Clone Name | rbasd15c17 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ERRFI_HUMAN (Q9UJM3) ERBB receptor feedback inhibitor 1 (Mitogen... | 31 | 3.5 | 2 | KGUA_MYCH2 (Q601H3) Guanylate kinase (EC 2.7.4.8) (GMP kinase) | 30 | 6.0 | 3 | EGSA_SULAC (Q4JB01) Glycerol-1-phosphate dehydrogenase [NAD(P)] ... | 30 | 7.8 |
---|
>ERRFI_HUMAN (Q9UJM3) ERBB receptor feedback inhibitor 1 (Mitogen-inducible gene| 6 protein) (Mig-6) Length = 462 Score = 30.8 bits (68), Expect = 3.5 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 448 LPLRHAVRSGPLEGHTMAERTPQMK 522 +PL HA +S P+ GH AE P K Sbjct: 65 IPLGHASKSAPMNGHCFAENGPSQK 89
>KGUA_MYCH2 (Q601H3) Guanylate kinase (EC 2.7.4.8) (GMP kinase)| Length = 197 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +3 Query: 153 TQEEQRQAVVSTFYFPLQIHSFKQTQQLDKYSTWICWF 266 T+E++R + YF L + FK+ + D++ W C F Sbjct: 42 TREKRRDEINGVNYFFLTVQEFKEKIENDEFIEWSCHF 79
>EGSA_SULAC (Q4JB01) Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC 1.1.1.261)| (sn-glycerol-1-phosphate dehydrogenase) (G-1-P dehydrogenase) (Enantiomeric glycerophosphate synthase) Length = 356 Score = 29.6 bits (65), Expect = 7.8 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -2 Query: 627 VAGGLRAPIGLENIDLNADSAVAASYPNMGMYTQLFHLGS---AFGHGVPLQRTR 472 +AG R G E++ +A + YPN+G++ +L LG+ A+ HG+ +R R Sbjct: 244 MAGSTRPASGSEHLFAHA---IELLYPNLGLHGELVALGTIMMAYIHGINWRRIR 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,793,561 Number of Sequences: 219361 Number of extensions: 1297141 Number of successful extensions: 3028 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3028 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)