ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14n19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) 97 7e-21
2ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced pro... 49 2e-10
3ERD14_ARATH (P42763) Dehydrin ERD14 51 2e-10
4COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein) 45 4e-09
5ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44 44 2e-07
6CS66_WHEAT (P46526) Cold shock protein CS66 40 5e-05
7DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein) 38 5e-05
8CS120_WHEAT (P46525) Cold-shock protein CS120 37 1e-04
9ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40) 35 2e-04
10DHR15_WHEAT (Q00742) Dehydrin Rab15 35 3e-04
11XERO1_ARATH (P25863) Dehydrin Xero 1 37 7e-04
12DH16B_ORYSA (P22911) Dehydrin Rab16B 35 0.003
13DHR25_ORYSA (P30287) Dehydrin Rab25 (Drought-resistant protein 1... 33 0.005
14DHR18_ARATH (P30185) Dehydrin Rab18 32 0.007
15DHN1_HORVU (P12951) Dehydrin DHN1 (B8) 33 0.012
16XERO2_ARATH (P42758) Dehydrin Xero 2 (Low-temperature-induced pr... 33 0.019
17DHLEA_ARATH (Q96261) Probable dehydrin LEA 33 0.020
18DHA_CRAPL (P22238) Desiccation-related protein clone PCC27-04 35 0.13
19DHN1_PEA (P28639) Dehydrin DHN1 32 0.25
20DHB_CRAPL (P22239) Desiccation-related protein clone PCC6-19 (CD... 35 0.31
21DH16C_ORYSA (P22912) Dehydrin Rab16C 35 0.31
22DHLE_RAPSA (P21298) Late embryogenesis abundant protein (Protein... 35 0.31
23DHN2_HORVU (P12952) Dehydrin DHN2 (B9) 33 0.70
24DHN4_HORVU (P12949) Dehydrin DHN4 (B18) 33 0.91
25DHR21_ORYSA (P12253) Water stress-inducible protein Rab21 33 0.91
26DHN3_HORVU (P12948) Dehydrin DHN3 (B17) 32 1.6
27DH16D_ORYSA (P22913) Dehydrin Rab16D 32 1.6
28TAS14_LYCES (P22240) Abscisic acid and environmental stress-indu... 32 2.0
29DHN2_PEA (P28640) Dehydrin DHN2 32 2.0
30DHN3_PEA (P28641) Dehydrin DHN3 31 3.5
31PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 31 4.5
32ITA7_HUMAN (Q13683) Integrin alpha-7 precursor [Contains: Integr... 30 7.7

>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 96.7 bits (239), Expect = 7e-20
 Identities = 66/152 (43%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
 Frame = -3

Query: 712 PATRTTKA*HVTGLPATDGPRVCSD--SPMTPNVVREKIDGDAKTEATPG----SARGGE 551
           P  + T+  HVTGLPA   P            +VV EKIDGD KTEA P       +G  
Sbjct: 121 PGHKDTEGEHVTGLPAPAAPASVQTHGGHHDTDVVVEKIDGDVKTEAAPAVPEEEKKGFL 180

Query: 550 ERLLGKDQGEAARRPQEAGG-----RCRGARHAPLXXXXXXXXXXXXXXXXXXXRKEKKG 386
           E++  K  G   ++P++A             HAP+                    KEKKG
Sbjct: 181 EKIKEKLPG-GHKKPEDAAAVPVTHAAPAPVHAPVPAPEEVSSPDA---------KEKKG 230

Query: 385 LLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA 290
           LLGKIMDKLPGYHKTGEEDKAAA +GEHKP A
Sbjct: 231 LLGKIMDKLPGYHKTGEEDKAAAATGEHKPSA 262



 Score = 90.5 bits (223), Expect(2) = 7e-21
 Identities = 48/70 (68%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = -1

Query: 669 PPPMAPASVQTHP*HRTS--FVRRSTATRKQRPHRAVPEEEKKGFLEKIKEKLPGGHKKP 496
           P P APASVQTH  H  +   V +     K     AVPEEEKKGFLEKIKEKLPGGHKKP
Sbjct: 135 PAPAAPASVQTHGGHHDTDVVVEKIDGDVKTEAAPAVPEEEKKGFLEKIKEKLPGGHKKP 194

