Clone Name | rbasd14o12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5) | 32 | 2.5 | 2 | SYR_PSEAE (Q9HUC8) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini... | 31 | 3.3 | 3 | SECR_PIG (P63298) Secretin precursor (Fragment) | 30 | 5.6 | 4 | NLTPD_RICCO (Q43119) Nonspecific lipid-transfer protein D, cotyl... | 30 | 9.6 |
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>SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5)| Length = 1989 Score = 31.6 bits (70), Expect = 2.5 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 101 SLGLEQELDTRGENRKNKYVQQDEENCNRENPP 199 SLG +E D G+N+KN+++ EN R + P Sbjct: 917 SLGEREEKDNAGKNQKNQFIVSHSENQERNDSP 949
>SYR_PSEAE (Q9HUC8) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 587 Score = 31.2 bits (69), Expect = 3.3 Identities = 26/83 (31%), Positives = 41/83 (49%) Frame = +2 Query: 455 KNLGQINTREQITGKLIIH*NRQPRHLAHDSRHLAHAL*KIIDVTSCAMEKINVVLSL*C 634 + LGQ REQ+ GK+++ QP+ LA LA L + D+ + NV L Sbjct: 483 RKLGQ--GREQLGGKIVLE---QPQELA-----LAAQLAQFGDLIN------NVALKGVP 526 Query: 635 QNICFYLIEKSSIFFQYIKHCTV 703 +C YL E + +F + +HC + Sbjct: 527 HLLCAYLYELAGLFSSFYEHCPI 549
>SECR_PIG (P63298) Secretin precursor (Fragment)| Length = 131 Score = 30.4 bits (67), Expect = 5.6 Identities = 22/80 (27%), Positives = 39/80 (48%) Frame = -1 Query: 691 LNVLEENARLLNQIEANILTSQAQNNIDLFHRTRSNINNLLQSMSQMPGIMSKMPRLPVS 512 L+ L ++ARL ++ + Q+ + T+S + L Q S MP + + MP P Sbjct: 39 LSRLRDSARLQRLLQGLVGKRSQQDPENNTAWTKSGEDRLCQLWSHMPALQAWMPMKP-P 97 Query: 511 VDDKLAGYLLPGVNLAQVLS 452 VD + +L PG+ ++S Sbjct: 98 VDQAWSPWLPPGLRAGALVS 117
>NLTPD_RICCO (Q43119) Nonspecific lipid-transfer protein D, cotyledon-specific| isoform precursor (NS-LTP D) Length = 116 Score = 29.6 bits (65), Expect = 9.6 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = -2 Query: 600 IAQEVTSIIFYKA*AKCLES*ARCLGCLFQWMISLPVICSLVLIWP 463 +AQ V S+ KA +CL++ ++ LG Q++ +P C++ + +P Sbjct: 60 LAQTVKSVDDKKAICRCLKASSKSLGIKDQFLSKIPAACNIKVGFP 105 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,470,424 Number of Sequences: 219361 Number of extensions: 2011407 Number of successful extensions: 5189 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5041 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5187 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)