ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14p10 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 227 bits (578), Expect = 2e-59 Identities = 106/123 (86%), Positives = 114/123 (92%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 VKV GA+HKGMPHKFYHGRT R+WNVTKRA+GVE+NKQ+GNRIIRKRIHVRVEHVQ SRC Sbjct: 42 VKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRC 101 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIPYDVVNDLK 204 AEEF+LRK KND+LKA AKA GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLK Sbjct: 102 AEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLK 161 Query: 203 GGY 195 GGY Sbjct: 162 GGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 120 bits (302), Expect = 2e-27 Identities = 64/112 (57%), Positives = 82/112 (73%), Gaps = 3/112 (2%) Frame = -1 Query: 548 AVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 369 AVHKGMP K+YHGRT VWNVTKRAIGVEINK+V +RII+KRIHVR++HV+ S C + F Sbjct: 47 AVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFL 106 Query: 368 LRKVKNDQLKAEAK-ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 R +ND++K +A A+ V STKR P+ PK G ++ +G ET IPY+ Sbjct: 107 KRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 118 bits (296), Expect = 1e-26 Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G++ KGMPHKFY G+T V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C Sbjct: 42 IKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKC 101 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 +EF R N +AEAKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 102 RQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 118 bits (296), Expect = 1e-26 Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G++ KGMPHKFY G+T V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C Sbjct: 42 IKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKC 101 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 +EF R N +AEAKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 102 RQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 112 bits (281), Expect = 6e-25 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G V KGMPHK YHG+T RV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ Sbjct: 41 IKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKS 100 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 + F R +NDQ K EAK +G + KRQP P+ V G E + PIPY+ Sbjct: 101 RDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 112 bits (281), Expect = 6e-25 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G V KGMPHK YHG+T RV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ Sbjct: 41 IKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKS 100 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 + F R +NDQ K EAK +G + KRQP P+ V G E + PIPY+ Sbjct: 101 RDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 111 bits (278), Expect = 1e-24 Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +KV GAV KGMPHK+YHG+T V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C Sbjct: 42 IKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKC 101 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 222 ++F R N+ + EAKA+G+ + +RQP P V E VT P+ YD Sbjct: 102 RQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 111 bits (278), Expect = 1e-24 Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +KV GAV KGMPHK+YHG+T V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C Sbjct: 42 IKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKC 101 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 222 ++F R N+ + EAKA+G+ + +RQP P V E VT P+ YD Sbjct: 102 RQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 107 bits (268), Expect = 2e-23 Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G V KGMPHK YHG+T RV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ Sbjct: 41 IKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKS 100 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 + F R +NDQ K EAK +G + QP P+ V G E + PIPY+ Sbjct: 101 RDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 107 bits (267), Expect = 2e-23 Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 2/116 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G V KGMPHK YHG+T RV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ Sbjct: 41 IKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKS 100 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 222 + F R +NDQ K EAK +G + KR P+ V G E + PIPY+ Sbjct: 101 RDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 99.4 bits (246), Expect = 6e-21 Identities = 48/119 (40%), Positives = 77/119 (64%), Gaps = 3/119 (2%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K GA KGMP K YHGRT R++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C Sbjct: 41 IKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKC 100 Query: 383 AEEFRLRKVKNDQLKAEAKARGE-VISTKRQPLGPKPGFMV--EGTTIETVTPIPYDVV 216 +F R ND+ + AK+ G+ V + KR P+ P+ V + E + P+ +++V Sbjct: 101 RTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 99.4 bits (246), Expect = 6e-21 Identities = 50/115 (43%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 +K G+V K PHK YHG+T R++NVT+ A+G+ +NKQV RII