ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14o22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL21_ARATH (Q43291) 60S ribosomal protein L21 216 3e-56
2RL21_CYAPA (O82574) 60S ribosomal protein L21 117 3e-26
3RL21B_YEAST (Q12672) 60S ribosomal protein L21-B 114 2e-25
4RL21A_YEAST (Q02753) 60S ribosomal protein L21-A 114 2e-25
5RL21_HUMAN (P46778) 60S ribosomal protein L21 109 6e-24
6RL21_CHILA (Q6QN05) 60S ribosomal protein L21 109 6e-24
7RL21_RAT (P20280) 60S ribosomal protein L21 104 2e-22
8RL21B_SCHPO (O42706) 60S ribosomal protein L21-B 104 2e-22
9RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A 104 2e-22
10RL21_MOUSE (O09167) 60S ribosomal protein L21 104 2e-22
11RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment) 97 5e-20
12RL21_ENTHI (P38653) 60S ribosomal protein L21 96 1e-19
13RL21_CAEEL (P34334) 60S ribosomal protein L21 96 1e-19
14RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21 83 7e-16
15RL21_SULAC (Q4JB11) 50S ribosomal protein L21e 36 0.10
16RL21_AERPE (P58077) 50S ribosomal protein L21e 36 0.10
17RL21_METKA (Q8TUU3) 50S ribosomal protein L21e 35 0.17
18RL21_METTH (O27378) 50S ribosomal protein L21e 34 0.39
19RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e 32 1.9
20RL21_ARCFU (O28743) 50S ribosomal protein L21e 31 2.5
21ZN691_MOUSE (Q3TDE8) Zinc finger protein 691 31 2.5
22RL21_PYRHO (O74001) 50S ribosomal protein L21e 30 4.3
23RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e 30 4.3
24YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 30 5.6
25RL21_METJA (P54013) 50S ribosomal protein L21e 30 5.6
26KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C 30 5.6
27HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18) 30 7.3
28HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18) 30 7.3
29HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18) 30 7.3
30RL21_SULTO (Q975F2) 50S ribosomal protein L21e 30 7.3
31OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondria... 29 9.6
32HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18) 29 9.6

>RL21_ARATH (Q43291) 60S ribosomal protein L21|
          Length = 164

 Score =  216 bits (551), Expect = 3e-56
 Identities = 100/115 (86%), Positives = 108/115 (93%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK
Sbjct: 50  KGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRK 109

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 222
            KND+LKA AKA GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY
Sbjct: 110 KKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164



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>RL21_CYAPA (O82574) 60S ribosomal protein L21|
          Length = 161

 Score =  117 bits (292), Expect = 3e-26
 Identities = 61/109 (55%), Positives = 80/109 (73%), Gaps = 3/109 (2%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMP K+YHGRTG VWNVTKRAIGVEINK+V +RII+KRIHVR++HV+ S C + F  R 
Sbjct: 50  KGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRV 109

Query: 386 VKNDQLKAEAK-ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
            +ND++K +A  A+  V STKR P+ PK G ++  +G   ET   IPY+
Sbjct: 110 KENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158



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>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B|
          Length = 160

 Score =  114 bits (285), Expect = 2e-25
 Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF  R 
Sbjct: 50  KGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERV 109

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
             N   +AEAKA+G  +  KRQP  P+   +V  EG   +T+ P+PY+
Sbjct: 110 KANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157



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>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A|
          Length = 160

 Score =  114 bits (285), Expect = 2e-25
 Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF  R 
Sbjct: 50  KGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERV 109

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
             N   +AEAKA+G  +  KRQP  P+   +V  EG   +T+ P+PY+
Sbjct: 110 KANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157



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>RL21_HUMAN (P46778) 60S ribosomal protein L21|
          Length = 159

 Score =  109 bits (273), Expect = 6e-24
 Identities = 52/108 (48%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK YHG+TGRV+NVT+ A+G+ +NKQV  +I+ KRI+VR+EH++ S+  + F  R 
Sbjct: 49  KGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
            +NDQ K EAK +G  +  KRQP  P+    V   G   E + PIPY+
Sbjct: 109 KENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156



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>RL21_CHILA (Q6QN05) 60S ribosomal protein L21|
          Length = 159

