ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15c24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger prot... 100 4e-21
2ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing ... 100 6e-21
3Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2... 99 1e-20
4Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2... 99 1e-20
5ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing ... 98 2e-20
6ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing ... 94 4e-19
7ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expres... 47 4e-05
8ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expr... 47 4e-05
9ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog 45 2e-04
10ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expr... 44 3e-04
11MSTAA_DROME (O46040) Protein msta, isoform A 32 1.5
12SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated ... 32 1.9
13ECAR_ECHCA (Q90495) Ecarin precursor (EC 3.4.24.-) 31 2.5
14PEP7_YEAST (P32609) Vacuolar segregation protein PEP7 (Protein V... 31 2.5
15SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.... 30 4.3
16MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-... 30 5.6
17TBCE_BOVIN (Q32KS0) Tubulin-specific chaperone E (Tubulin-foldin... 30 5.6
18MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-... 30 5.6
19RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3 30 5.6
20RVXX_VIPLE (Q7T046) Coagulation factor X-activating enzyme heavy... 30 5.6
21Y455_METJA (Q57897) Hypothetical protein MJ0455 30 7.3
22LRP1_CHICK (P98157) Low-density lipoprotein receptor-related pro... 30 7.3
23HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-) 30 7.3
24DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila D... 27 8.9
25TBCE_RAT (Q5FVQ9) Tubulin-specific chaperone E (Tubulin-folding ... 29 9.6
26HM14_CAEEL (P20271) Homeobox protein ceh-14 29 9.6
27ERBB2_CANFA (O18735) Receptor tyrosine-protein kinase erbB-2 pre... 29 9.6
28IF37_SCHPO (O94236) Eukaryotic translation initiation factor 3 s... 29 9.6
29ERBB2_HUMAN (P04626) Receptor tyrosine-protein kinase erbB-2 pre... 29 9.6
30ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B 29 9.6
31LCE1D_HUMAN (Q5T752) Late cornified envelope protein 1D (Late en... 29 9.6
32ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 pre... 29 9.6
33ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precu... 29 9.6

>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1|
           (Stress-associated protein 1) (OsISAP1)
          Length = 164

 Score =  100 bits (248), Expect = 4e-21
 Identities = 49/85 (57%), Positives = 60/85 (70%)
 Frame = -1

Query: 495 AKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHE 316
           A AL TA PA +A  S          +RCS CRKRVGLTGF CRCG+L+C  HRYSD+H 
Sbjct: 86  ASALATA-PAPVAKTSAV--------NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHG 136

Query: 315 CKFDYRAAAMDAIAKANPVVKAEKL 241
           C +DY++AA DAIA+ NPVV+A K+
Sbjct: 137 CSYDYKSAARDAIARDNPVVRAAKI 161



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>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein|
           At1g12440
          Length = 168

 Score = 99.8 bits (247), Expect = 6e-21
 Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
 Frame = -1

Query: 456 GPSEAA-MESPKGPS-RCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMD 283
           G S AA ++ PK  + RC +C K+VG+TGF CRCG+ +C THRY + HEC+FD++  A +
Sbjct: 92  GDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVARE 151

Query: 282 AIAKANPVVKAEKLDKI 232
           AIAKANPVVKA+K+D+I
Sbjct: 152 AIAKANPVVKADKVDRI 168



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>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
 Frame = -1

Query: 495 AKALITAQPADIAGPS-----EAAMESPKGP-SRCSTCRKRVGLTGFNCRCGNLYCATHR 334
           ++ ++T     ++ PS     E A E PK   +RC  CRK+VGLTGF+CRCGNL+C  HR
Sbjct: 120 SEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHR 179

Query: 333 YSDKHECKFDYRAAAMDAIAKANPVVKAEKLDKI 232
           YSDKH C +DY+A A   I K NPVV AEK+ +I
Sbjct: 180 YSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



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>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
 Frame = -1

Query: 495 AKALITAQPADIAGPS-----EAAMESPKGP-SRCSTCRKRVGLTGFNCRCGNLYCATHR 334
           ++ ++T     ++ PS     E A E PK   +RC  CRK+VGLTGF+CRCGNL+C  HR
Sbjct: 120 SEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHR 179