Query: 495 EDAAAVPVTH 466
           EDAAAVPVTH
Sbjct: 195 EDAAAVPVTH 204



 Score = 30.0 bits (66), Expect(2) = 7e-21
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 734 EKLKXKLPGHKDNEG 690
           EKL+ KLPGHKD EG
Sbjct: 114 EKLQGKLPGHKDTEG 128



to top

>ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced protein LTI45)|
          Length = 260

 Score = 48.5 bits (114), Expect(2) = 2e-10
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -1

Query: 561 EEEKKGFLEKIKEKLPGGHKKPEDAAAVPVT 469
           EEEKKGF++KIKEKLPG  KKPED+  V  T
Sbjct: 184 EEEKKGFMDKIKEKLPGHSKKPEDSQVVNTT 214



 Score = 37.7 bits (86), Expect = 0.037
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 558 EEKKGFLEKIKEKLPGGHKK 499
           EEKKGF++KIKEKLPG H K
Sbjct: 228 EEKKGFMDKIKEKLPGYHAK 247



 Score = 37.0 bits (84), Expect(2) = 2e-10
 Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYH--KTGEEDK 326
           +EKKG + KI +KLPGYH   TGEE+K
Sbjct: 228 EEKKGFMDKIKEKLPGYHAKTTGEEEK 254



 Score = 30.4 bits (67), Expect(2) = 0.003
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 576 HRAVPEEEKKGFLEKIKEKLPGGHKKPEDAAAVPVT 469
           H    EEE +G +++IKEK P G K   D   V  T
Sbjct: 135 HVKTVEEENQGVMDRIKEKFPLGEKPGGDDVPVVTT 170



 Score = 30.0 bits (66), Expect(2) = 0.003
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYHKTGEEDK 326
           +EKKG + KI +KLPG+ K  E+ +
Sbjct: 185 EEKKGFMDKIKEKLPGHSKKPEDSQ 209



to top

>ERD14_ARATH (P42763) Dehydrin ERD14|
          Length = 185

 Score = 51.2 bits (121), Expect(2) = 2e-10
 Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
 Frame = -1

Query: 609 RRSTATRKQRPHRAVP--EEEKKGFLEKIKEKLPGGHKKPEDAAAV 478
           +R     K++P   V   EEEKKGF+EK+KEKLP GHKKPED +AV
Sbjct: 94  KRKKKKEKKKPTTEVEVKEEEKKGFMEKLKEKLP-GHKKPEDGSAV 138



 Score = 35.4 bits (80), Expect = 0.18
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGHKK 499
           EKKG LEKIKEKLPG H K
Sbjct: 156 EKKGILEKIKEKLPGYHPK 174



 Score = 34.3 bits (77), Expect(2) = 2e-10
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH--KTGEEDK 326
           EKKG+L KI +KLPGYH   T EE+K
Sbjct: 156 EKKGILEKIKEKLPGYHPKTTVEEEK 181



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPETH 263
           +EKKG + K+ +KLPG HK  E+  A A +    P    PP  E H
Sbjct: 113 EEKKGFMEKLKEKLPG-HKKPEDGSAVAAA----PVVVPPPVEEAH 153



to top

>COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein)|
          Length = 265

 Score = 45.1 bits (105), Expect(2) = 4e-09
 Identities = 23/33 (69%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
 Frame = -1

Query: 564 PEEEKKGFLEKIKEKLPGGH-KKPEDAAAVPVT 469
           PEEEKKG +EKIKEKLPG H +K ED+ AV  T
Sbjct: 179 PEEEKKGLVEKIKEKLPGHHDEKAEDSPAVTST 211



 Score = 38.9 bits (89), Expect(2) = 4e-07
 Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -1

Query: 591 RKQRPHRAVP-EEEKKGFLEKIKEKLPGGH-KKPEDAAAVPVT 469
           +K++  + V  EE+KKG +EKIKEKLPG H K  ED   V  T
Sbjct: 122 KKEKKKKIVEGEEDKKGLVEKIKEKLPGHHDKTAEDDVPVSTT 164



 Score = 37.4 bits (85), Expect(2) = 4e-04
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = -1

Query: 558 EEKKGFLEKIKEKLPGGHKK 499
           EEKKG LEKIKEKLPG H K
Sbjct: 232 EEKKGILEKIKEKLPGYHAK 251



 Score = 35.8 bits (81), Expect(2) = 4e-09
 Identities = 17/25 (68%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYH-KTGEED 329
           +EKKG+L KI +KLPGYH KT EE+
Sbjct: 232 EEKKGILEKIKEKLPGYHAKTTEEE 256



