ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14o03 |
|---|---|
| Clone Library Name | barley_pub |
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 62.8 bits (151), Expect = 1e-09 Identities = 24/48 (50%), Positives = 35/48 (72%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 E +CPVCL + ++M F CGH TC CG ++++CPICR+ I+ R+ LY Sbjct: 960 EQTMCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY 1007 Score = 44.7 bits (104), Expect = 3e-04 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = -2 Query: 377 PPAADAGASELQLCPVCLAKPRDMAFG-CGH-QTCSGCGPQVADCPICRRPIDTRVKL 210 P + + L+ C VC RD FG CGH TCS C P+V C +C+ + +R K+ Sbjct: 807 PSMINNDSETLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVKKCLLCKEQVQSRTKI 864
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 62.8 bits (151), Expect = 1e-09 Identities = 24/48 (50%), Positives = 35/48 (72%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 E +CPVCL + ++M F CGH TC CG ++++CPICR+ I+ R+ LY Sbjct: 983 EQTMCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY 1030 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Frame = -2 Query: 374 PAADAGASELQLCPVCLAKPRDMAFG-CGH-QTCSGCGPQVADCPICRRPIDTRVKL 210 P+ ++ L+ C VC RD FG CGH TCS C P+V C IC+ + +R K+ Sbjct: 805 PSLNSNNETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKI 861
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 62.4 bits (150), Expect = 1e-09 Identities = 24/48 (50%), Positives = 35/48 (72%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 E +CPVCL + ++M F CGH TC CG ++++CPICR+ I+ R+ LY Sbjct: 959 EQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -2 Query: 377 PPAADAGASELQLCPVCLAKPRDMAFG-CGH-QTCSGCGPQVADCPICRRPIDTRVKL 210 P + L+ C VC RD FG CGH TCS C P+V C IC+ + +R K+ Sbjct: 806 PSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKI 863
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 62.4 bits (150), Expect = 1e-09 Identities = 24/48 (50%), Positives = 35/48 (72%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 E +CPVCL + ++M F CGH TC CG ++++CPICR+ I+ R+ LY Sbjct: 959 EQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -2 Query: 377 PPAADAGASELQLCPVCLAKPRDMAFG-CGH-QTCSGCGPQVADCPICRRPIDTRVKL 210 P + L+ C VC RD FG CGH TCS C P+V C IC+ + +R K+ Sbjct: 806 PSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKI 863
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 60.1 bits (144), Expect = 6e-09 Identities = 22/48 (45%), Positives = 32/48 (66%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 E +CPVC + ++M F CGH TC CG Q+ CPICR+ ++ R+ L+ Sbjct: 1179 EQTMCPVCFDRIKNMVFLCGHGTCQMCGDQIEGCPICRKTVEKRILLF 1226 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -2 Query: 377 PPAADAGASELQLCPVCLAKPRDMAFG-CGHQTC-SGCGPQVADCPICRRPIDTRVKL 210 PP + A E C VC RD F CGH +C C P+V C ICR + +R K+ Sbjct: 960 PPKSSASLDE---CLVCSDAKRDTVFKPCGHVSCCETCAPRVKKCLICRETVSSREKI 1014
>MIB2_HUMAN (Q96AX9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (Zinc finger ZZ type with ankyrin repeat domain protein 1) (Skeletrophin) (Novelzin) (Novel zinc finger protein) (Putative NF-kappa-B-activating protein 002N) Length = 1013 Score = 53.1 bits (126), Expect = 8e-07 Identities = 18/44 (40%), Positives = 29/44 (65%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 CP+C+ + F CGH C+ CG ++ CPICR+PI R++++ Sbjct: 969 CPICIDSHIRLVFQCGHGACAPCGSALSACPICRQPIRDRIQIF 1012
>MIB2_MOUSE (Q8R516) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (Mind bomb-2) (Skeletrophin) (Dystrophin-like protein) (Dyslike) Length = 973 Score = 52.0 bits (123), Expect = 2e-06 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 CP+C+ + F CGH C+ CG + CPICR+PI R++++ Sbjct: 929 CPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIF 972
>MIB2_RAT (Q68LP1) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) (RBSC-skeletrophin/dystrophin-like polypeptide) Length = 971 Score = 52.0 bits (123), Expect = 2e-06 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 CP+C+ + F CGH C+ CG + CPICR+PI R++++ Sbjct: 927 CPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIF 970
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 49.7 bits (117), Expect = 9e-06 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Frame = -2 Query: 380 PPPAADAGAS-----ELQLCPVCLAKPRDMAF-GCGHQTCSGCGPQVADCPICRRPIDTR 219 PP A D A E + C VCL + + F CGH C+ C P + CPICR P+ +R Sbjct: 233 PPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSR 292 Query: 218 VKLY 207 V+ + Sbjct: 293 VRTF 296
>MIB2_CHICK (Q5ZIJ9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb| homolog 2) Length = 954 Score = 47.4 bits (111), Expect = 4e-05 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVKLY 207 CP+C+ + F CGH +C C + CPICR+ I R++++ Sbjct: 910 CPICIDDQIKLVFQCGHGSCPDCSTALTVCPICRQAIRERIQIF 953
>IAP3_NPVOP (P41437) Apoptosis inhibitor 3 (IAP-3)| Length = 268 Score = 47.4 bits (111), Expect = 4e-05 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -2 Query: 374 PAADAGASELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 PA +A ++ +LC +CL + + F CGH C C V CP+CR +D V++Y Sbjct: 209 PAVEAEVADDRLCKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVCRGQLDKAVRMY 266
>IAP2_DROME (Q24307) Apoptosis 2 inhibitor (Inhibitor of apoptosis 2) (dIAP2)| (DIAP) (IAP homolog A) (IAP-like protein) (DILP) Length = 498 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGH-QTCSGCGPQVADCPICRRPIDTRVKLY 207 + +LC VCL + + F CGH TC+ C P VA+CP+CR I V+ + Sbjct: 447 DARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCRADIKGFVRTF 496
>LRSM1_MOUSE (Q80ZI6) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) Length = 727 Score = 43.5 bits (101), Expect = 6e-04 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 15/100 (15%) Frame = -2 Query: 461 RANNFRSVPSNLREEATLDSTITLSVTPPPAA---------DAGASELQL----CPVCLA 321 RA + +VP E L++ + ++ PP A A +EL + C VCL Sbjct: 625 RAQDLLAVPRVQPELKPLENEVLGALEPPTAPRELQESVRPSAPPAELDMPTSECVVCLE 684 Query: 320 KPRDMAF-GCGHQTC-SGCGPQVADCPICRRPIDTRVKLY 207 + M F CGH C C + CP+CR+ I R+++Y Sbjct: 685 REAQMVFLTCGHVCCCQQCCQPLRTCPLCRQEISQRLRIY 724
>SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven in absentia| homolog 1) Length = 339 Score = 42.7 bits (99), Expect = 0.001 Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Frame = -2 Query: 539 LAKSPERVPLPPPFAS-YNSTSRAAPYRANNF--RSVPSNLREEATLDSTITLSVTPPPA 369 L K+ RV PP +S + R + F R+ R+E+ I S Sbjct: 18 LGKTMARVQSNPPGSSEFFLIFRTVTLKCKIFQYRTTQRRPRKESKASHHIFQSAGGGAT 77 Query: 368 ADAGASELQL--CPVCLAK--PRDMAFGCGHQTCSGCGPQVADCPICRRP 231 D+ A L + CPVCL P M GH CS C P++ CP CR P Sbjct: 78 DDSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGP 127
>LRSM1_HUMAN (Q6UWE0) Ubiquitin ligase protein LRSAM1 (EC 6.3.2.-) (Leucine-rich| repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) (hTAL) Length = 723 Score = 42.7 bits (99), Expect = 0.001 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = -2 Query: 380 PPPAADAGASELQLCPVCLAKPRDMAF-GCGHQTC-SGCGPQVADCPICRRPIDTRVKLY 207 PP + ASE C VCL + M F CGH C C + CP+CR+ I R+++Y Sbjct: 664 PPAELEVQASE---CVVCLEREAQMIFLNCGHVCCCQQCCQPLRTCPLCRQDIAQRLRIY 720
>RFFL_RAT (Q8CIN9) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) Length = 362 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E LC +C+ P D + CGH TC+ CG ++ +CPICR+ + V ++ Sbjct: 311 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVF 360
>RFFL_MOUSE (Q6ZQM0) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (Fring) Length = 377 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E LC +C+ P D + CGH TC+ CG ++ +CPICR+ + V ++ Sbjct: 326 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVF 375
>RFFL_HUMAN (Q8WZ73) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) (Fring) (Caspases-8 and -10-associated RING finger protein 2) (CARP-2) (Caspase regulator CARP2) (RING finger protein 189) (RING finge Length = 363 Score = 42.7 bits (99), Expect = 0.001 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E LC +C+ P D + CGH TC+ CG ++ +CPICR+ + V ++ Sbjct: 312 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVF 361
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 42.0 bits (97), Expect = 0.002 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 8/118 (6%) Frame = -2 Query: 551 LGCR--LAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTP 378 LGCR A +P R P P +S S A ++ +NF + T L T Sbjct: 47 LGCRELAASAPAR---PAPASSEIMASAAKEFKMDNF----------SPKAGTSKLQQTV 93 Query: 377 PPAADAGASELQLCPVCLAKPRDMAF--GCGHQTCSGC----GPQVADCPICRRPIDT 222 P A AS CP+CL + ++++ C H+ C C A+CP+C++P D+ Sbjct: 94 P----ADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDS 147
>SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven in absentia| homolog 1b) (Siah1b) (Siah-1b) Length = 282 Score = 41.6 bits (96), Expect = 0.002 Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 11/77 (14%) Frame = -2 Query: 425 REEATLDSTITLSVTP----PPAADAGASELQL-----CPVCL--AKPRDMAFGCGHQTC 279 R+ AT ST T P P D AS L CPVC P + GH C Sbjct: 3 RQAATALSTGTSKCPPSQRVPALTDTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVC 62 Query: 278 SGCGPQVADCPICRRPI 228 S C P++ CP CR P+ Sbjct: 63 SNCRPKLTCCPTCRGPL 79
>IAP1_DROME (Q24306) Apoptosis 1 inhibitor (Inhibitor of apoptosis 1) (dIAP1)| (Protein thread) Length = 438 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Frame = -2 Query: 389 SVTPPPAADAGASEL---QLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPID 225 +V P +G++ + +LC +C + AF CGH C+ C V CP+CR+P Sbjct: 371 AVATPSTNSSGSTSIPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSVTKCPLCRKPFT 430 Query: 224 TRVKLY 207 +++Y Sbjct: 431 DVMRVY 436
>SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein CG13030 (EC| 6.3.2.-) Length = 351 Score = 40.0 bits (92), Expect = 0.007 Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Frame = -2 Query: 542 RLAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTIT----LSVTPP 375 R +P V P R +P A VPS ++ + S I L T Sbjct: 34 RRQSAPALVVPPEETTHVVVVKRQSPDAAAAGELVPSRRKDSVAVQSGIVATGPLDTTRS 93 Query: 374 PAADAGASELQLCPVCLA--KPRDMAFGCGHQTCSGCGPQVADCPICR 237 A D L CPVC P M GH CS C ++ CP+CR Sbjct: 94 GARDDFLMALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCR 141
>SIAH1_BRARE (Q7ZVG6) Ubiquitin ligase Siah1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) Length = 282 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -2 Query: 395 TLSVTPPPAADAGASELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPI 228 TLS T A+++ + L CPVC P + GH CS C P++ CP CR P+ Sbjct: 24 TLSGTT--ASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPL 79
>SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -2 Query: 389 SVTPPPAADAGASELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPI 228 ++T A++ + L CPVC P + GH CS C P++ CP CR P+ Sbjct: 24 ALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPL 79
>SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -2 Query: 389 SVTPPPAADAGASELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPI 228 ++T A++ + L CPVC P + GH CS C P++ CP CR P+ Sbjct: 24 ALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPL 79
>SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven in absentia| homolog 1a) (Siah1a) (Siah-1a) (mSiah-1a) Length = 282 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -2 Query: 389 SVTPPPAADAGASELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPI 228 ++T A++ + L CPVC P + GH CS C P++ CP CR P+ Sbjct: 24 ALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPL 79
>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2) (TNFR2-TRAF signaling complex protein 1) (IAP homolog C) (Apoptosis inhibitor 2) (API2) Length = 604 Score = 38.9 bits (89), Expect = 0.015 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 E + C VC+ K + F CGH C C P + CPICR I V+ + Sbjct: 553 EERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTF 602
