ I+LRTL+DHSVVESFG G+TCI + P Sbjct: 505 FAGFVDVDI-AKNKQIALRTLIDHSVVESFGARGKTCILTRVYP 547 Score = 28.9 bits (63), Expect(3) = 2e-11 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP V ++HL+VFNNG Sbjct: 545 VYPRKAVGDDAHLFVFNNG 563 Score = 27.3 bits (59), Expect(3) = 2e-11 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -1 Query: 480 VKVSSLDAWEMATATVN 430 VKV++LDAWEM T +N Sbjct: 567 VKVTNLDAWEMKTPKMN 583
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 52.0 bits (123), Expect(3) = 2e-10 Identities = 25/44 (56%), Positives = 32/44 (72%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 + FVD DI + G ISLR+L+D SVVESFG GG+TCI ++ P Sbjct: 498 FAGFVDTDISS--GKISLRSLIDRSVVESFGAGGKTCILSRVYP 539 Score = 30.0 bits (66), Expect(3) = 2e-10 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP + +HLYVFNNG Sbjct: 537 VYPSMAIGDKAHLYVFNNG 555 Score = 21.9 bits (45), Expect(3) = 2e-10 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -1 Query: 480 VKVSSLDAWEMATATVN 430 +K+S L AWEM +N Sbjct: 559 IKISHLKAWEMKKPLMN 575
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 50.8 bits (120), Expect(2) = 3e-09 Identities = 24/44 (54%), Positives = 32/44 (72%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 + FVD DI + G I+LR+L+D SVVESFG GG+TCI ++ P Sbjct: 511 FAGFVDADISS--GKITLRSLIDRSVVESFGAGGKTCILSRVYP 552 Score = 30.0 bits (66), Expect(2) = 3e-09 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP V ++HLYVFNNG Sbjct: 550 VYPSIAVGKDAHLYVFNNG 568
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 49.3 bits (116), Expect(3) = 5e-09 Identities = 24/44 (54%), Positives = 30/44 (68%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 + FVD DI G ISLR+L+D SVVESFG GG+ CI ++ P Sbjct: 518 FAGFVDTDIT--NGKISLRSLIDRSVVESFGAGGKACILSRVYP 559 Score = 28.5 bits (62), Expect(3) = 5e-09 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP + N+ LYVFNNG Sbjct: 557 VYPSLAIGKNARLYVFNNG 575 Score = 21.6 bits (44), Expect(3) = 5e-09 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 480 VKVSSLDAWEM 448 +KVS L AWEM Sbjct: 579 IKVSQLTAWEM 589
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 51.2 bits (121), Expect(2) = 7e-09 Identities = 24/45 (53%), Positives = 34/45 (75%) Frame = -2 Query: 674 PYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 P+ +VD+D+ + ISLR+L+D+SVVESFG GRTCIT++ P Sbjct: 511 PFAGYVDVDLSDK--KISLRSLIDNSVVESFGAHGRTCITSRVYP 553 Score = 28.5 bits (62), Expect(2) = 7e-09 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP + N+H++VFNNG Sbjct: 551 VYPKIAIYNNAHVFVFNNG 569
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 47.8 bits (112), Expect(2) = 1e-08 Identities = 23/44 (52%), Positives = 33/44 (75%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 + FVD+D+ A ISLR+L+D+SVVESFG G+TCI+++ P Sbjct: 513 FAGFVDVDL-ATDKKISLRSLIDNSVVESFGAKGKTCISSRVYP 555 Score = 30.8 bits (68), Expect(2) = 1e-08 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP V N+HLYVFNNG Sbjct: 553 VYPTLAVYENAHLYVFNNG 571
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/44 (61%), Positives = 33/44 (75%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG FVD+D + +SLRTL+DHSVVESFGG GR C+TA+ P Sbjct: 498 YGTFVDVDPLHE--KLSLRTLIDHSVVESFGGEGRACVTARVYP 539
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 48.5 bits (114), Expect(2) = 1e-06 Identities = 24/44 (54%), Positives = 31/44 (70%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG+ V + +G +SLR LVDHS+VESF GGRTCIT++ P Sbjct: 555 YGSVVPV---LEGEKLSLRILVDHSIVESFAQGGRTCITSRVYP 595 Score = 23.5 bits (49), Expect(2) = 1e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 VYP + G + L++FNN Sbjct: 593 VYPTRAIYGAARLFLFNN 610