Query: 333 YSDKHECKFDYRAAAMDAIAKANPVVKAEKLDKI 232
           YSDKH C +DY+A A   I K NPVV AEK+ +I
Sbjct: 180 YSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



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>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 42/96 (43%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
 Frame = -1

Query: 507 AHVQAKALITAQPADIAGPSEAAMESPKGP----SRCSTCRKRVGLTGFNCRCGNLYCAT 340
           AH++   ++TA+P+ +   +E     P  P    +RC +C K+VG+ GF C+CG+ +C +
Sbjct: 81  AHLET-VVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGS 139

Query: 339 HRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLDKI 232
           HRY +KHEC FD++    DAIAKANP+VKA+K+ +I
Sbjct: 140 HRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175



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>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein|
           At2g36320
          Length = 161

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = -1

Query: 429 PKGPSRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKA 250
           P+ P+RC+ CRKRVGLTGF CRCG  +C +HRY + H C FD+++A  + IAKANP+V A
Sbjct: 96  PQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIA 155

Query: 249 EKLDKI 232
            KL KI
Sbjct: 156 AKLQKI 161



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>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = -1

Query: 453 PSEAAMESPKGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMD 283
           P E+     K   RC  C+ ++ L      +CRCG ++C  HR  ++H+C FD+      
Sbjct: 143 PEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR--- 199

Query: 282 AIAKANPVVKAEKLDKI*ERVGKT 211
              +   ++K  KLD+   +VG++
Sbjct: 200 --GREEAIMKMVKLDR---KVGRS 218



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>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = -1

Query: 453 PSEAAMESPKGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMD 283
           P E+     K   RC  C+ ++ L      +CRCG ++C  HR  ++H+C FD+      
Sbjct: 143 PEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR--- 199

Query: 282 AIAKANPVVKAEKLDKI*ERVGKT 211
              +   ++K  KLD+   +VG++
Sbjct: 200 --GREEAIMKMVKLDR---KVGRS 218



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>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog|
          Length = 226

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = -1

Query: 453 PSEAAMESPKGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMD 283
           P  ++    K   RC  C+ ++ L      +CRCG ++C  HR  ++H+C FD+      
Sbjct: 142 PDNSSRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR--- 198

Query: 282 AIAKANPVVKAEKLDKI*ERVGKT 211
              +   ++K  KLD+   +VG++
Sbjct: 199 --GREEAIMKMVKLDR---KVGRS 217



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>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -1

Query: 447 EAAMESPKGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDYRAAAMDAI 277
           E +    K   RC  C+ ++ L      +CRCG ++C  HR  ++H+C FD+        
Sbjct: 145 ETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR----- 199

Query: 276 AKANPVVKAEKLDKI*ERVGKT 211
            +   ++K  KLD+   +VG++
Sbjct: 200 GREEAIMKMVKLDR---KVGRS 218



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>MSTAA_DROME (O46040) Protein msta, isoform A|
          Length = 462

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = -1

Query: 549 VKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMESPKGP-SRCSTCRKRVGLTGF 373
           +     AG    A   + A  LI  + A + GP+     + KG  S C  C + +  TGF
Sbjct: 59  ISSSTVAGRGVFATRDIAAGELIFQERALVTGPT-----ARKGQLSSCICCHETLPQTGF 113

Query: 372 NC--RCGNLYCATHRYSDKHECKFDY 301
            C  RC    C T   S++H+ + ++
Sbjct: 114 LCRHRCTLPVCETCSDSEEHQAECEH 139



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>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein|
           1)
          Length = 614

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 457 WSQRGGHGEPQRPKPVQHLQKEGR 386
           WSQ  GHGEPQ P+ + HL++ GR
Sbjct: 208 WSQELGHGEPQ-PQSLLHLRQVGR 230



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>ECAR_ECHCA (Q90495) Ecarin precursor (EC 3.4.24.-)|
          Length = 616

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
 Frame = -1

Query: 402 CRKRVGLTG--FNC-----RCGNLYCATHRYSDKHECKFDYRAA 292
           C K +G  G  F C     +CG LYC  + +     CK DY  A
Sbjct: 542 CTKEIGYYGKRFPCAPQDVKCGRLYCLDNSFKKNMRCKNDYSYA 585