>RNF34_BOVIN (Q5E9J6) RING finger protein 34| Length = 375 Score = 38.9 bits (89), Expect = 0.015 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 LC +C+ D + CGH TC+ CG ++++CPICR+ + V ++ Sbjct: 327 LCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 373
>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)| (Phafin-1) Length = 376 Score = 38.9 bits (89), Expect = 0.015 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 LC +C+ D + CGH TC+ CG ++++CPICR+ + V ++ Sbjct: 328 LCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 374
>RNF34_PONPY (Q5NVC7) RING finger protein 34| Length = 372 Score = 38.9 bits (89), Expect = 0.015 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 LC +C+ D + CGH TC+ CG ++++CPICR+ + V ++ Sbjct: 324 LCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 370
>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)| (FYVE-RING finger protein Momo) (Human RING finger homologous to inhibitor of apoptosis protein) (hRFI) (Caspases-8 and -10-associated RING finger protein 1) (CARP-1) (Caspase regulat Length = 372 Score = 38.9 bits (89), Expect = 0.015 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 LC +C+ D + CGH TC+ CG ++++CPICR+ + V ++ Sbjct: 324 LCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 370
>YP74_CAEEL (Q09221) Hypothetical protein B0228.4| Length = 1633 Score = 38.9 bits (89), Expect = 0.015 Identities = 21/42 (50%), Positives = 28/42 (66%) Frame = -2 Query: 674 FVNFTGIMSKKISQSNKETEFALSALMEIPLQYKATLQLGIL 549 FV+F +M + N + FAL+ALMEIP QYKA +LG+L Sbjct: 1589 FVDFHKVM---FNAPNADASFALNALMEIPDQYKAIKELGLL 1627
>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)| Length = 381 Score = 38.9 bits (89), Expect = 0.015 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 LC +C+ D + CGH TC+ CG ++++CPICR+ + V ++ Sbjct: 333 LCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF 379
>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (MIAP1) (MIAP-1) Length = 600 Score = 38.5 bits (88), Expect = 0.020 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 E ++C VC+ + + F CGH C C P + CPICR I V+ + Sbjct: 549 EERMCKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 472 Score = 38.5 bits (88), Expect = 0.020 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQTC-SGCGPQVADCPICRRPID 225 E LC +C + D AF CGH C C Q+ CP+CR ++ Sbjct: 380 EALLCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQSCPVCRSEVE 423
>PIAP_PIG (O62640) Putative inhibitor of apoptosis| Length = 358 Score = 38.5 bits (88), Expect = 0.020 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 E + C VC+ K + F CGH C C P + CPICR I V+ + Sbjct: 307 EERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 356
>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell| apoptosis protein) Length = 611 Score = 38.1 bits (87), Expect = 0.026 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 E + C VC+ K + F CGH C C P + CPICR I V+ + Sbjct: 560 EERTCKVCMDKEVSIVFIPCGHLVVCKECAPSLRKCPICRGTIKGTVRTF 609
>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| homolog) (SmSINA) Length = 371 Score = 38.1 bits (87), Expect = 0.026 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = -2 Query: 404 STITLSVTPPPAADAGASELQL---CPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPIC 240 S ++ P +D+ + +L CPVC+ A P M GH C+ C +++ CP C Sbjct: 101 SDTVCNILPHNTSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKLSSCPTC 160 Query: 239 RRPID 225 R +D Sbjct: 161 RGNLD 165
>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)| Length = 943 Score = 37.4 bits (85), Expect = 0.044 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -2 Query: 338 CPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 C +C + P ++ C H + CS C ++ CPICR I+ ++ +Y Sbjct: 897 CVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRSHIENKISIY 942
>BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (HIAP2) (HIAP-2) (C-IAP1) (TNFR2-TRAF signaling complex protein 2) (IAP homolog B) Length = 618 Score = 37.4 bits (85), Expect = 0.044 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 E + C VC+ K + F CGH C C P + CPICR I V+ + Sbjct: 567 EERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 616
>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 37.0 bits (84), Expect = 0.057 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQTC-SGCGPQVADCPICRRPIDTRVKLY*QPH 195 E LC VC + + F CGH C C Q+ CP+CR ++ +Y H Sbjct: 383 EAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTH 436
>SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven in absentia| homolog 2-like) (Siah-2) Length = 331 Score = 37.0 bits (84), Expect = 0.057 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = -2 Query: 404 STITLSVTPPPAADAGASELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRP 231 + + L V P + L CPVC P + GH C+ C +++ CP CR P Sbjct: 67 AAVALPVAALPGQSPELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGP 126 Query: 230 IDTRVK 213 + ++ Sbjct: 127 LTPSIR 132
>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of| apoptosis protein 2) (MIAP2) (MIAP-2) Length = 612 Score = 37.0 bits (84), Expect = 0.057 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 E + C VC+ + + F CGH C C P + CPICR I V+ + Sbjct: 561 EERTCKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTF 610
>SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 36.6 bits (83), Expect = 0.075 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = -2 Query: 416 ATLDSTITLSVTPPPAADAGAS----ELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVA 255 A S+ + S++ DAG S L CPVC P + GH C C ++ Sbjct: 43 ANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT 102 Query: 254 DCPICRRPI 228 CP CR P+ Sbjct: 103 CCPTCRGPL 111