 Score = 35.0 bits (79), Expect(2) = 4e-07
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPS 311
           +EKKGL+ KI +KLPG+H    ED  A  S
Sbjct: 181 EEKKGLVEKIKEKLPGHHDEKAEDSPAVTS 210



 Score = 33.5 bits (75), Expect = 0.70
 Identities = 15/25 (60%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYH-KTGEED 329
           ++KKGL+ KI +KLPG+H KT E+D
Sbjct: 134 EDKKGLVEKIKEKLPGHHDKTAEDD 158



 Score = 26.2 bits (56), Expect(2) = 4e-04
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 734 EKLKXKLPGHKDNEGXARDGP 672
           EK+K KLPGH D +  A D P
Sbjct: 188 EKIKEKLPGHHDEK--AEDSP 206



to top

>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44|
          Length = 258

 Score = 43.5 bits (101), Expect(2) = 2e-07
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -1

Query: 558 EEKKGFLEKIKEKLPGGHKKPEDAAAVP 475
           E+KKGF+EKIKEKLPGG KK E+    P
Sbjct: 136 EKKKGFMEKIKEKLPGGGKKVEEETVAP 163



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHKK 499
           KKG LEKIKEK+PG H K
Sbjct: 182 KKGILEKIKEKIPGYHPK 199



 Score = 31.6 bits (70), Expect(2) = 2e-07
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -3

Query: 394 KKGLLGKIMDKLPGYH-KTGEEDK 326
           KKG+L KI +K+PGYH KT  E++
Sbjct: 182 KKGILEKIKEKIPGYHPKTSTEEE 205



 Score = 30.4 bits (67), Expect(2) = 0.015
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYHKTGEEDKAAAP 314
           ++KKG + KI +KLPG  K  EE+  A P
Sbjct: 136 EKKKGFMEKIKEKLPGGGKKVEEETVAPP 164



 Score = 27.7 bits (60), Expect(2) = 0.015
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 561 EEEKKGFLEKIKEKLPGGHKKPEDAAAVPV 472
           ++EKKG  EKI+EK+   H K ED  +VPV
Sbjct: 104 KKEKKGLKEKIEEKI---HHKEED-TSVPV 129



to top

>CS66_WHEAT (P46526) Cold shock protein CS66|
          Length = 469

 Score = 39.7 bits (91), Expect(2) = 5e-05
 Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
 Frame = -1

Query: 576 HRAVPEEEKKGFLEKIKEKLPGGHKKPEDAA-----AVPVTH 466
           H+A    EKKG +EKIKEKLPGGH   ++ A     A  VTH
Sbjct: 3   HQAHGAGEKKGIMEKIKEKLPGGHGDHKETAGAHGHAGTVTH 44



 Score = 33.5 bits (75), Expect = 0.70
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG +E IK+KLPGGH
Sbjct: 235 EKKGLMENIKDKLPGGH 251



 Score = 33.1 bits (74), Expect = 0.91
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG +E IK+KLPGGH
Sbjct: 73  EKKGVMENIKDKLPGGH 89



 Score = 32.7 bits (73), Expect(2) = 0.002
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGHKKPEDAA 484
           EKK  +E IKEKLPGGH   +  A
Sbjct: 171 EKKSLMENIKEKLPGGHGDNQQTA 194



 Score = 31.2 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGH 505
           KKG +E IK+KLPGGH
Sbjct: 300 KKGVMENIKDKLPGGH 315



 Score = 30.8 bits (68), Expect = 4.5
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKK  +E IK+KLPGGH
Sbjct: 363 EKKAVMENIKDKLPGGH 379



 Score = 28.5 bits (62), Expect(2) = 0.002
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYHKTGEEDKAAAPSGE 305
           EKKGL+  I DKLPG H  G+  +     G+
Sbjct: 235 EKKGLMENIKDKLPGGH--GDHQQTGGTYGQ 263



 Score = 26.9 bits (58), Expect(2) = 5e-05
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG++  I DKLPG H
Sbjct: 73  EKKGVMENIKDKLPGGH 89



to top

>DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein)|
          Length = 168

 Score = 37.7 bits (86), Expect(2) = 5e-05
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHKKPEDAAA 481
           KKG  EKIKEKLPGGHK  + A A
Sbjct: 94  KKGIKEKIKEKLPGGHKDDQHATA 117