KRI+VR+EH++ S+ Sbjct: 40 IKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKS 99 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTT-IETVTPIPYD 222 F R +N++ + EA+ + ++ KRQP P+ G V + E V PIPY+ Sbjct: 100 RISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 93.2 bits (230), Expect = 5e-19 Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 9/118 (7%) Frame = -1 Query: 548 AVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 369 ++ G+P+K +HG+T RVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F Sbjct: 47 SIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFL 106 Query: 368 LRKV-------KNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIE--TVTPIPYD 222 RK +N QLK E K + KR P P+P +++G I+ TV P+ ++ Sbjct: 107 ERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 82.4 bits (202), Expect = 8e-16 Identities = 41/96 (42%), Positives = 68/96 (70%), Gaps = 1/96 (1%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 + V A+ KGMPHK+YHGRT RV++V R++ V + K+V + + K+I VR+EHV+ SRC Sbjct: 41 ILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRC 100 Query: 383 AEEFRLRKVKNDQLKAEAKARGEVIS-TKRQPLGPK 279 +EE + R + ++ +A++RG V++ +KR+ GP+ Sbjct: 101 SEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/57 (38%), Positives = 34/57 (59%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 393 VK+ ++HKGMPH+ YHG+ V V KR E+ +G++ + + VR EH+ P Sbjct: 44 VKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 38.1 bits (87), Expect = 0.017 Identities = 24/62 (38%), Positives = 33/62 (53%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRC 384 + + +VHKGMPH YHGRT V RA V+I G + K++ V EH++P Sbjct: 43 IVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQ 98 Query: 383 AE 378 E Sbjct: 99 PE 100
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 36.6 bits (83), Expect = 0.050 Identities = 20/57 (35%), Positives = 34/57 (59%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 393 VK+ +VH+GMPH+ Y G+ ++ + KR ++ +G++ K I VR EH+ P Sbjct: 44 VKINPSVHQGMPHRRYQGKVGKI--IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 399 +K+ +VHKGMPH+ YHG+ + KR + +G++ K I VR EH+ Sbjct: 44 IKINPSVHKGMPHRRYHGKVGVIQG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 33.9 bits (76), Expect = 0.33 Identities = 18/51 (35%), Positives = 31/51 (60%) Frame = -1 Query: 548 AVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 396 ++H+G PH +HG+T RV + ++ V + GN+ K++ VR EH+Q Sbjct: 47 SIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 33.1 bits (74), Expect = 0.56 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPS 390 + + +VHKGMPH +HGRT V RA V++ G + K+I +H++P+ Sbjct: 43 IVIDPSVHKGMPHPRFHGRTGIVVGKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 32.7 bits (73), Expect = 0.73 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRT 504 +K G V KG+PHK YHG+T Sbjct: 41 IKGMGTVQKGLPHKCYHGKT 60
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 32.3 bits (72), Expect = 0.95 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = -1 Query: 536 GMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 369 GMPH+ +HG T V V KR E+ +G + RK + V H++P A E R Sbjct: 54 GMPHRRFHGLTGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 387 + + + HKGMP +HGRT V V KR + GN++ K + + H++P + Sbjct: 43 IVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 387 + + + HKGMP +HGRT V V KR + GN++ K + + H++P + Sbjct: 43 IVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 443 NRIIRKRIHVRVEHVQPSRCAEEFRLR 363 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 393 + + A KGMPH + GRT V RA V++ G ++ K + VR EH++P Sbjct: 42 IDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 4.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 304 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 197 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -1 Query: 563 VKVXGAVHKGMPHKFYHGRTVRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 387 + + + HKGMP +HGRT V V KR + + G+++ K + + H++P + Sbjct: 43 IVIEPSYHKGMPDPRFHGRTGTV--VGKRGEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 407 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 228 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 227 YDVVNDLKGGY 195 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 407 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 228 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 227 YDVVNDLKGGY 195 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 407 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 228 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 227 YDVVNDLKGGY 195 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -1 Query: 407 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 228 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 227 YDVVNDLKGGY 195 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 334 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 459 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,629,122 Number of Sequences: 219361 Number of extensions: 1673357 Number of successful extensions: 4794 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4794 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