>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 36.6 bits (83), Expect = 0.075 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = -2 Query: 416 ATLDSTITLSVTPPPAADAGAS----ELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVA 255 A S+ + S++ DAG S L CPVC P + GH C C ++ Sbjct: 43 ANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT 102 Query: 254 DCPICRRPI 228 CP CR P+ Sbjct: 103 CCPTCRGPL 111
>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 36.6 bits (83), Expect = 0.075 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = -2 Query: 416 ATLDSTITLSVTPPPAADAGAS----ELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVA 255 A S+ + S++ DAG S L CPVC P + GH C C ++ Sbjct: 43 ANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT 102 Query: 254 DCPICRRPI 228 CP CR P+ Sbjct: 103 CCPTCRGPL 111
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 36.6 bits (83), Expect = 0.075 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = -2 Query: 416 ATLDSTITLSVTPPPAADAGAS----ELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVA 255 A S+ + S++ DAG S L CPVC P + GH C C ++ Sbjct: 60 ANTSSSSSSSLSSAGGGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT 119 Query: 254 DCPICRRPI 228 CP CR P+ Sbjct: 120 CCPTCRGPL 128
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 36.6 bits (83), Expect = 0.075 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 7/51 (13%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQT-CSGCGPQV-----ADCPICRRPIDTRVKLY 207 C +C D + + CGH C CG ++ A CPICRRPI +K Y Sbjct: 521 CTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIKTY 571
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 36.6 bits (83), Expect = 0.075 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 7/51 (13%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQT-CSGCGPQV-----ADCPICRRPIDTRVKLY 207 C +C D + + CGH C CG ++ A CPICRRPI +K Y Sbjct: 521 CTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIKTY 571
>BIRC8_GORGO (Q95M71) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) Length = 236 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E +LC +C+ + + F CGH TC C V CP+C ID + +++ Sbjct: 185 EEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCNAVIDFKQRVF 234
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 35.4 bits (80), Expect = 0.17 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 8/47 (17%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGCGPQVA-------DCPICRRPIDT 222 CPVCL ++ + CGH C GC ++ CP+CR+ +D+ Sbjct: 16 CPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDS 62
>MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQTC-SGCGPQVADCPICRRPIDTRVKLY*QPH 195 E LC C + + F CGH C C Q+ CP+CR ++ +Y H Sbjct: 383 EAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTH 436
>TRI10_MOUSE (Q9WUH5) Tripartite motif protein 10 (RING finger protein 9)| (Hematopoietic RING finger 1) Length = 489 Score = 35.4 bits (80), Expect = 0.17 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 12/60 (20%) Frame = -2 Query: 374 PAADAGASELQLCPVCLAKPRD-MAFGCGHQTCSGC--------GPQVAD---CPICRRP 231 P+ + A E+ CP+C R+ + CGH C GC GP+ + CP+C+ P Sbjct: 5 PSVTSLADEVN-CPICQGTLREPVTIDCGHNFCRGCLTRYCEIPGPESEESLSCPLCKEP 63
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 35.0 bits (79), Expect = 0.22 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%) Frame = -2 Query: 362 AGASELQLCPVCLAKPRDMAF--GCGHQTCSGC----GPQVADCPICRRPIDT 222 A AS CP+CL + ++++ C H+ C C A+CP+C++P D+ Sbjct: 96 ADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDS 148
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 35.0 bits (79), Expect = 0.22 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGCGPQVA-------DCPICRRPID 225 CP+CL ++ + CGH C GC ++ CP+CR+ +D Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVD 61
>IAP_GVCP (P41436) Apoptosis inhibitor IAP| Length = 275 Score = 35.0 bits (79), Expect = 0.22 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = -2 Query: 344 QLCPVCLAKPRDMAF-GCGHQT-CSGCGPQVADCPICRRPIDTRVKLY 207 +LC +C + + F CGH C+ C V CP+CR+ + + +K+Y Sbjct: 226 KLCKICYVEECIVCFVPCGHVVACAKCALSVDKCPMCRKIVTSVLKVY 273
>BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) (Testis-specific inhibitor of apoptosis) Length = 236 Score = 34.7 bits (78), Expect = 0.28 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E +LC +C+ + + F CGH TC C V CP+C ID + +++ Sbjct: 185 EEKLCKICMDRYIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVF 234
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 34.7 bits (78), Expect = 0.28 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 8/46 (17%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGCGPQVAD-------CPICRRPID 225 CP+CL ++ + CGH C C +++ CP+CR+ +D Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVD 61
>BIRC8_PANTR (Q95M72) Baculoviral IAP repeat-containing protein 8 (Inhibitor of| apoptosis-like protein 2) (IAP-like protein 2) (ILP-2) Length = 236 Score = 34.3 bits (77), Expect = 0.37 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = -2 Query: 344 QLCPVCLAKPRDMAF-GCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 +LC +C+ + + F CGH TC C V CP+C ID + +++ Sbjct: 187 KLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVF 234
>YQOE_CAEEL (Q95QN6) Hypothetical RING finger protein EEED8.16 in chromosome II| Length = 590 Score = 34.3 bits (77), Expect = 0.37 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = -2 Query: 365 DAGASELQLCPVCLAKPRD--MAFGCGHQTCSGCGPQVAD--CPICR 237 D +EL C VCL + D +A C H + C Q AD CP+CR Sbjct: 251 DTSLTELPTCAVCLERMDDSVLAILCNHSFHARCLEQWADNTCPVCR 297
>BIRC4_MOUSE (Q60989) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (MIAP3) (MIAP-3) Length = 496 Score = 33.9 bits (76), Expect = 0.48 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E +LC +C+ + + F CGH TC C V CP+C I + K++ Sbjct: 445 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIF 494