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG ++KIKEKLPG H
Sbjct: 152 EKKGIMDKIKEKLPGQH 168



 Score = 28.9 bits (63), Expect(2) = 5e-05
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG++ KI +KLPG H
Sbjct: 152 EKKGIMDKIKEKLPGQH 168



to top

>CS120_WHEAT (P46525) Cold-shock protein CS120|
          Length = 391

 Score = 37.4 bits (85), Expect(2) = 1e-04
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGHKKPEDAA 484
           EKKG +EKIKEKLPGGH   ++ A
Sbjct: 10  EKKGIMEKIKEKLPGGHGDHKETA 33



 Score = 34.3 bits (77), Expect = 0.41
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG +E IKEKLPGGH
Sbjct: 285 EKKGVMENIKEKLPGGH 301



 Score = 34.3 bits (77), Expect = 0.41
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG +E IKEKLPGGH
Sbjct: 157 EKKGVMENIKEKLPGGH 173



 Score = 33.5 bits (75), Expect = 0.70
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGHK 502
           EKKG +E IK+KLPGGH+
Sbjct: 73  EKKGVMENIKDKLPGGHQ 90



 Score = 33.1 bits (74), Expect = 0.91
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG +E IK+KLPGGH
Sbjct: 221 EKKGVMENIKDKLPGGH 237



 Score = 27.7 bits (60), Expect(2) = 1e-04
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYHKTGEE 332
           EKKG++  I DKLPG H+  ++
Sbjct: 73  EKKGVMENIKDKLPGGHQDHQQ 94



to top

>ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40)|
          Length = 306

 Score = 34.7 bits (78), Expect(2) = 2e-04
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = -1

Query: 657 APASVQTH---P*HRTSF---VRRSTATRKQRPHRAVPEEEKKGFLEKIKEKLPGGHKKP 496
           APAS  +H   P  +T+    + RS ++             KKGF  KIKEKL GG  K 
Sbjct: 196 APASAGSHSHAPEKKTALGEQLHRSNSSSSSSEDDGQGGRRKKGFTTKIKEKLGGGKHKK 255

Query: 495 EDAAAVPVT 469
           ++   V  T
Sbjct: 256 DEHTTVATT 264



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 561 EEEKKGFLEKIKEKLPGGH 505
           E EKK  L+KIK+KLPG H
Sbjct: 283 EHEKKSMLDKIKDKLPGHH 301



 Score = 30.0 bits (66), Expect(2) = 2e-04
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKK +L KI DKLPG+H
Sbjct: 285 EKKSMLDKIKDKLPGHH 301



to top

>DHR15_WHEAT (Q00742) Dehydrin Rab15|
          Length = 149

 Score = 35.0 bits (79), Expect(2) = 3e-04
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHK 502
           KKG  EKIKEKLPGGHK
Sbjct: 74  KKGMKEKIKEKLPGGHK 90



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG ++KIKEKLPG H
Sbjct: 133 EKKGIMDKIKEKLPGQH 149



 Score = 28.9 bits (63), Expect(2) = 3e-04
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG++ KI +KLPG H
Sbjct: 133 EKKGIMDKIKEKLPGQH 149



to top

>XERO1_ARATH (P25863) Dehydrin Xero 1|
          Length = 128

 Score = 36.6 bits (83), Expect(2) = 7e-04
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG +EKIKEKLPGGH
Sbjct: 111 EKKGMMEKIKEKLPGGH 127



 Score = 30.8 bits (68), Expect(2) = 0.012
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           +KKG  EKIKEKLPG H
Sbjct: 72  KKKGITEKIKEKLPGHH 88



 Score = 27.7 bits (60), Expect(2) = 0.012
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG++ KI +KLPG H
Sbjct: 111 EKKGMMEKIKEKLPGGH 127



 Score = 26.2 bits (56), Expect(2) = 7e-04
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 734 EKLKXKLPGHKDNEGXARDGPT 669
           EK+K KLPGH D+   +  G T
Sbjct: 78  EKIKEKLPGHHDSNKTSSLGST 99



to top

>DH16B_ORYSA (P22911) Dehydrin Rab16B|
          Length = 164

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKGF++KIKEKLPG H
Sbjct: 148 EKKGFMDKIKEKLPGQH 164