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 46.6 bits (109), Expect(2) = 6e-06 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -2 Query: 638 QGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 +G SLR LVDHS+VESF GGRTC+T++ P Sbjct: 573 EGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYP 605 Score = 23.1 bits (48), Expect(2) = 6e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 VYP + G + L++FNN Sbjct: 603 VYPTKAIYGAARLFLFNN 620
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 46.2 bits (108), Expect(2) = 7e-06 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -2 Query: 638 QGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 +G SLR LVDHS+VESF GGRTC+T++ P Sbjct: 571 KGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYP 603 Score = 23.1 bits (48), Expect(2) = 7e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 VYP + G + L++FNN Sbjct: 601 VYPTKAIYGAARLFLFNN 618
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 47.4 bits (111), Expect(2) = 2e-05 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG+ V + G ++S+R LVDHS+VESF GGRTCIT++ P Sbjct: 584 YGSLVPV---LDGENLSVRILVDHSIVESFAQGGRTCITSRVYP 624 Score = 20.8 bits (42), Expect(2) = 2e-05 Identities = 6/18 (33%), Positives = 12/18 (66%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 VYP + ++ +++FNN Sbjct: 622 VYPTRAIYDSARVFLFNN 639
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 40.4 bits (93), Expect(2) = 2e-05 Identities = 22/44 (50%), Positives = 28/44 (63%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG+ V + G S+R LVDHS+VESF GGRT IT++ P Sbjct: 553 YGSSVPV---LDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYP 593 Score = 27.3 bits (59), Expect(2) = 2e-05 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 +YP VNG + L+VFNN Sbjct: 591 IYPTKAVNGAARLFVFNN 608
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 37.4 bits (85), Expect(2) = 3e-05 Identities = 19/44 (43%), Positives = 30/44 (68%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 + FVD+D+ + ISLR+L+D+SVVESFG + I+++ P Sbjct: 505 FRGFVDVDLSDK--KISLRSLIDNSVVESFGAQRKNLISSRVYP 546 Score = 29.6 bits (65), Expect(2) = 3e-05 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNNG 491 VYP + N+HL+VFNNG Sbjct: 544 VYPTLAIYNNAHLFVFNNG 562
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 38.5 bits (88), Expect(2) = 7e-05 Identities = 21/44 (47%), Positives = 27/44 (61%) Frame = -2 Query: 671 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 YG+ V + G +R LVDHS+VESF GGRT IT++ P Sbjct: 557 YGSSVPV---LDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYP 597 Score = 27.3 bits (59), Expect(2) = 7e-05 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 547 VYPDHVVNGNSHLYVFNN 494 +YP VNG + L+VFNN Sbjct: 595 IYPTKAVNGAARLFVFNN 612
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = -2 Query: 635 GGSISLRTLVDHSVVESFGGGGRTCITAKGVP 540 G S+S+R LVDHS+VESF GGRT IT++ P Sbjct: 587 GESLSMRLLVDHSIVESFAQGGRTVITSRVYP 618
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 31.6 bits (70), Expect = 2.3 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 574 PPPKLSTTEWSTSVLSEMLPPCASMSMSTKAPY 672 PPP ST+ +ST + M+P +S + +T +PY Sbjct: 190 PPPASSTSSFSTITNTSMIPSSSSFTTTTGSPY 222
>INVO_TARBA (P24711) Involucrin| Length = 387 Score = 30.0 bits (66), Expect = 6.7 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +1 Query: 283 PEPQLGRQIQSAVE--IHNGHPSTERKPSSRILIGLSSAHRARRDQPVGEHVH-GRRRHL 453 PE QLGR+ Q E +H G ++KP + AH ++ +P G+ VH G+++ Sbjct: 78 PELQLGRKQQEPQEQEVHPG--KQQQKPQEQ------EAHLGKKQEPQGQEVHLGKQQQK 129 Query: 454 PRVEAGHL 477 + + HL Sbjct: 130 TQEQEVHL 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,901,869 Number of Sequences: 219361 Number of extensions: 1886311 Number of successful extensions: 4904 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4898 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