>BIRC4_HUMAN (P98170) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP-like protein) (HILP) Length = 497 Score = 33.9 bits (76), Expect = 0.48 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E +LC +C+ + + F CGH TC C V CP+C I + K++ Sbjct: 446 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIF 495
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 33.9 bits (76), Expect = 0.48 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 8/44 (18%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGC-------GPQVADCPICRRP 231 CP+CL +D ++ CGH C GC G CP CR P Sbjct: 12 CPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHP 55
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Frame = -2 Query: 416 ATLDSTITLSVTPPPAADAGASELQLCPVCLAKPRDMA--FGCGHQT----CSG--CGPQ 261 A LDS + + PP+A + + + C VC A+ MA CGH C+ CG Sbjct: 408 APLDSGASENSRKPPSASSAPALARECVVC-AEGEVMAALVPCGHNLFCMDCAVRICGKS 466 Query: 260 VADCPICRRPIDTRVKLY 207 +CP CR P + ++ Sbjct: 467 EPECPACRTPATQAIHIF 484
>BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (Inhibitor of| apoptosis protein 3) (X-linked inhibitor of apoptosis protein) (X-linked IAP) (IAP homolog A) (RIAP3) (RIAP-3) Length = 496 Score = 33.5 bits (75), Expect = 0.63 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 350 ELQLCPVCLAKPRDMAF-GCGHQ-TCSGCGPQVADCPICRRPIDTRVKLY 207 E +LC +C+ + + F CGH TC C V CP+C I + K++ Sbjct: 445 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCCTVITFKQKIF 494
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 33.5 bits (75), Expect = 0.63 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -2 Query: 374 PAADAGASELQLCPVCL-AKPRDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVK 213 PAA+A CPVCL + + CGH CS C P+ C +CR + V+ Sbjct: 19 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVR 78
>AKIB1_MOUSE (Q6ZPS6) Ankyrin repeat and IBR domain-containing protein 1| (Fragment) Length = 1087 Score = 33.5 bits (75), Expect = 0.63 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = -2 Query: 533 KSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGA 354 +S ++P PPP + YN+ R P R T I+LS P D Sbjct: 286 RSGVQMPTPPP-SGYNAWDTLPSPRT------PRTTRSSVTSPDEISLS---PGDLDTSL 335 Query: 353 SELQLCPVCLAK-PRDMAFGCGHQTCSGC 270 ++ +C + + + P DM CGH C GC Sbjct: 336 CDICMCSISVFEDPVDMP--CGHDFCRGC 362
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 33.5 bits (75), Expect = 0.63 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -2 Query: 374 PAADAGASELQLCPVCL-AKPRDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVK 213 PAA+A CPVCL + + CGH CS C P+ C +CR + V+ Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSTLAPGVR 76
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 33.5 bits (75), Expect = 0.63 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -2 Query: 374 PAADAGASELQLCPVCL-AKPRDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVK 213 PAA+A CPVCL + + CGH CS C P+ C +CR + V+ Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVR 76
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 33.5 bits (75), Expect = 0.63 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -2 Query: 374 PAADAGASELQLCPVCL-AKPRDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVK 213 PAA+A CPVCL + + CGH CS C P+ C +CR + V+ Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVR 76
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 33.5 bits (75), Expect = 0.63 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 8/46 (17%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGCGPQVAD-------CPICRRPID 225 CP+CL ++ + CGH C C ++ CP+CR+ +D Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVD 61
>AKIB1_HUMAN (Q9P2G1) Ankyrin repeat and IBR domain-containing protein 1| (Fragment) Length = 1214 Score = 33.5 bits (75), Expect = 0.63 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = -2 Query: 533 KSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGA 354 +S ++P PPP + YN+ R P R T I+LS P D Sbjct: 408 RSGVQMPTPPP-SGYNAWDTLPSPRT------PRTTRSSVTSPDEISLS---PGDLDTSL 457 Query: 353 SELQLCPVCLAK-PRDMAFGCGHQTCSGC 270 ++ +C + + + P DM CGH C GC Sbjct: 458 CDICMCSISVFEDPVDMP--CGHDFCRGC 484
>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) Length = 325 Score = 33.1 bits (74), Expect = 0.83 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 12/111 (10%) Frame = -2 Query: 509 PPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGA-------- 354 PPP + + A P A + P + A +V P A GA Sbjct: 20 PPPQTPHAPSPAAPPAAATISAAGPGSSAVPAAA------AVISGPGAGGGAGPVSPQHH 73 Query: 353 --SELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVK 213 + L CPVC P + GH C+ C +++ CP CR + ++ Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIR 124
>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (mSiah2) Length = 325 Score = 33.1 bits (74), Expect = 0.83 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 12/111 (10%) Frame = -2 Query: 509 PPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGA-------- 354 PPP + + A P A + P + A +V P A GA Sbjct: 20 PPPQTPHAPSPAAPPAAATISAAGPGSSAVPAAA------AVISGPGAGGGADPVSPQHH 73 Query: 353 --SELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVK 213 + L CPVC P + GH C+ C +++ CP CR + ++ Sbjct: 74 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIR 124
>MDM2_BRARE (O42354) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Double minute 2 protein) Length = 445 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Frame = -2 Query: 437 PSNLREEATLDSTITLSVTPPPAADAGASELQLCPVCLAKPRDMAFGC------GH-QTC 279 P LR ++ + T L A A+ L+ C +C ++P++ GC GH C Sbjct: 359 PPLLRRGSSQEETPELERFNSLEACLPATCLEPCVICQSRPKN---GCIVHGRTGHLMAC 415 Query: 278 SGCGPQVAD----CPICRRPIDTRVKLY 207 C ++ + CP+CR PI + V Y Sbjct: 416 YTCAKKLKNRNKLCPVCREPIQSVVLTY 443
>ILPR_BRALA (O02466) Insulin-like peptide receptor precursor (EC 2.7.10.1) (ILP| receptor) [Contains: Insulin-like peptide receptor alpha chain; Insulin-like peptide receptor beta chain] Length = 1363 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = -2 Query: 344 QLCPV-CLAKPRDMAFGCGHQTC-SGC-GPQVADCPICR 237 ++CP CL RD GC H+ C GC GP DC C+ Sbjct: 208 KVCPESCLGNCRDGISGCCHENCIGGCDGPTERDCVACK 246