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>PEP7_YEAST (P32609) Vacuolar segregation protein PEP7 (Protein VAC1) (Vacuolar|
           protein sorting 19)
          Length = 515

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = -1

Query: 426 KGPSRCSTCRKRVG--LTGFNCR-CGNLYCATH 337
           KG S C TC + +   +   NCR CG LYC  H
Sbjct: 73  KGKSCCHTCGRTLNNNIGAINCRKCGKLYCRRH 105



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>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in|
           absentia homolog 1)
          Length = 305

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 26/98 (26%)
 Frame = -1

Query: 561 GGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMES---------------- 430
           GG A+KE L + ST V      AK    ++P      S     S                
Sbjct: 4   GGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNL 63

Query: 429 --------PKGPSRCSTCRKRVGLTGFNCR--CGNLYC 346
                   P G + CS+C+ RV  T   CR   GN+ C
Sbjct: 64  MYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRC 101



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>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2)
          Length = 414

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 535 CCWQHSGGSCSRSGEGADHRTAC*HRWSQRGGHGEPQRPKPVQHLQKEG 389
           CC +   G  +  G GA   +A      ++GG G    P PV  +++EG
Sbjct: 10  CCPEQEEGESAAGGSGAGGDSAI-----EQGGQGSALAPSPVSGVRREG 53



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>TBCE_BOVIN (Q32KS0) Tubulin-specific chaperone E (Tubulin-folding cofactor E)|
          Length = 528

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 502 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 413
           R G   D+R A  + W + GGH +P++ +P
Sbjct: 379 RRGAELDYRKAFGNEWKKAGGHQDPEKNRP 408



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>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 535 CCWQHSGGSCSRSGEGADHRTAC*HRWSQRGGHGEPQRPKPVQHLQKEG 389
           CC +   G  +  G GA   +A      ++GG G    P PV  +++EG
Sbjct: 10  CCPEQEEGESAAGGSGAGGDSAI-----EQGGQGSALAPSPVSGVRREG 53



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>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3|
          Length = 228

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = -1

Query: 615 MKQEQAKLAASSFDSIVNGGDAVKEHLAAG----STAVAVAHVQAKALITAQPADIAGPS 448
           +K ++AK        +++ GDAVK+++  G     T   V  +Q + ++   P  + GP+
Sbjct: 153 LKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPN 212



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>RVXX_VIPLE (Q7T046) Coagulation factor X-activating enzyme heavy chain|
           precursor (EC 3.4.24.58) (VLFXA heavy chain)
           (Coagulation factor X-activating enzyme alpha-chain)
           [Contains: Coagulation factor X-activating enzyme heavy
           chain alternate form]
          Length = 612

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 435 ESPKGPSRCSTCRKRVG----LTGFNCRCGNLYCATHRYSDKHECKFDYR 298
           E+ KG S    CRK  G        + +CG LYC  +   +K+ CK  YR
Sbjct: 530 ENQKG-SYYGYCRKENGRKIPCAPQDIKCGRLYCLDNSPGNKNPCKMHYR 578



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>Y455_METJA (Q57897) Hypothetical protein MJ0455|
          Length = 193

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 18/79 (22%), Positives = 40/79 (50%)
 Frame = -1

Query: 414 RCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFDYRAAAMDAIAKANPVVKAEKLDK 235
           +CS C K++  TG +C+       T +  ++++ + + + A + A  +A   +K  +L++
Sbjct: 2   KCSQCNKKLCYTGKDCKKD----ITQKIIEEYKKEENLKIAEVSAYIEATYYMKKTRLEE 57

Query: 234 I*ERVGKTEGPKINLRYLV 178
           I E     E  KI + + +
Sbjct: 58  IIEFCKLMEYKKIGIAFCI 76



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>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -1

Query: 516  VAVAHVQAKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVGLTGFNCRCGNLYCATH 337
            +AVA+      ++    +  G  +  + +PKG   CS   +RV    F C+  N  C  H
Sbjct: 2462 IAVANDTDSCELSPCRVNNGGCQDLCLLTPKGHVNCSCRGERVLQEDFTCKALNSTCNVH 2521