 Score = 32.3 bits (72), Expect(2) = 0.003
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHK 502
           KKG  EKIKEKLPGG+K
Sbjct: 90  KKGIKEKIKEKLPGGNK 106



 Score = 28.1 bits (61), Expect(2) = 0.003
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG + KI +KLPG H
Sbjct: 148 EKKGFMDKIKEKLPGQH 164



to top

>DHR25_ORYSA (P30287) Dehydrin Rab25 (Drought-resistant protein 1) (rDRP1)|
          Length = 228

 Score = 33.5 bits (75), Expect(2) = 0.005
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGHKKPEDAAA 481
           +KK   EKIKEKLPG HK+ E   A
Sbjct: 164 KKKSIKEKIKEKLPGSHKQEEQKQA 188



 Score = 32.7 bits (73), Expect(2) = 0.19
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -1

Query: 570 AVPEEEKKGFLEKIKEKLPG-GH 505
           A  + EKKG +EKIKEKLPG GH
Sbjct: 205 AAGKHEKKGIVEKIKEKLPGHGH 227



 Score = 26.2 bits (56), Expect(2) = 0.005
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGY 350
           EKKG++ KI +KLPG+
Sbjct: 210 EKKGIVEKIKEKLPGH 225



 Score = 21.6 bits (44), Expect(2) = 0.19
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -2

Query: 734 EKLKXKLPG-HKDNE 693
           EK+K KLPG HK  E
Sbjct: 170 EKIKEKLPGSHKQEE 184



to top

>DHR18_ARATH (P30185) Dehydrin Rab18|
          Length = 186

 Score = 32.3 bits (72), Expect(2) = 0.007
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGG 508
           EKKG ++KIKEKLPGG
Sbjct: 169 EKKGMMDKIKEKLPGG 184



 Score = 31.2 bits (69), Expect(2) = 0.025
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHKKPEDAAAV 478
           KKG  +KIKEKLPG H +   A A+
Sbjct: 127 KKGITQKIKEKLPGHHDQSGQAQAM 151



 Score = 31.2 bits (69), Expect = 3.5
 Identities = 24/90 (26%), Positives = 34/90 (37%)
 Frame = -3

Query: 577 TPGSARGGEERLLGKDQGEAARRPQEAGGRCRGARHAPLXXXXXXXXXXXXXXXXXXXRK 398
           T G   GG  R  G++Q       +E+GG   G  H                       +
Sbjct: 77  TEGFGTGGGARHHGQEQLH-----KESGGGLGGMLHR------SGSGSSSSSEDDGQGGR 125

Query: 397 EKKGLLGKIMDKLPGYHKTGEEDKAAAPSG 308
            KKG+  KI +KLPG+H    + +A    G
Sbjct: 126 RKKGITQKIKEKLPGHHDQSGQAQAMGGMG 155



 Score = 26.9 bits (58), Expect(2) = 0.007
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 734 EKLKXKLPGHKDNEGXAR 681
           +K+K KLPGH D  G A+
Sbjct: 132 QKIKEKLPGHHDQSGQAQ 149



 Score = 26.2 bits (56), Expect(2) = 0.025
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPG 353
           EKKG++ KI +KLPG
Sbjct: 169 EKKGMMDKIKEKLPG 183



to top

>DHN1_HORVU (P12951) Dehydrin DHN1 (B8)|
          Length = 139

 Score = 32.7 bits (73), Expect(2) = 0.012
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 627 HRTSFV--RRSTATRKQRPHRAVPEEEKKGFLEKIKEKLPGGHKKPEDAA 484
           H+T  V  R  +++        V    KKG  EKIKEKLPGG  K  DAA
Sbjct: 52  HKTDGVLRRSGSSSSSSSEDDGVGGRRKKGMKEKIKEKLPGGAHK--DAA 99



 Score = 32.0 bits (71), Expect = 2.0
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGG 508
           EKKG ++KIKEKLPGG
Sbjct: 122 EKKGVMDKIKEKLPGG 137



 Score = 25.8 bits (55), Expect(2) = 0.012
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPG 353
           EKKG++ KI +KLPG
Sbjct: 122 EKKGVMDKIKEKLPG 136



to top

>XERO2_ARATH (P42758) Dehydrin Xero 2 (Low-temperature-induced protein LTI30)|
          Length = 193

