ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14n09 |
|---|---|
| Clone Library Name | barley_pub |
>SPC18_PONPY (Q5R9C7) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 197 bits (500), Expect = 3e-50 Identities = 98/160 (61%), Positives = 125/160 (78%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 21 QVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 80 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF I+ REIPIVHRV+K+HE+Q +G + LTKGDNN DR LY QGQ WL+K ++ Sbjct: 81 EIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 139 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 140 GRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_HUMAN (P67812) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 197 bits (500), Expect = 3e-50 Identities = 98/160 (61%), Positives = 125/160 (78%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 21 QVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 80 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF I+ REIPIVHRV+K+HE+Q +G + LTKGDNN DR LY QGQ WL+K ++ Sbjct: 81 EIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 139 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 140 GRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_CANFA (P67811) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 197 bits (500), Expect = 3e-50 Identities = 98/160 (61%), Positives = 125/160 (78%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 21 QVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 80 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF I+ REIPIVHRV+K+HE+Q +G + LTKGDNN DR LY QGQ WL+K ++ Sbjct: 81 EIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 139 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 140 GRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_BOVIN (P67810) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 197 bits (500), Expect = 3e-50 Identities = 98/160 (61%), Positives = 125/160 (78%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 21 QVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 80 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF I+ REIPIVHRV+K+HE+Q +G + LTKGDNN DR LY QGQ WL+K ++ Sbjct: 81 EIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 139 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 140 GRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_MOUSE (Q9R0P6) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) (Sid 2895) Length = 179 Score = 196 bits (499), Expect = 4e-50 Identities = 98/160 (61%), Positives = 124/160 (77%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 21 QVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 80 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF I+ REIPIVHRV+K+HE+Q G + LTKGDNN DR LY QGQ WL+K ++ Sbjct: 81 EIVVFRIEGREIPIVHRVLKIHEKQ-DGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 139 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 140 GRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>SPC18_RAT (P42667) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 193 bits (491), Expect = 3e-49 Identities = 96/160 (60%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ GMIV+SAL+IWKGLM+ TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 21 QVLNFGMIVSSALMIWKGLMLITGSESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVG 80 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF I+ REIPIVHRV+K+HE+Q G + LTKGDNN DR LY QGQ WL+K ++ Sbjct: 81 EIVVFRIEGREIPIVHRVLKIHEKQ-DGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVV 139 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G++PY+G VTI+M + P Y ++ LGL V+ +E Sbjct: 140 GRARGFVPYIGIVTILMNDYPKFSYAVLFLLGLFVLVHRE 179
>SPC21_RAT (Q9WTR7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 193 bits (491), Expect = 3e-49 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 32 QVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAG 91 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF ++ R+IPIVHRVIKVHE+ +G++ LTKGDNN DR LY +GQ WL+K ++ Sbjct: 92 EIVVFKVEGRDIPIVHRVIKVHEKD-NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVV 150 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G+LPYVG VTI+M + P KY L+ +G V+ +E Sbjct: 151 GRARGFLPYVGMVTIIMNDYPKFKYALVAVMGAYVLLKRE 190
>SPC21_PONPY (Q5RC30) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 193 bits (490), Expect = 4e-49 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 32 QVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAG 91 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF ++ R+IPIVHRVIKVHE+ +G++ LTKGDNN DR LY +GQ WL+K ++ Sbjct: 92 EIVVFKVEGRDIPIVHRVIKVHEKD-NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVV 150 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G+LPYVG VTI+M + P KY L+ +G V+ +E Sbjct: 151 GRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC21_MOUSE (Q9D8V7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 193 bits (490), Expect = 4e-49 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 32 QVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAG 91 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF ++ R+IPIVHRVIKVHE+ +G++ LTKGDNN DR LY +GQ WL+K ++ Sbjct: 92 EIVVFKVEGRDIPIVHRVIKVHEKD-NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVV 150 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G+LPYVG VTI+M + P KY L+ +G V+ +E Sbjct: 151 GRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC21_HUMAN (Q9BY50) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 193 bits (490), Expect = 4e-49 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 32 QVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAG 91 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF ++ R+IPIVHRVIKVHE+ +G++ LTKGDNN DR LY +GQ WL+K ++ Sbjct: 92 