ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd14o23 |
|---|---|
| Clone Library Name | barley_pub |
>TMM83_HUMAN (Q96N35) Transmembrane protein 83| Length = 136 Score = 32.0 bits (71), Expect = 1.9 Identities = 24/92 (26%), Positives = 43/92 (46%) Frame = +1 Query: 211 HHLHMHSTTTHIYRLLGPTRFTHCLSYLAEISSIVSMSLAFRIKLSRWLRFSSQLSSNLA 390 HH + HI+ LL + LS + S+SL + L L S +S +L+ Sbjct: 8 HHSAIPEDFLHIFLLLQKISVSLPLSLSQSVCLFYSISLCVSLLLHISLCVSVYVSLSLS 67 Query: 391 SFTFSWCRSI*NISLHVYISRNRTIISWN*CF 486 SF C S+ + H +S++ +++++ CF Sbjct: 68 SFP---CFSLTHTHTHSQLSKDTSVLTFTFCF 96
>AGTR1_SHEEP (O77590) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPVGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_PIG (P30555) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPVGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_CANFA (P43240) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_BOVIN (P25104) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPTIIHRNVFFIENTNITVCAFHYESQNSTLPVGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_RABIT (P34976) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_PANTR (Q9GLN9) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_HUMAN (P30556) Type-1 angiotensin II receptor (AT1) (AT1AR) (AT1BR)| Length = 359 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>GLNE_VIBVU (Q8DEH6) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 950 Score = 31.2 bits (69), Expect = 3.2 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = +2 Query: 245 YTGCWALQDSLTASLILLKSVPLSVCPWHFESSCPDGFGLAVNSVATLLPSLLVGAG 415 +T W+L++SL+ L +++ W ++ C + +G N+ P L++G G Sbjct: 109 FTQAWSLEESLSHLSELAEAMIFETYQWQYQLCCKE-WGTPTNAQGEAQPMLIIGMG 164
>AGTRA_RAT (P25095) Type-1A angiotensin II receptor (AT1) (AT1A)| Length = 359 Score = 31.2 bits (69), Expect = 3.2 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLMAGLASLPAVIHRNVYFIENTNITVCAFHYESRNSTLPIGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTRA_MOUSE (P29754) Type-1A angiotensin II receptor (AT1) (AT1A)| Length = 359 Score = 31.2 bits (69), Expect = 3.2 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + L Sbjct: 148 TCIII-WLMAGLASLPAVIHRNVYFIENTNITVCAFHYESRNSTLPIGLGLTKNILGFLF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>AGTR1_CAVPO (Q9WV26) Type-1 angiotensin II receptor (AT1)| Length = 359 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + + Sbjct: 148 TCVII-WLMAGLASLPAVIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFMF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>NAPH_HAEIN (P44653) Ferredoxin-type protein napH homolog| Length = 287 Score = 30.8 bits (68), Expect = 4.2 Identities = 27/87 (31%), Positives = 36/87 (41%) Frame = +2 Query: 188 LVWCHLSSTIFTCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFESSCPDGFGLA 367 L W LS L Y G W L+ + + SL LL ++PLS D A Sbjct: 25 LFWRRLSQLSILAMFLSGPYFGVWILKGNYSGSL-LLDTIPLS-----------DPLITA 72 Query: 368 VNSVATLLPSLLVGAGASETFLFTSIL 448 + A LP L GA+ LF ++L Sbjct: 73 ESLAARHLPDALTLIGAAIIVLFYAVL 99
>MOB1_YEAST (P40484) Maintenance of ploidy protein MOB1 (MPS1 binder 1)| Length = 236 Score = 30.4 bits (67), Expect = 5.4 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = -2 Query: 233 VECM*RWCCSNDTRRDHELLFSSLLTSVV--GVVDRCNPSLIQNSLLTPARVMCHVCTYT 60 VEC+ RWC + D E LF S +T G + R +++ A + CH Sbjct: 136 VECLMRWC---QDQFDDESLFPSKVTGTFPEGFIQRVIQPILRRLFRVYAHIYCHHFNEI 192 Query: 59 PETQLRHVSN 30 E L+ V N Sbjct: 193 LELNLQTVLN 202
>AGTRB_RAT (P29089) Type-1B angiotensin II receptor (AT1B) (AT3)| Length = 359 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 221 TCTLLPHIYTGCWALQDSLTASLILLKSVPLSVCPWHFE---SSCPDGFGLAVNSVATLL 391 TC ++ + G +L + ++ +++ ++VC +H+E S+ P G GL N + + Sbjct: 148 TCIII-WLMAGLASLPAVIYRNVYFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFVF 206 Query: 392 PSLLV 406 P L++ Sbjct: 207 PFLII 211
>NR1D2_RAT (Q63504) Orphan nuclear receptor NR1D2 (Rev-erb-beta) (EAR4)| Length = 578 Score = 29.6 bits (65), Expect = 9.3 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = -1 Query: 468 NDGSVSANIDVKRNVSDAPAPTKSEGSKVATELTAKPKPSGQLDSKCQGH-TDNGTDFSK 292 N G V A I + S +PA SEGS+ + + ++ PS S C + TD S Sbjct: 4 NAGGVIAYISSSSSAS-SPASCHSEGSENSFQSSSSSVPSSPNSSNCDANGNPKNTDVSS 62 Query: 291 IREAVSESCRAQQPV 247 I + V +S R PV Sbjct: 63 I-DGVLKSDRTDCPV 76
>GLNE_VIBVY (Q7MNY4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 950 Score = 29.6 bits (65), Expect = 9.3 Identities = 14/57 (24%), Positives = 28/57 (49%) Frame = +2 Query: 245 YTGCWALQDSLTASLILLKSVPLSVCPWHFESSCPDGFGLAVNSVATLLPSLLVGAG 415 +T W+L+ SL+ L +++ W ++ C + +G N+ P L++G G Sbjct: 109 FTQAWSLEASLSHLSELAEAMIFETYQWQYQLCCQE-WGTPTNAQGEAQPMLIIGMG 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,082,082 Number of Sequences: 219361 Number of extensions: 2095828 Number of successful extensions: 5800 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 5596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5795 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