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 32.3 bits (72), Expect = 1.4 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVAD----CPICRRPI 228 C +C+ D+ C H C C + +D CP+CRR + Sbjct: 155 CCICMDGRVDLILPCAHSFCQKCIDKWSDRHRSCPVCRRQV 195
>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (hSiah2) Length = 324 Score = 32.3 bits (72), Expect = 1.4 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 12/111 (10%) Frame = -2 Query: 509 PPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGA-------- 354 PPP + + A P A + P + A +V P GA Sbjct: 19 PPPQPQHTPSPAAPPAAATISAAGPGSSAVPAAA------AVISGPGGGGGAGPVSPQHH 72 Query: 353 --SELQLCPVCL--AKPRDMAFGCGHQTCSGCGPQVADCPICRRPIDTRVK 213 + L CPVC P + GH C+ C +++ CP CR + ++ Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIR 123
>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (dTopors) Length = 1038 Score = 32.3 bits (72), Expect = 1.4 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 23/122 (18%) Frame = -2 Query: 518 VPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPP-------PAADA 360 V + P N+ R P A F + + E ++ +S P P A Sbjct: 25 VIVEPGLEGSNAGGRTLPAAAIKFADLTESGSESGDNEAEEPVSAGPDNANAIGEPGTSA 84 Query: 359 GASELQ----------LCPVCLAKPRDMAF--GCGHQTCSGCGPQVA----DCPICRRPI 228 A+E C +CL++ R F C HQ C C + + +CP+C++P Sbjct: 85 SAAEENGTVERNSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPECPLCKQPF 144 Query: 227 DT 222 T Sbjct: 145 RT 146
>IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)| Length = 236 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Frame = -2 Query: 449 FRSVPSNLREEATLDSTITLSVTPP-----PAA--DAGASELQLCPVCLAKPRDMAF-GC 294 FR V + L + + + + PP P+A DA SE C VC + + F C Sbjct: 148 FRRVFDVDLDACALANVVRVDLPPPRLEPRPSAPFDAAVSE---CKVCFVNEKSVCFLPC 204 Query: 293 GHQT-CSGCGPQVADCPICRRPIDTRV 216 H C+ C P+ C +C I +R+ Sbjct: 205 RHLVVCAECSPRCKRCCVCNGKIASRL 231
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 10/62 (16%) Frame = -2 Query: 374 PAADAGASELQLCPVCLAKPRD-MAFGCGHQTCSGCGPQVAD------CPICR---RPID 225 P E LC VC RD + CGH C GC + + CP+C+ P D Sbjct: 9 PGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDRASPAD 68 Query: 224 TR 219 R Sbjct: 69 LR 70
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 13/47 (27%) Frame = -2 Query: 338 CPVCL---AKPRDMAFGCGHQTCSG----------CGPQVADCPICR 237 CPVCL KP ++ CGH C G C +V CP+CR Sbjct: 15 CPVCLNLMVKP--VSADCGHTFCQGCITLYFESIKCDKKVFICPVCR 59
>RNF19_HUMAN (Q9NV58) RING finger protein 19 (Dorfin) (Double ring-finger| protein) (p38 protein) Length = 838 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 389 SVTPPPAADAGASELQLCPVCLAKPRDMAFG-CGHQTCSGCGPQVADCPICRRPI 228 S++ + A A +++ CP C A M G C H TC+ CG + C +C + I Sbjct: 284 SISYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEF--CWLCMKEI 336
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 12/80 (15%) Frame = -2 Query: 416 ATLDSTITLSVTPPPAADAGASELQL----------CPVCL--AKPRDMAFGCGHQTCSG 273 AT+ S P P A A L CPVC P + GH C+ Sbjct: 33 ATISGGPGASAPPAPTAAAITGPLSQQHQELTSLFECPVCFDYVLPPILQCQAGHLVCNQ 92 Query: 272 CGPQVADCPICRRPIDTRVK 213 C +++ CP CR + ++ Sbjct: 93 CRQKLSCCPTCRASLTPSIR 112
>RNF19_MOUSE (P50636) RING finger protein 19 (XY body protein) (XYbp)| (Gametogenesis expressed protein GEG-154) (UBCM4-interacting protein 117) (UIP117) Length = 840 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 389 SVTPPPAADAGASELQLCPVCLAKPRDMAFG-CGHQTCSGCGPQVADCPICRRPI 228 S++ + A A +++ CP C A M G C H TC+ CG + C +C + I Sbjct: 284 SISYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEF--CWLCMKEI 336
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/69 (34%), Positives = 34/69 (49%) Frame = -2 Query: 557 GILGCRLAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTP 378 G+ G RL V L ++ + S +A A+ VPS+ R ++D +T VTP Sbjct: 176 GVAGLRLDCDSNTVNLARESSADGADSGSAHTGASVQLPVPSSTRPLTSVDGQLTSPVTP 235 Query: 377 PPAADAGAS 351 P DAGAS Sbjct: 236 SP--DAGAS 242
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -2 Query: 341 LCPVCLAKP-RDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVKL 210 +C +C P R + C H+ C C + +C +CRRP D+ + L Sbjct: 4 ICTICHNTPNRPVRLDCNHEFCYICIKGSIQNDMLNCAVCRRPFDSSIIL 53
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 10/52 (19%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQTCSGCGPQVAD---------CPICRRPIDTRV 216 +CP+C ++ ++ CGH C C Q + CP+CR+P V Sbjct: 13 VCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEV 64
>MDM2_MOUSE (P23804) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding| protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) Length = 489 Score = 31.6 bits (70), Expect = 2.4 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 11/117 (9%) Frame = -2 Query: 524 ERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGASEL 345 E+ PL Y+ S ++ ++ SV E D ++ S + + + Sbjct: 382 EQTPLSQESDDYSQPSTSSSIVYSSQESVKELKEETQDKDESVESSFS--------LNAI 433 Query: 344 QLCPVCLAKPRDMAFGC------GH-QTCSGCGPQVAD----CPICRRPIDTRVKLY 207 + C +C +P++ GC GH +C C ++ CP+CR+PI V Y Sbjct: 434 EPCVICQGRPKN---GCIVHGKTGHLMSCFTCAKKLKKRNKPCPVCRQPIQMIVLSY 487
>HXA13_MOUSE (Q62424) Homeobox protein Hox-A13 (Hox-1.10)| Length = 386 Score = 31.6 bits (70), Expect = 2.4 Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 9/102 (8%) Frame = -2 Query: 509 PPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGASELQLCPV 330 P A+Y+S AP A + + A S+ S P PA AGA + C Sbjct: 99 PGAAAAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASS---SGGPGPAGPAGAEAAKQCSP 155 Query: 329 CLAKPRDMA---------FGCGHQTCSGCGPQVADCPICRRP 231 C A + + FG G+ C+ GP C +P Sbjct: 156 CSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQP 197