 Score = 32.7 bits (73), Expect(2) = 0.25
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 600 TATRKQRPHRAVPEEEKKGFLEKIKEKLPGGH 505
           T T     +  V   E K  ++KIKEKLPGGH
Sbjct: 161 TGTTTSYGNTGVVHHENKSTMDKIKEKLPGGH 192



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -1

Query: 567 VPEEEKKGFLEKIKEKLPGGH 505
           V   EKKG  EKIKE+LPG H
Sbjct: 136 VVHHEKKGIAEKIKEQLPGHH 156



 Score = 28.9 bits (63), Expect(2) = 0.019
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG+  K+M++LPG+H
Sbjct: 65  EKKGMTEKVMEQLPGHH 81



 Score = 28.9 bits (63), Expect(2) = 0.019
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG+  K+M++LPG+H
Sbjct: 38  EKKGMTEKVMEQLPGHH 54



 Score = 28.9 bits (63), Expect(2) = 0.019
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 567 VPEEEKKGFLEKIKEKLPGGH 505
           V   EKKG  EK+ E+LPG H
Sbjct: 34  VVHHEKKGMTEKVMEQLPGHH 54



 Score = 28.9 bits (63), Expect(2) = 0.019
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           +KKG  EKI EKLPG H
Sbjct: 11  QKKGITEKIMEKLPGHH 27



 Score = 28.1 bits (61), Expect(2) = 0.12
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYHKT 341
           EKKG+  KI ++LPG+H T
Sbjct: 140 EKKGIAEKIKEQLPGHHGT 158



 Score = 28.1 bits (61), Expect(2) = 0.069
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG  EK+ E+LPG H
Sbjct: 65  EKKGMTEKVMEQLPGHH 81



 Score = 27.7 bits (60), Expect(2) = 0.069
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKK +  K+M+KLPG+H
Sbjct: 103 EKKSVTEKVMEKLPGHH 119



 Score = 26.9 bits (58), Expect(2) = 0.12
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKK   EK+ EKLPG H
Sbjct: 103 EKKSVTEKVMEKLPGHH 119



 Score = 21.2 bits (43), Expect(2) = 0.25
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 734 EKLKXKLPGHKDNEGXARDGPT 669
           EK+K +LPGH    G  + G T
Sbjct: 146 EKIKEQLPGH---HGTHKTGTT 164



to top

>DHLEA_ARATH (Q96261) Probable dehydrin LEA|
          Length = 185

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG LEKIK+KLPG H
Sbjct: 164 EKKGILEKIKDKLPGHH 180



 Score = 32.0 bits (71), Expect(2) = 0.020
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPGYH 347
           EKKG+L KI DKLPG+H
Sbjct: 164 EKKGILEKIKDKLPGHH 180



 Score = 25.8 bits (55), Expect(2) = 0.020
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHKKPEDAAAVPVT 469
           KK   EKIKEK   G  K E   A   T
Sbjct: 126 KKSIKEKIKEKFGSGKHKDEQTPATATT 153



to top

>DHA_CRAPL (P22238) Desiccation-related protein clone PCC27-04|
          Length = 117

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -1

Query: 558 EEKKGFLEKIKEKLPGGH 505
           EEKKG +EKIKEKLPG H
Sbjct: 100 EEKKGVMEKIKEKLPGQH 117



 Score = 28.5 bits (62), Expect(2) = 0.13
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYH 347
           +EKKG++ KI +KLPG H
Sbjct: 100 EEKKGVMEKIKEKLPGQH 117



 Score = 26.6 bits (57), Expect(2) = 0.13
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGG 508
           KK   EK+KEKLPGG
Sbjct: 65  KKPIKEKVKEKLPGG 79



to top

>DHN1_PEA (P28639) Dehydrin DHN1|
          Length = 197

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 603 STATRKQRPHRAVPEEEKKGFLEKIKEKLPG 511
           +T     R    V   EKKG ++KIKEKLPG
Sbjct: 160 NTGQEYVREEHRVDHGEKKGIMDKIKEKLPG 190



 Score = 27.7 bits (60), Expect(2) = 0.25
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPG 511
           +KKG ++KIKEK+PG
Sbjct: 119 DKKGVMDKIKEKIPG 133



 Score = 26.2 bits (56), Expect(2) = 0.25
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 397 EKKGLLGKIMDKLPG 353
           EKKG++ KI +KLPG
Sbjct: 176 EKKGIMDKIKEKLPG 190



to top

>DHB_CRAPL (P22239) Desiccation-related protein clone PCC6-19 (CDET6-19)|
          Length = 155