 Score =  109 bits (273), Expect = 6e-24
 Identities = 52/108 (48%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK YHG+TGRV+NVT+ A+G+ +NKQV  +I+ KRI+VR+EH++ S+  + F  R 
Sbjct: 49  KGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
            +NDQ K EAK +G  +  KRQP  P+    V   G   E + PIPY+
Sbjct: 109 KENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156



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>RL21_RAT (P20280) 60S ribosomal protein L21|
          Length = 159

 Score =  104 bits (260), Expect = 2e-22
 Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK YHG+TGRV+NVT+ A+G+ +NKQV  +I+ KRI+VR+EH++ S+  + F  R 
Sbjct: 49  KGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
            +NDQ K EAK +G  +    QP  P+    V   G   E + PIPY+
Sbjct: 109 KENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156



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>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B|
          Length = 160

 Score =  104 bits (259), Expect = 2e-22
 Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F  R 
Sbjct: 50  KGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRV 109

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 249
             N+  + EAKA+G+ +  +RQP  P     V     E VT  P+ YD
Sbjct: 110 KANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157



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>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A|
          Length = 160

 Score =  104 bits (259), Expect = 2e-22
 Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F  R 
Sbjct: 50  KGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRV 109

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 249
             N+  + EAKA+G+ +  +RQP  P     V     E VT  P+ YD
Sbjct: 110 KANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157



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>RL21_MOUSE (O09167) 60S ribosomal protein L21|
          Length = 159

 Score =  104 bits (259), Expect = 2e-22
 Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK YHG+TGRV+NVT+ A+G+ +NKQV  +I+ KRI+VR+EH++ S+  + F  R 
Sbjct: 49  KGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108

Query: 386 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 249
            +NDQ K EAK +G  +  KR    P+    V   G   E + PIPY+
Sbjct: 109 KENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156



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>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)|
          Length = 155

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 47/104 (45%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -2

Query: 557 PHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKN 378
           PHK YHG+TGR++NVT+ A+G+ +NKQV  RII KRI+VR+EH++ S+    F  R  +N
Sbjct: 51  PHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHEN 110

Query: 377 DQLKAEAKARGEVISTKRQPLGPKPGFMVEGTT-IETVTPIPYD 249
           ++ + EA+ +   ++ KRQP  P+ G  V  +   E V PIPY+
Sbjct: 111 ERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 154



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>RL21_ENTHI (P38653) 60S ribosomal protein L21|
          Length = 166

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 9/114 (7%)
 Frame = -2

Query: 563 GMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKV 384
           G+P+K +HG+TGRVWNV   AIGV +NK+V NRI+ KR+H+  EH++PS C ++F  RK 
Sbjct: 51  GLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKA 110

Query: 383 -------KNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIE--TVTPIPYD 249
                  +N QLK E K     +  KR P  P+P  +++G  I+  TV P+ ++
Sbjct: 111 AVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163



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>RL21_CAEEL (P34334) 60S ribosomal protein L21|
          Length = 160

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 45/111 (40%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMP K YHGRTGR++NVT+ A+G+ +NK+V   I+ KRI++R+EH++PS+C  +F  R 
Sbjct: 49  KGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRV 108

Query: 386 VKNDQLKAEAKARGE-VISTKRQPLGPKPGFMV--EGTTIETVTPIPYDVV 243
             ND+ +  AK+ G+ V + KR P+ P+    V  +    E + P+ +++V
Sbjct: 109 KSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159



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>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21|
          Length = 160

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 39/88 (44%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 387
           +GMPHK+YHGRTGRV++V  R++ V + K+V  + + K+I VR+EHV+ SRC+EE + R 
Sbjct: 49  KGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRI 108

Query: 386 VKNDQLKAEAKARGEVIS-TKRQPLGPK 306
           +   ++  +A++RG V++ +KR+  GP+
Sbjct: 109 LMAAEMARDAESRGVVLAPSKRKIEGPR 136



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>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e|
          Length = 103

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 19/49 (38%), Positives = 29/49 (59%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 420
           +GMPH+ YHG+ G V  V KR    E+   +G++   + + VR EH+ P
Sbjct: 52  KGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96



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>RL21_AERPE (P58077) 50S ribosomal protein L21e|
          Length = 107

