>VU84_HHV6Z (P52533) Protein U84|
          Length = 342

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = -1

Query: 566 SKPSPKRTSNLTRKT----NGYRSNGNSNGLMTPTPRRSSLGSATPELSTP----KSYSS 411
           +KPS +R  N+T KT    N  ++N +S  + T  P  S+   A P+ ++P         
Sbjct: 25  TKPSTERKKNVTTKTTIRNNRLQNNLSSQTVQTDKPVDSATARAFPQHTSPDIKFNKEKY 84

Query: 410 RYNRYFGDSRRLSVSQLNFGDD 345
           R N  +  S+   +S   F  D
Sbjct: 85  RNNAIYAHSKLRKISNAVFHQD 106

>LOLA3_DROME (Q7KQZ4) Longitudinals lacking protein, isoforms A/B/C/L|
          Length = 787

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 20/78 (25%), Positives = 35/78 (44%)
 Frame = -1

Query: 566 SKPSPKRTSNLTRKTNGYRSNGNSNGLMTPTPRRSSLGSATPELSTPKSYSSRYNRYFGD 387
           S+P    T   T  ++ + SNGN +G  T T     L   T E +T     +   +    
Sbjct: 525 SEPRAASTPARTHSSSNHSSNGNGSGKPTKTSSGGKLNHLTEEEATALMLKAVAEK---Q 581

Query: 386 SRRLSVSQLNFGDDSLST 333
           +   + ++L+FG+D  S+
Sbjct: 582 AAAAAGTELSFGEDQASS 599

>RUNT_DROME (P22814) Segmentation protein Runt|
          Length = 510

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -1

Query: 590 AEKEAIFGSKPSPKRTSNLTRKTNGYRSNGNSNGLMTPTPRRSSLGSATPELSTPKSYSS 411
           A   A     P P+++SN T   +    N   +   T T   SS GS+TP+LST  + SS
Sbjct: 25  AAAAAAVAQGPGPQQSSNATT-ASAIAINPAQSLANTSTHSASSTGSSTPDLSTNNTSSS 83

>FOXE2_HUMAN (Q99526) Forkhead box protein E2 (HNF-3/fork head-like protein 5)|
           (HFKL5) (HFKH4)
          Length = 500

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = -1

Query: 524 TNGYRSNGNSNGLMTPTPRRSSLGSATPELSTPKSYSSRYNRYFGDSRRL 375
           TNGY+    S G + PTP  ++   A P+ STP+    +  RYF D+ R+
Sbjct: 395 TNGYQPRQASPGPVRPTPSYAA-AYAGPDGSTPR---EKAVRYFADAGRV 440

>VP5_IPNVS (Q6U2P6) Protein VP5|
          Length = 133

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +2

Query: 386 NLQSIYYSDWNMIWVSKAQGWHCLGMTDEVLGSLVHYCSHLNGTRLSFWLSCSFSLGLVW 565
           NL  I+Y+  +  W SK  G H  G T      LV     L G R+  W SC F  G   
Sbjct: 11  NLPEIHYASRD--WTSKHPGRHN-GETHLKTRDLV---IQLRGLRIRKWHSCLFPWGTRL 64

Query: 566 SQKSLLSLQ-----AGCSPISSD 619
           + +  L ++     AG  P++ D
Sbjct: 65  TDRCTLQMECEPDGAGVRPVAGD 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,361,384
Number of Sequences: 219361
Number of extensions: 1809253
Number of successful extensions: 5875
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5822
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)