>SSK2_YEAST (P53599) MAP kinase kinase kinase SSK2 (EC 2.7.11.25) (Suppressor of|
            sensor kinase 2)
          Length = 1579

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 507  VAVDPSTGGTTKGRVRDLQSWNMGCFVIWEL*MIRPW 397
            +A +  TG TTKG++     W++GC V+  +   RPW
Sbjct: 1464 MAPESITGSTTKGKLGADDVWSLGCVVLEMITGRRPW 1500

>YGFA_ECOLI (P0AC28) Hypothetical protein ygfA|
          Length = 182

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 403 TMVVTTVHDKQLVDDIPVEKLLIHDVPVDIICTPTQV 293
           T  V   HD QLV+ +PVE+    D+P+  + TP++V
Sbjct: 146 TQPVGYAHDCQLVEKLPVEE---WDIPLPAVVTPSKV 179

>YGFA_ECO57 (P0AC29) Hypothetical protein ygfA|
          Length = 182

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 403 TMVVTTVHDKQLVDDIPVEKLLIHDVPVDIICTPTQV 293
           T  V   HD QLV+ +PVE+    D+P+  + TP++V
Sbjct: 146 TQPVGYAHDCQLVEKLPVEE---WDIPLPAVVTPSKV 179

>TLR9_FELCA (Q5I2M7) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1031

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +1

Query: 337 LAAFQLECHPLIACHVQLLLPWSNHL*LPYNEASHIPALQIPHPSLS 477
           L+     CH  I  H  L +P    L L YN  + +PAL     SLS
Sbjct: 103 LSPMHFPCHMTIEPHTFLAVPTLEELNLSYNSITTVPALPSSLVSLS 149


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,062,584
Number of Sequences: 219361
Number of extensions: 1682640
Number of successful extensions: 3927
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3926
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)