ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14o24 |
|---|---|
| Clone Library Name | barley_pub |
>AGTR1_SHEEP (O77590) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPVGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTR1_PIG (P30555) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPVGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTR1_CANFA (P43240) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTR1_BOVIN (P25104) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPVGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>TMM83_HUMAN (Q96N35) Transmembrane protein 83| Length = 136 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/92 (26%), Positives = 43/92 (46%) Frame = +2 Query: 209 HHLHMHSTTTHIYRLLGPTRFTHCLSYLAEISSIVSMSLAFRIKLSRWLRFSSQLSSNLA 388 HH + HI+ LL + LS + S+SL + L L S +S +L+ Sbjct: 8 HHSAIPEDFLHIFLLLQKISVSLPLSLSQSVCLFYSISLCVSLLLHISLCVSVYVSLSLS 67 Query: 389 SFTFSWCRSI*NISLHVYISRNRTIISWN*CF 484 SF C S+ + H +S++ +++++ CF Sbjct: 68 SFP---CFSLTHTHTHSQLSKDTSVLTFTFCF 96
>AGTR1_RABIT (P34976) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 31.6 bits (70), Expect = 2.2 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTR1_PANTR (Q9GLN9) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 31.6 bits (70), Expect = 2.2 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTR1_HUMAN (P30556) Type-1 angiotensin II receptor (AT1) (AT1AR) (AT1BR)| Length = 359 Score = 31.6 bits (70), Expect = 2.2 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTRA_RAT (P25095) Type-1A angiotensin II receptor (AT1) (AT1A)| Length = 359 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLMAGLASLPAVIHRNVYFIENTNITVCAFHYESRNSTLPIGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTRA_MOUSE (P29754) Type-1A angiotensin II receptor (AT1) (AT1A)| Length = 359 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLMAGLASLPAVIHRNVYFIENTNITVCAFHYESRNSTLPIGLGLTKNILGFLF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>AGTR1_CAVPO (Q9WV26) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + + Sbjct: 148 TCVII-WLMAGLASLPAVIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFMF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>GLNE_VIBVU (Q8DEH6) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 950 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = +3 Query: 243 YTGCWALQDSLTASLILLKSVPLSVCPWHFESSCPDGFGLAVNSVATLLPSLLVGAG 413 +T W+L++SL+ L +++ W ++ C + +G N+ P L++G G Sbjct: 109 FTQAWSLEESLSHLSELAEAMIFETYQWQYQLCCKE-WGTPTNAQGEAQPMLIIGMG 164
>NAPH_HAEIN (P44653) Ferredoxin-type protein napH homolog| Length = 287 Score = 30.8 bits (68), Expect = 3.7 Identities = 27/87 (31%), Positives = 36/87 (41%) Frame = +3 Query: 186 LVWCHLSSTIFTCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFESSCPDGFGLA 365 L W LS L Y G W L+ + + SL LL ++PLS D A Sbjct: 25 LFWRRLSQLSILAMFLSGPYFGVWILKGNYSGSL-LLDTIPLS-----------DPLITA 72 Query: 366 VNSVATLLPSLLVGAGASETFLFTSIL 446 + A LP L GA+ LF ++L Sbjct: 73 ESLAARHLPDALTLIGAAIIVLFYAVL 99
>MOB1_YEAST (P40484) Maintenance of ploidy protein MOB1 (MPS1 binder 1)| Length = 236 Score = 30.4 bits (67), Expect = 4.8 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = -3 Query: 231 VECM*RWCCSNDTRRDHELLFSSLLTSVV--GVVDRCNPSLIQNSLLTPARVMCHVCTYT 58 VEC+ RWC + D E LF S +T G + R +++ A + CH Sbjct: 136 VECLMRWC---QDQFDDESLFPSKVTGTFPEGFIQRVIQPILRRLFRVYAHIYCHHFNEI 192 Query: 57 PETQLRHVSN 28 E L+ V N Sbjct: 193 LELNLQTVLN 202
>AGTRB_RAT (P29089) Type-1B angiotensin II receptor (AT1B) (AT3)| Length = 359 Score = 30.0 bits (66), Expect = 6.3 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 219 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 389 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + + Sbjct: 148 TCIII-WLMAGLASLPAVIYRNVYFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFVF 206 Query: 390 PSLLV 404 P L++ Sbjct: 207 PFLII 211
>GLNE_VIBVY (Q7MNY4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 950 Score = 29.6 bits (65), Expect = 8.2 Identities = 14/57 (24%), Positives = 28/57 (49%) Frame = +3 Query: 243 YTGCWALQDSLTASLILLKSVPLSVCPWHFESSCPDGFGLAVNSVATLLPSLLVGAG 413 +T W+L+ SL+ L +++ W ++ C + +G N+ P L++G G Sbjct: 109 FTQAWSLEASLSHLSELAEAMIFETYQWQYQLCCQE-WGTPTNAQGEAQPMLIIGMG 164
>NR1D2_RAT (Q63504) Orphan nuclear receptor NR1D2 (Rev-erb-beta) (EAR4)| Length = 578 Score = 29.6 bits (65), Expect = 8.2 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = -2 Query: 466 NDGSVSANIDVKRNVSDAPAPTKSEGSKVATELTAKPKPSGQLDSKCQGH-TDNGTDFSK 290 N G V A I + S +PA SEGS+ + + ++ PS S C + TD S Sbjct: 4 NAGGVIAYISSSSSAS-SPASCHSEGSENSFQSSSSSVPSSPNSSNCDANGNPKNTDVSS 62 Query: 289 IREAVSESCRAQQPV 245 I + V +S R PV Sbjct: 63 I-DGVLKSDRTDCPV 76
>GSHB_MACFA (Q8HXX5) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase)| (GSH synthetase) (GSH-S) Length = 474 Score = 29.6 bits (65), Expect = 8.2 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = -2 Query: 631 TDLDPRNSCVDPCAAEMEETQCVKSYSA-AVHMSHKWVPIGKKDIAHLVVEASVPANDGS 455 T+ +P +C+ + + QC+ V++ H+ + K + HL+ ++ DG Sbjct: 401 TEPEPFENCLLRPGSPAQVVQCISELGIFGVYVRHEKTLVMNKHVGHLLRTKAIEHADGG 460 Query: 454 VSANIDVKRN 425 V+A + V N Sbjct: 461 VAAGVAVLDN 470 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,620,157 Number of Sequences: 219361 Number of extensions: 1913587 Number of successful extensions: 5424 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5419 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