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 576 HRAVPEEEKKGFLEKIKEKLPGG 508
           H    + EKKG ++KIKEKLPGG
Sbjct: 131 HGQAQQHEKKGIMDKIKEKLPGG 153



 Score = 31.2 bits (69), Expect = 3.5
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHKKPED 490
           KKG  +K+KEKLPGGH    D
Sbjct: 101 KKGMKDKMKEKLPGGHGTTTD 121



to top

>DH16C_ORYSA (P22912) Dehydrin Rab16C|
          Length = 164

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKGF++KIKEKLPG H
Sbjct: 148 EKKGFMDKIKEKLPGQH 164



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHK 502
           KKG  EKIKEKLPGG+K
Sbjct: 88  KKGIKEKIKEKLPGGNK 104



to top

>DHLE_RAPSA (P21298) Late embryogenesis abundant protein (Protein LEA)|
          Length = 184

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 18/32 (56%), Positives = 18/32 (56%)
 Frame = -1

Query: 600 TATRKQRPHRAVPEEEKKGFLEKIKEKLPGGH 505
           T T       A    EKKG LEKIKEKLPG H
Sbjct: 149 TTTTTTTGAAADQHHEKKGILEKIKEKLPGHH 180



 Score = 33.1 bits (74), Expect = 0.91
 Identities = 19/84 (22%), Positives = 34/84 (40%)
 Frame = -3

Query: 598 GDAKTEATPGSARGGEERLLGKDQGEAARRPQEAGGRCRGARHAPLXXXXXXXXXXXXXX 419
           G + + ++    +GG  +   KD+     + +  GG+ +  +                  
Sbjct: 101 GSSSSSSSEDDGQGGRRKKSIKDK----IKDKLGGGKHKDEQTPTTATTTGPTTTTTTTG 156

Query: 418 XXXXXRKEKKGLLGKIMDKLPGYH 347
                  EKKG+L KI +KLPG+H
Sbjct: 157 AAADQHHEKKGILEKIKEKLPGHH 180



to top

>DHN2_HORVU (P12952) Dehydrin DHN2 (B9)|
          Length = 143

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -1

Query: 576 HRAVPEEEKKGFLEKIKEKLPGG 508
           H A    EKKG ++KIKEKLPGG
Sbjct: 119 HGAEATGEKKGVMDKIKEKLPGG 141



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 627 HRTSFV--RRSTATRKQRPHRAVPEEEKKGFLEKIKEKLPGGHKKPEDAA 484
           H+T  V  R  +++        V    KKG  EKIKEKLPGG  K  DAA
Sbjct: 55  HKTDGVLRRSGSSSSSSSEDDGVGGRRKKGMKEKIKEKLPGGAHK--DAA 102



to top

>DHN4_HORVU (P12949) Dehydrin DHN4 (B18)|
          Length = 225

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGH 505
           KKG  EKIKEKLPGGH
Sbjct: 78  KKGIKEKIKEKLPGGH 93



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG ++KIKEKLPG H
Sbjct: 209 EKKGIMDKIKEKLPGQH 225



to top

>DHR21_ORYSA (P12253) Water stress-inducible protein Rab21|
          Length = 172

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 627 HRTSFV--RRSTATRKQRPHRAVPEEEKKGFLEKIKEKLPGGHKKPEDAA 484
           H+T  V  R  +++        +    KKG  EKIKEKLPGG+K  +  A
Sbjct: 73  HKTGGVLQRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGEQQHA 122



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG ++KIKEKLPG H
Sbjct: 156 EKKGIMDKIKEKLPGQH 172



 Score = 31.2 bits (69), Expect = 3.5
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = -3

Query: 553 EERLLGKDQGEAARRPQEAGGRCRGARHAPLXXXXXXXXXXXXXXXXXXXRKEKKGLLGK 374
           +E+L G ++GE     Q A G   GA                          EKKG++ K
Sbjct: 108 KEKLPGGNKGEQ----QHAMGGTGGAYGQQGHGTGMTTGTTGAHGTTTTDTGEKKGIMDK 163

Query: 373 IMDKLPGYH 347
           I +KLPG H
Sbjct: 164 IKEKLPGQH 172



to top

>DHN3_HORVU (P12948) Dehydrin DHN3 (B17)|
          Length = 161

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG ++KIKEKLPG H
Sbjct: 145 EKKGIMDKIKEKLPGQH 161