>VP30_MABVM (P35258) Minor nucleoprotein VP30| Length = 277 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -2 Query: 521 RVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAAD 363 ++P P + +Y+ +R+ ++ S P+N A ST LS PPP D Sbjct: 24 QLPSKPHYTNYHPRARSMSSTRSSAESSPTNHIPRARPPSTFNLSKPPPPPKD 76
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 31.2 bits (69), Expect = 3.1 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGC----GPQVADCPICR 237 C +C+ D+ C H C C Q +CP+CR Sbjct: 147 CCICMDGKADLILPCAHSFCQKCIDKWSGQSRNCPVCR 184
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = -2 Query: 374 PAADAGASELQLCPVCLAK-PRDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVK 213 PA++ CPVCL + + CGH CS C P+ C +CR + V+ Sbjct: 18 PASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVR 77
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = -2 Query: 374 PAADAGASELQLCPVCLAK-PRDMAFGCGHQTCSGC-----GPQVADCPICRRPIDTRVK 213 PA++ CPVCL + + CGH CS C P+ C +CR + V+ Sbjct: 18 PASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVR 77
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/69 (33%), Positives = 34/69 (49%) Frame = -2 Query: 557 GILGCRLAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTP 378 G+ G RL V L ++ + S +A A+ +VPS+ R ++D +T VTP Sbjct: 178 GVAGLRLDCDTNTVNLARESSADGADSGSAQTGASVQLAVPSSTRPLTSVDGQLTSPVTP 237 Query: 377 PPAADAGAS 351 P DAG S Sbjct: 238 SP--DAGIS 244
>IBRD3_HUMAN (Q6ZMZ0) IBR domain-containing protein 3| Length = 486 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -2 Query: 365 DAGASELQLCPVCLAKPRDMAFG-CGHQTCSGCGPQVADCPICRRPI 228 ++G +++ CP C A M G C H TC+ CG + C +C + I Sbjct: 176 ESGPDDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEF--CWLCMKEI 220
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVAD----CPICR 237 C +C+ D+ C H C C + +D CPICR Sbjct: 155 CCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVAD----CPICR 237 C +C+ D+ C H C C + +D CPICR Sbjct: 155 CCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVAD----CPICR 237 C +C+ D+ C H C C + +D CPICR Sbjct: 155 CCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICR 192
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Frame = -2 Query: 338 CPVCLAKPRDMAFGCGHQTCSGCGPQVAD----CPICR 237 C +C+ D+ C H C C + +D CPICR Sbjct: 155 CCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICR 192
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 30.8 bits (68), Expect = 4.1 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 8/46 (17%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGCGPQVA-------DCPICRRPID 225 CP+CL ++ + CGH C GC ++ CP+C + +D Sbjct: 16 CPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVD 61
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 30.8 bits (68), Expect = 4.1 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 8/46 (17%) Frame = -2 Query: 338 CPVCLAKPRD-MAFGCGHQTCSGCGPQVA-------DCPICRRPID 225 CP+CL ++ + CGH C GC ++ CP+C + +D Sbjct: 16 CPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVD 61
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 30.8 bits (68), Expect = 4.1 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Frame = -2 Query: 545 CRLAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVT----- 381 CR S + P + + P R+++ SV S L E+++ T S+ Sbjct: 57 CRTPSSSSTLAYSPRDEEDSMPPISTPRRSDSAISVRS-LHSESSMSLRSTFSLPEEEEE 115 Query: 380 PPPAADAGASELQLC-PVCLAKPRDMAFG-CGHQTCSGCGPQVADCPI 243 P P A ++LC +C + +D CGH C C + CP+ Sbjct: 116 PEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPV 163
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 30.8 bits (68), Expect = 4.1 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = -2 Query: 338 CPVCLA-KPRDMAFGCGHQTCSGCGPQVADCPICR 237 C +C K + CGH +C C ++ CPIC+ Sbjct: 163 CKICFTNKITKVLIPCGHSSCYECVFKLQTCPICK 197
>TRI34_MOUSE (Q99PP6) Tripartite motif protein 34| Length = 485 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 14/57 (24%) Frame = -2 Query: 368 ADAGASELQ---LCPVCLAK-PRDMAFGCGHQTCSGC----------GPQVADCPIC 240 A G + +Q CPVC + ++ GCGH+ C C + + CP+C Sbjct: 2 ASTGLTNIQEKTTCPVCQELLTKALSLGCGHRVCQACLITKKNAVINPREKSSCPVC 58
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -2 Query: 365 DAGASELQLCPVCLAKPRD-MAFGCGHQTCSGC----GPQVADCPICRRPIDTRVKLY 207 + S LC +CL + R A CGH C C A+CP+CR + +Y Sbjct: 264 ERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIY 321
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -2 Query: 365 DAGASELQLCPVCLAKPRD-MAFGCGHQTCSGC----GPQVADCPICRRPIDTRVKLY 207 + S LC +CL + R A CGH C C A+CP+CR + +Y Sbjct: 264 ERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIY 321
>Y726_METJA (Q58136) Hypothetical protein MJ0726| Length = 216 Score = 30.4 bits (67), Expect = 5.4 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 9/81 (11%) Frame = -2 Query: 425 REEATLDSTITLS----VTPPPAADAGASELQLCPVCLAKPRDMAFGC-----GHQTCSG 273 +++ +DS + L + P DA +++ V L +++ GC + C+G Sbjct: 115 KDKEIVDSYLILKPYEVIAGKPIIDA---YMKVNDVLLTSNKELCLGCDDKPINDEFCTG 171 Query: 272 CGPQVADCPICRRPIDTRVKL 210 CG VA CP ID + K+ Sbjct: 172 CGTCVAKCPANALTIDEKPKV 192
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 30.4 bits (67), Expect = 5.4 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 11/48 (22%) Frame = -2 Query: 341 LCPVCLAKPRD-MAFGCGHQTCSGCGPQVAD----------CPICRRP 231 +CP+C ++ ++ CGH C C Q + CP+CR+P Sbjct: 13 VCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCCPLCRKP 60
>MDM4_HUMAN (O15151) Mdm4 protein (p53-binding protein Mdm4) (Mdm2-like| p53-binding protein) (Mdmx protein) (Double minute 4 protein) Length = 490 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Frame = -2 Query: 347 LQLCPVCLAKPRD---MAFGCGHQ-TCSGCGPQV----ADCPICRRPIDTRVKLY 207 L+ C +C +PRD + GH TC C ++ A CPIC++ I +K++ Sbjct: 434 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVF 488
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 30.4 bits (67), Expect = 5.4 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = -2 Query: 380 PPPAADAGASELQLCPVCLAKPRDMAF--GCGHQTCSGCGPQVAD----CPICRR 234 PP + + CP+CL + ++ C H C GC + CP+C R Sbjct: 150 PPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMCGR 204
