Clone Name | rbasd14n16 |
---|---|
Clone Library Name | barley_pub |
>CCD72_XENTR (Q28GR1) Coiled-coil domain-containing protein 72| Length = 64 Score = 37.4 bits (85), Expect = 0.019 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = -3 Query: 386 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 303 ++GGK KPLKQ K + KD DE+++A+ Q Sbjct: 4 REGGKKKPLKQPKKSNKDMDEDEIAFKQ 31
>CCD72_MOUSE (Q8K003) Coiled-coil domain-containing protein 72| Length = 64 Score = 34.3 bits (77), Expect = 0.16 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -3 Query: 386 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 303 ++GGK KPLKQ K K+ DE D A+ Q Sbjct: 4 REGGKKKPLKQPKKQAKEMDEEDKAFKQ 31
>CCD72_HUMAN (Q9Y2S6) Coiled-coil domain-containing protein 72| Length = 64 Score = 34.3 bits (77), Expect = 0.16 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -3 Query: 386 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 303 ++GGK KPLKQ K K+ DE D A+ Q Sbjct: 4 REGGKKKPLKQPKKQAKEMDEEDKAFKQ 31
>GSTT2_DROME (Q9VG98) Glutathione S-transferase D2 (EC 2.5.1.18) (DmGST21)| Length = 215 Score = 33.1 bits (74), Expect = 0.36 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = +2 Query: 89 MLNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHP 247 +LNT EG L+P+ VK + I L +G W R L+ + D +LP P Sbjct: 30 LLNTMEGEQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDYLLPNDP 87
>GSTT5_DROME (Q9VG95) Glutathione S-transferase D5 (EC 2.5.1.18) (DmGST24)| Length = 216 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = +2 Query: 89 MLNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHPSG 253 +LNT E L+P+ VK + I L +G W R L+ + D + P P Sbjct: 30 LLNTLEKDQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDTLFPKDPKK 89 Query: 254 Q 256 Q Sbjct: 90 Q 90
>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 1146 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 194 GRLISSHSSSDQILPAHPSGQPWPSAPSGP 283 G++IS+ SS LP P G P P P+GP Sbjct: 389 GKVISAEGSSTIALPG-PPGPPGPIGPTGP 417
>Y022_THEAC (Q9HM47) UPF0204 protein Ta0022| Length = 256 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = +2 Query: 164 LSFSGHYEWAGRLISSHSSSDQI--LPAHPSGQPWPSAPSG 280 +S SG Y++ ++S HSS+ + L AHP+G PSA G Sbjct: 52 MSLSGKYDYLV-VLSRHSSAADVKSLTAHPTGNFGPSADLG 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,014,623 Number of Sequences: 219361 Number of extensions: 773000 Number of successful extensions: 2705 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2347 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2689 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)