 Score = 32.0 bits (71), Expect = 2.0
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGH 505
           KKG  +KIKEKLPGGH
Sbjct: 76  KKGLKDKIKEKLPGGH 91



 Score = 30.4 bits (67), Expect = 5.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEH 302
           + KKGL  KI +KLPG H  G++ +     G+H
Sbjct: 74  RRKKGLKDKIKEKLPGGH--GDQQQTGGTYGQH 104



to top

>DH16D_ORYSA (P22913) Dehydrin Rab16D|
          Length = 151

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 552 KKGFLEKIKEKLPGGHK 502
           KKG  EKIKEKLPGG+K
Sbjct: 73  KKGIKEKIKEKLPGGNK 89



 Score = 32.0 bits (71), Expect = 2.0
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPGGH 505
           EKKG ++KIKEKLPG H
Sbjct: 135 EKKGIVDKIKEKLPGQH 151



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -3

Query: 553 EERLLGKDQGEAARRPQEAGGRCRGARHAPLXXXXXXXXXXXXXXXXXXXRK--EKKGLL 380
           +E+L G ++G   ++ QE      G  + P                        EKKG++
Sbjct: 81  KEKLPGGNKGNNQQQQQEHTTTTTGGAYGPQGHDTKIATGAHGGTAATTADAGGEKKGIV 140

Query: 379 GKIMDKLPGYH 347
            KI +KLPG H
Sbjct: 141 DKIKEKLPGQH 151



to top

>TAS14_LYCES (P22240) Abscisic acid and environmental stress-inducible protein|
           TAS14 (Dehydrin TAS14)
          Length = 130

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -1

Query: 558 EEKKGFLEKIKEKLPGGH 505
           EEKKG ++KIK+K+PG H
Sbjct: 113 EEKKGMMDKIKDKIPGMH 130



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
 Frame = -3

Query: 400 KEKKGLLGKIMDKLPGYHK------TGEEDK 326
           + KKGL  KIM+K+PG H+      TGEE K
Sbjct: 86  RRKKGLKEKIMEKMPGQHEGEYGQTTGEEKK 116



 Score = 30.8 bits (68), Expect = 4.5
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = -3

Query: 556 GEERLLGKDQGEAARRPQEAGGRCRGARHAPLXXXXXXXXXXXXXXXXXXXRKEKKGLLG 377
           G+++L   D   ++    E G R +G +   +                    +EKKG++ 
Sbjct: 65  GQQQLRRSDSSSSSEDDGEGGRRKKGLKEKIMEKMPGQHEGEYGQTTG----EEKKGMMD 120

Query: 376 KIMDKLPGYH 347
           KI DK+PG H
Sbjct: 121 KIKDKIPGMH 130



to top

>DHN2_PEA (P28640) Dehydrin DHN2|
          Length = 232

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 603 STATRKQRPHRAVPEEEKKGFLEKIKEKLPG 511
           +T     R    V   EKKG ++KIKEKLPG
Sbjct: 195 NTGQEYVREEHRVDHGEKKGIMDKIKEKLPG 225



to top

>DHN3_PEA (P28641) Dehydrin DHN3|
          Length = 232

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -1

Query: 555 EKKGFLEKIKEKLPG 511
           EKKG +EKIKEKLPG
Sbjct: 211 EKKGIMEKIKEKLPG 225



to top

>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 84  HPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS*HGLKLKANTTHA 239
           HP P S P+  P+    H HP P+ +  P  Q  S P   HG +L  +T+++
Sbjct: 213 HPHPHSHPHSHPHP---HPHPHPHQIPHPHPQPHSQP---HGHRLLRSTSNS 258



to top

>ITA7_HUMAN (Q13683) Integrin alpha-7 precursor [Contains: Integrin alpha-7|
           heavy chain; Integrin alpha-7 light chain]
          Length = 1181

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +2

Query: 467 CVTGTAAASSGFLWPPGSFSLIFSKKPFFSSSGTARCGLCFRVAVDL 607
           C  GTAAA S     P S  L+F     ++  GTAR  LC + + DL
Sbjct: 197 CQQGTAAAFS-----PDSHYLLFGAPGTYNWKGTARVELCAQGSADL 238


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,454,156
Number of Sequences: 219361
Number of extensions: 1881324
Number of successful extensions: 5843
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5831
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7649585595
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top