Query: 336  RYSDKHEC 313
               D+ EC
Sbjct: 2522 ---DEFEC 2526



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>HELS_METTH (O26901) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 690

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 203 PKSICATSSSCVFAALSFHHAGFCN 129
           P S C   + C+ A ++FHHAG  N
Sbjct: 278 PTSTCLKLAECLEAGIAFHHAGLFN 302



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>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog|
           4)
          Length = 686

 Score = 26.6 bits (57), Expect(2) = 8.9
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 426 KGPSRCSTCRKRVGLTGFNCRCGNLYCA 343
           +GPSR  TCR R G TG +C      CA
Sbjct: 421 RGPSR--TCRCRPGFTGTHCELHISDCA 446



 Score = 21.2 bits (43), Expect(2) = 8.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 541 APCCWQHSGGSCSRSGEGADHRTAC 467
           +PC    +GGSC    +G+ +   C
Sbjct: 370 SPC---FNGGSCRERNQGSSYACEC 391



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>TBCE_RAT (Q5FVQ9) Tubulin-specific chaperone E (Tubulin-folding cofactor E)|
          Length = 524

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 502 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 413
           R G   D+R A    W + GGH +P R +P
Sbjct: 375 RRGAELDYRKAFGKEWRKAGGHPDPDRNRP 404



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>HM14_CAEEL (P20271) Homeobox protein ceh-14|
          Length = 351

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 414 RCSTCRKRVGLTGFNCRCGNLYCATHRY 331
           RCSTC+  +G T F  R  ++YC  H Y
Sbjct: 74  RCSTCKDELGATCF-LREDSMYCRAHFY 100



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>ERBB2_CANFA (O18735) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2)
          Length = 1259

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 179 SSCVFAALSFHHAGFCNLSCWAIVMHGT 96
           S C+ A L F+H+G C L C A+V + T
Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNT 276



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>IF37_SCHPO (O94236) Eukaryotic translation initiation factor 3 subunit 7|
           homolog (Microtubule-destabilizing protein moe1)
          Length = 567

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = -1

Query: 615 MKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAM 436
           MK    KLA  + ++++ G D++K    + S A    H     ++  +PAD+A     ++
Sbjct: 451 MKNNSCKLARWTVEALLAGVDSMKVGFVSRSNARDAQHHGILGVVAYKPADLASQMNLSL 510

Query: 435 ESPKG 421
            +  G
Sbjct: 511 SNGWG 515



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>ERBB2_HUMAN (P04626) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
           (Tyrosine kinase-type cell surface receptor HER2) (MLN
           19)
          Length = 1255

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 179 SSCVFAALSFHHAGFCNLSCWAIVMHGT 96
           S C+ A L F+H+G C L C A+V + T
Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNT 276



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>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B|
          Length = 257

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 408 STCRKRVGLTGFNCRCGNLYCATHRYSDKHEC 313
           S CR+R  +     RCG  +C  HR+   HEC
Sbjct: 103 SGCRQREMMKLTCDRCGRNFCIKHRHPLDHEC 134



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>LCE1D_HUMAN (Q5T752) Late cornified envelope protein 1D (Late envelope protein|
           4)
          Length = 114

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 574 QHRQRWRCGERAPCCWQHSGGSCSRSGEGADHRTAC 467
           +HR   R  + + CC Q SGGS    G  + H   C
Sbjct: 78  RHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGC 113



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>ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
          Length = 1254

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 179 SSCVFAALSFHHAGFCNLSCWAIVMHGT 96
           S C+ A L F+H+G C L C A+V + T
Sbjct: 250 SDCL-ACLHFNHSGICELHCPALVTYNT 276



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>ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
           (Epidermal growth factor receptor-related protein)
          Length = 1257

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 179 SSCVFAALSFHHAGFCNLSCWAIVMHGT 96
           S C+ A L F+H+G C L C A+V + T
Sbjct: 251 SDCL-ACLHFNHSGICELHCPALVTYNT 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,883,451
Number of Sequences: 219361
Number of extensions: 1434557
Number of successful extensions: 4570
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4565
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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