EIVVFKVEGRDIPIVHRVIKVHEKD-NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVV 150 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G+LPYVG VTI+M + P KY L+ +G V+ +E Sbjct: 151 GRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SPC21_CANFA (P13679) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 193 bits (490), Expect = 4e-49 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 1/160 (0%) Frame = -3 Query: 638 QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL-HMSQDPIRTX 462 Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL + +DPIR Sbjct: 32 QVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAG 91 Query: 461 EIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQKHHIM 282 EIVVF ++ R+IPIVHRVIKVHE+ +G++ LTKGDNN DR LY +GQ WL+K ++ Sbjct: 92 EIVVFKVEGRDIPIVHRVIKVHEKD-NGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVV 150 Query: 281 GRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 GRA G+LPYVG VTI+M + P KY L+ +G V+ +E Sbjct: 151 GRARGFLPYVGMVTIIMNDYPKFKYALLAVMGAYVLLKRE 190
>SEC11_YEAST (P15367) Signal sequence-processing protein SEC11 (EC 3.4.-.-)| Length = 167 Score = 132 bits (332), Expect = 9e-31 Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%) Frame = -3 Query: 644 LTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLHMSQDPIRT 465 L +++++ + SA + W+GL +AT S SP+VVVLSGSMEP F+RGDILFL + Sbjct: 7 LQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNRNTFNQV 66 Query: 464 XEIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQK-HH 288 ++VV+ ++ ++IPIVHRV++ H + +LTKGDNN D LYA +++L K Sbjct: 67 GDVVVYEVEGKQIPIVHRVLRQHNNHADKQF-LLTKGDNNAGNDISLYANKKIYLNKSKE 125 Query: 287 IMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITXKE 162 I+G GY P +G++TI ++E K+ L+G LGL + E Sbjct: 126 IVGTVKGYFPQLGYITIWISENKYAKFALLGMLGLSALLGGE 167
>LEPW_BACSU (P54506) Signal peptidase I W (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 190 Score = 40.4 bits (93), Expect = 0.005 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 11/162 (6%) Frame = -3 Query: 626 LGMIVTSALIIWKGLMVATGSES--PVVV------VLSGSMEPGFKRGDILFLHMSQD-- 477 L +I+ + +I+ ++++T S P V VLSGSMEP F G ++ + D Sbjct: 8 LYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSGSMEPEFNTGSLILVKEITDVK 67 Query: 476 PIRTXEIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNNFXXDRLLYAQGQLWLQ 297 ++ +++ F D + HR++ + ++ + TKGDNN D + Sbjct: 68 ELQKGDVITFMQDA-NTAVTHRIVDITKQ--GDHLLFKTKGDNNAAAD-------SAPVS 117 Query: 296 KHHIMGRAVGY-LPYVGWVTIVMTEKPIIKYLLIGALGLLVI 174 ++ + G+ LPY G++ + +PI +L+ G++++ Sbjct: 118 DENVRAQYTGFQLPYAGYM-LHFASQPIGTAVLLIVPGVMLL 158
>TRM61_YEAST (P46959) tRNA (adenine-N(1)-)-methyltransferase catalytic subunit| TRM61 (EC 2.1.1.36) (tRNA(m1A58)-methyltransferase subunit TRM61) (tRNA(m1A58)MTase subunit TRM61) (General control nonderepressible protein 14) (Protein GCD14) Length = 383 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Frame = -3 Query: 515 KRGDILFLHMSQD---PIRTXEIVVFNIDXREIPIVHRVIKVHERQXSGEVDILTKGDNN 345 K GD+ + +S+D P+R VFN P H+ + + ++ I TKG N Sbjct: 14 KEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFP--HK--DIIGKPYGSQIAIRTKGSNK 69 Query: 344 FXXDRLLYAQGQLW 303 F +L +LW Sbjct: 70 FAFVHVLQPTPELW 83
>MEGF6_RAT (O88281) Multiple epidermal growth factor-like domains 6 precursor| (EGF-like domain-containing protein 3) (Multiple EGF-like domain protein 3) Length = 1574 Score = 30.4 bits (67), Expect = 4.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -2 Query: 333 PTFVCTRAALASEASHYGTGCRLSTICWXGXYCD 232 P FV +R A YGTGC++ C +CD Sbjct: 810 PGFVGSRCQDTCSAGWYGTGCQIRCACANDGHCD 843
>SMS1_RAT (Q7TSX5) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin synthase 1) (Mob protein) Length = 419 Score = 29.6 bits (65), Expect = 8.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 580 WLXQGASRRLWWFFLVAWSLDLKGVIFC 497 ++ + + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>SMS1_MOUSE (Q8VCQ6) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin synthase 1) (Mob protein) Length = 419 Score = 29.6 bits (65), Expect = 8.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 580 WLXQGASRRLWWFFLVAWSLDLKGVIFC 497 ++ + + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>SMS1_HUMAN (Q86VZ5) Phosphatidylcholine:ceramide cholinephosphotransferase 1| (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin synthase 1) (Mob protein) Length = 419 Score = 29.6 bits (65), Expect = 8.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 580 WLXQGASRRLWWFFLVAWSLDLKGVIFC 497 ++ + + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>MEGF6_MOUSE (Q80V70) Multiple epidermal growth factor-like domains 6 (EGF-like| domain-containing protein 3) (Multiple EGF-like domain protein 3) (Fragment) Length = 656 Score = 29.6 bits (65), Expect = 8.0 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -2 Query: 288 HYGTGCRLSTICWXGXYCDD*EAXY*VPSDW 196 H+G GCRL+ C G CD P+ W Sbjct: 166 HHGAGCRLNCSCLNGGTCDRLTGHCRCPAGW 196
>DHOM_LACLC (P52985) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 428 Score = 29.6 bits (65), Expect = 8.0 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Frame = -3 Query: 578 VATGSESPVVVVLSGSMEPGFKRGDILFLHMSQDPIRTXE--IVVFNIDXREIPIVHRVI 405 + SE +VV L G +EP K + ++ + + + V ++ R + H V Sbjct: 68 ILADSEISIVVELMGRIEPA-KTYITQAIEAGKNVVTANKDLLAVHGVELRSLAQKHHVA 126 Query: 404 KVHERQXSGEVDILTKGDNNFXXDRLLYAQGQL 306 +E +G + IL N+F D++ + G L Sbjct: 127 LYYEAAVAGGIPILRTLANSFSSDKITHLLGIL 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,390,143 Number of Sequences: 219361 Number of extensions: 1571090 Number of successful extensions: 3764 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3648 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3740 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