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = -2

Query: 563 GMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 396
           GMPH+ +HG TG V  V KR    E+   +G +  RK + V   H++P   A E R
Sbjct: 54  GMPHRRFHGLTGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105



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>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e|
          Length = 102

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAE 405
           +GMPH  YHGRTG V     RA  V+I    G +   K++ V  EH++P    E
Sbjct: 51  KGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100



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>RL21_METTH (O27378) 50S ribosomal protein L21e|
          Length = 96

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 423
           RG PH  +HG+TGRV  +  ++  V +    GN+   K++ VR EH+Q
Sbjct: 50  RGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93



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>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e|
          Length = 101

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 420
           +GMPH+ Y G+ G++  + KR     ++  +G++   K I VR EH+ P
Sbjct: 52  QGMPHRRYQGKVGKI--IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96



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>RL21_ARCFU (O28743) 50S ribosomal protein L21e|
          Length = 97

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 420
           +GMPH  + GRTG V     RA  V++    G ++  K + VR EH++P
Sbjct: 50  KGMPHPRFQGRTGVVIGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94



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>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691|
          Length = 283

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 470 NRIIRKRIHVRVEHVQPSRCAEEFRLR 390
           NRI  +RIH+  +H Q ++C E FR R
Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151



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>RL21_PYRHO (O74001) 50S ribosomal protein L21e|
          Length = 97

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 414
           +GMP   +HGRTG V  V KR     +    GN++  K + +   H++P +
Sbjct: 51  KGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97



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>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e|
          Length = 97

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 414
           +GMP   +HGRTG V  V KR     +    GN++  K + +   H++P +
Sbjct: 51  KGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97



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>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 28/124 (22%), Positives = 46/124 (37%)
 Frame = -3

Query: 553 TSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLSMCSHPGVLRSSA*GK*RMT 374
           +++TT +P +                  ++SS   S S  S  S      SS        
Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------- 199

Query: 373 SSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVVTRVFGLSACT 194
           SS      V  +S+   SHS+ +  S S    SRPS     + +M S        ++  +
Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSS 259

Query: 193 TSSN 182
           +SS+
Sbjct: 260 SSSS 263



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>RL21_METJA (P54013) 50S ribosomal protein L21e|
          Length = 98

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPS 417
           +GMPH  +HGRTG V     RA  V++    G +   K+I    +H++P+
Sbjct: 51  KGMPHPRFHGRTGIVVGKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96



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>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C|
          Length = 1103

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 331  PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 224
            P GS +A       R+P +RP  P L  W  +SR++
Sbjct: 893  PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928



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>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 572

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 434 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 255
           + V P R   +  ++ +  D           ++ T +  L P PG +   TT++     P
Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194

Query: 254 YDVVNDLKGGY 222
             V+NDL   Y
Sbjct: 195 SLVINDLIYAY 205



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>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 572

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 434 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 255
           + V P R   +  ++ +  D           ++ T +  L P PG +   TT++     P
Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194

Query: 254 YDVVNDLKGGY 222
             V+NDL   Y
Sbjct: 195 SLVINDLIYAY 205



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>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 572

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 434 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 255
           + V P R   +  ++ +  D           ++ T +  L P PG +   TT++     P
Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194

Query: 254 YDVVNDLKGGY 222
             V+NDL   Y
Sbjct: 195 SLVINDLIYAY 205



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>RL21_SULTO (Q975F2) 50S ribosomal protein L21e|
          Length = 103

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -2

Query: 566 RGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 426
           +GMPH+ YHG+ G +    KR     +   +G++   K I VR EH+
Sbjct: 52  KGMPHRRYHGKVGVIQG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94



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>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor|
           (Cytochrome oxidase biogenesis protein 1-1) (Sp1)
          Length = 374

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 361 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 486
           SA+ +SFF  +R+ S   +DG T     W   L +  P C+L
Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211



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>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 572

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 434 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 255
           + V P R   +  ++ +  D           ++ T +  L P PG +   TT++     P
Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194

Query: 254 YDVVNDLKGGY 222
             V+NDL   Y
Sbjct: 195 SLVINDLIYAY 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,226,895
Number of Sequences: 219361
Number of extensions: 1893726
Number of successful extensions: 5190
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5189
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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