>EPHAA_HUMAN (Q5JZY3) Ephrin type-A receptor 10 precursor (EC 2.7.10.1)| Length = 1008 Score = 30.4 bits (67), Expect = 5.4 Identities = 27/100 (27%), Positives = 36/100 (36%) Frame = -2 Query: 545 CRLAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAA 366 C S R P PP AS S P +L+ + + PPA Sbjct: 316 CVCQDSYARSPTDPPSASCTRPP-----------SAPRDLQYSLSRSPLVLRLRWLPPAD 364 Query: 365 DAGASELQLCPVCLAKPRDMAFGCGHQTCSGCGPQVADCP 246 G S++ +CL R+ G C CGP+VA P Sbjct: 365 SGGRSDVTYSLLCLRCGREGPAGA----CEPCGPRVAFLP 400
>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 768 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 13/56 (23%) Frame = -2 Query: 335 PVCLAKPRDMAFGCGHQTCSGCGPQV--ADCPICRRP-----------IDTRVKLY 207 PVCL GC H CSGC + CP+C P +D+ ++LY Sbjct: 54 PVCLG-------GCEHIFCSGCISDCVGSGCPVCHTPAWILDLKINRQLDSMIQLY 102
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 30.0 bits (66), Expect = 7.0 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = -2 Query: 377 PPAADAGASELQLCPVCLAKPRD-MAFGCGH-QTCSGCGPQV-ADCPICRRPIDTRVKLY 207 P A AG+ L+ C VCL + RD + C H C C + CP CR+ + +K++ Sbjct: 215 PAPAFAGSEALE-CKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTCRQDVADFIKIF 273
>ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory protein (Leucine| repeat protein) (VSG expression site-associated protein F14.9) Length = 630 Score = 30.0 bits (66), Expect = 7.0 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = -2 Query: 359 GASELQLCPVCLAKPRDMA---FGCGHQTCSGCGPQVADCPICRRPIDTRVKLY*QPHM 192 G S +C VC + A C H C+ C Q CP C+R I R K PH+ Sbjct: 3 GRSTYGMCAVCREPWAEGAVELLPCRHVFCTACVVQRWRCPSCQRRIGGRRKA--NPHL 59
>ESA8C_TRYEQ (P26337) Putative adenylate cyclase regulatory protein| Length = 630 Score = 30.0 bits (66), Expect = 7.0 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = -2 Query: 359 GASELQLCPVCLAKPRDMA---FGCGHQTCSGCGPQVADCPICRRPIDTRVKLY*QPHM 192 G S +C VC + A F C H C+ C + CP C+R I R K PH+ Sbjct: 3 GRSTYGMCAVCREPWAEGALELFPCRHVFCTVCVVERWRCPSCQRRIGGRRKA--NPHL 59
>MSN5_YEAST (P52918) Protein MSN5| Length = 1224 Score = 30.0 bits (66), Expect = 7.0 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = +3 Query: 162 SNVLQSNLVRHV-RLLV*FYSCINWPSTDGAIR-DLRSTP*TSLMTTTKCHIP 314 +N LQ N ++ RLL +C+NWP T+ +R D+ S SL+T +IP Sbjct: 229 NNALQQNNSEYIIRLLETLKTCLNWPLTEVIVRNDVLS----SLLTCLSSNIP 277
>YXDF_LACLA (Q9CDG9) Hypothetical UPF0177 protein yxdF| Length = 177 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +3 Query: 48 IIFSTVQATVQTEFFSFPWILLPTLQSSFLFPRFYFKHSNVLQSNLV 188 +I S + A V T F W LLP L SF+ Y K +N ++S +V Sbjct: 110 LISSVLFALVHT---GFSWYLLPYLILSFIITWVYSKRNNFIESAIV 153
>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A);| Movement protein (2B-MP); Coat protein (2C-CP)] Length = 1101 Score = 30.0 bits (66), Expect = 7.0 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -2 Query: 548 GCR--LAKSPERVPLPPPFASYNSTSRAAPYRANNFRSV 438 GCR + P R+P PPP + AP+ NNFR V Sbjct: 144 GCRYNVVAPPPRIPQPPPLPKF------APFVRNNFRVV 176
>MARK2_RAT (O08679) Serine/threonine-protein kinase MARK2 (EC 2.7.11.1)| (MAP/microtubule affinity-regulating kinase 2) (ELKL Motif Kinase) (EMK1) Length = 722 Score = 30.0 bits (66), Expect = 7.0 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -2 Query: 587 PLQYKATL-QLGILGCRLAKSPERVPLPPPFASYNSTSRAAPYRANNFRSVPS 432 PL +A+L Q I + + +P+RVP+ P A S+S AP R N R V S Sbjct: 484 PLLDRASLGQASIQNGKDSTAPQRVPVASPSAHNISSSSGAPDRTNFPRGVSS 536
>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier| family 7 member 3) (Cationic amino acid transporter y+) Length = 618 Score = 30.0 bits (66), Expect = 7.0 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +2 Query: 503 EEEVELAQETLQVDTPVFQAVMLLCTAKVFP*VLKGQTLSPC 628 EEE+EL +ETL+ + QA L C P +L G+ + C Sbjct: 440 EEEMELQEETLEAEKLTVQA--LFCPVNSIPTLLSGRVVYVC 479
>PDLI4_HUMAN (P50479) PDZ and LIM domain protein 4 (LIM protein RIL)| (Reversion-induced LIM protein) Length = 330 Score = 29.6 bits (65), Expect = 9.1 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -2 Query: 479 SRAAPYRANNFRSVPSNLREEATLDSTI-TLSVTPPPAAD 363 S +PY VP N EATL + + TL V+PPP+AD Sbjct: 132 SLGSPYGQPPRFPVPHNGSSEATLPAQMSTLHVSPPPSAD 171
>Y830_PASMU (Q9CMJ4) UPF0266 membrane protein PM0830| Length = 152 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/63 (23%), Positives = 33/63 (52%) Frame = +3 Query: 21 SNI*QYTIVIIFSTVQATVQTEFFSFPWILLPTLQSSFLFPRFYFKHSNVLQSNLVRHVR 200 +N+ T+ ++ + + +V F P +LL + F F YF+++++ Q NL + Sbjct: 63 TNLSSATLYLLTALILLSVYAAFIRAPMLLLK--EKGFFFGNIYFQYADIHQVNLAENNI 120 Query: 201 LLV 209 L++ Sbjct: 121 LVI 123
>EGLN_PIG (P37176) Endoglin precursor| Length = 653 Score = 29.6 bits (65), Expect = 9.1 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 3/145 (2%) Frame = -2 Query: 677 QFVNFTGIMSKKISQSNKETEFALSALMEIPLQYKATLQLGILGCRLAKSPERVPLPPPF 498 Q VN + ++ K +++ +E+PL +LQ G L SP V + PP Sbjct: 287 QGVNLPDTRQGLLEEARKLNASVIASFVELPLASVISLQDRSCGSGLQPSPTTVQITPPG 346 Query: 497 ASYNSTSRAAPYRANNFRSVPSNLREEATLDSTITLSVTPPPAADAGASELQLC---PVC 327 N + + +L + D +TL + + G + L P C Sbjct: 347 EGCN-------------QDLLLSLIQPRCSDDVMTLVLRKDLISTLGCTITSLTFWDPSC 393 Query: 326 LAKPRDMAFGCGHQTCSGCGPQVAD 252 A+ D F T S CG +VA+ Sbjct: 394 QAEDTDDKFVL-RGTYSSCGMKVAE 417
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Frame = -2 Query: 347 LQLCPVCLAKPRDMAF-GCGHQTCSGC-----GPQVADCPICRRPID 225 L LC VC + ++ GCGH C+ C ++ CP C + D Sbjct: 652 LVLCSVCRSNFKNTILKGCGHVFCNECVDNRLANRMRKCPSCNKAFD 698 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,541,146 Number of Sequences: 219361 Number of extensions: 2092372 Number of successful extensions: 6567 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 6230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6558 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
