>NUGC_ADICA (Q85FL7) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain J)
           (NADH-plastoquinone oxidoreductase subunit J)
          Length = 170

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = -2

Query: 501 FGYLSTMALGNDSPASYIRMVHHLIEKCMTFGMSMEECMEALSKRADVQPVVTSTVWKEL 322
           F YL +    + +P   +  V+HL +         E C++    R + Q      VWK  
Sbjct: 60  FNYLRSQCAYDATPGGSLVSVYHLTQMQDQSDQPEEICVKVFVSRTNPQIPSVYWVWKSA 119

Query: 321 EKENKEFFD 295
           E + +E +D
Sbjct: 120 EFQERESYD 128

>KPR1_YEAST (P32895) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 1)
          Length = 427

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = -2

Query: 468 DSPASYIRMVHHLIEKC--------MTFGMSMEECMEALSKRADVQPVVTSTVW 331
           D P S+I    HL++ C         T G+   +C+E L K   +  +V +  +
Sbjct: 329 DRPGSFISAAEHLVQNCGAKKVYVVATHGIFTGDCLEELEKSDAIDTIVVTNTY 382

>NUGC_MESVI (Q9MUR1) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain J)
           (NADH-plastoquinone oxidoreductase subunit J)
          Length = 174

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -2

Query: 501 FGYLSTMALGNDSPASYIRMVHHLIEKCMTFGMSMEECMEALSKRADVQPVVTST--VWK 328
           F YL +    + SP   +  V+HL +         E C++    R   +P++ S   +WK
Sbjct: 64  FNYLRSQCAYDVSPGGDLASVYHLTKVDDNADQPQEVCIKVFVPR--TKPIIPSVFWIWK 121

Query: 327 ELEKENKEFFDRY 289
             + + +E +D +
Sbjct: 122 TADFQERESYDMF 134

>FX4L4_HUMAN (Q8WXT5) Forkhead box protein D4-like 4 (Forkhead box protein D4B)|
           (Myeloid factor-gamma)
          Length = 416

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 367 ALGQRLHALLHAHPERHALLNQMVHHA 447
           A G+R +ALLH HP R+ LL+  V+ A
Sbjct: 254 APGRRPYALLHPHPLRYLLLSARVYAA 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,560,971
Number of Sequences: 219361
Number of extensions: 1323086
Number of successful extensions: 4331
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4331
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)