>NU1M_STRCA (O21397) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 324

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 252 SLGA*SQCHFSLQCXKLILLSRGFLWSRASWLRLAWDR 365
           SL   S+    +   K +LLS GFLW RAS+ R  +D+
Sbjct: 253 SLNLPSELFPLILATKTLLLSSGFLWVRASYPRFRYDQ 290

>NU1M_ALLMI (O47868) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 321

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 24/79 (30%), Positives = 37/79 (46%)
 Frame = +3

Query: 129 FLPRSSNVSHHYTHTGQIYV*PDSPATTYHPANHLYIXXLHSLGA*SQCHFSLQCXKLIL 308
           FL   +N+    T T  +++ P +P  T+ PA  L+   L S              K +L
Sbjct: 227 FLAEYANIMLMNTLTTTLFLSPSTP--TFLPA--LFTIALMS--------------KALL 268

Query: 309 LSRGFLWSRASWLRLAWDR 365
           L+  FLW RAS+ R  +D+
Sbjct: 269 LTMSFLWVRASYPRFRYDQ 287

>AT1A2_HUMAN (P50993) Sodium/potassium-transporting ATPase alpha-2 chain|
           precursor (EC 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2)
          Length = 1020

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +3

Query: 300 LILLSRGFLWSRASWLRLAWDRRRMN 377
           +IL   GFL SR   +RL WD R MN
Sbjct: 868 VILAENGFLPSRLLGIRLDWDDRTMN 893

>NU1M_COTJA (P24968) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 324

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 297 KLILLSRGFLWSRASWLRLAWDR 365
           K++LLS  FLW RAS+ R  +D+
Sbjct: 269 KVLLLSSSFLWIRASYPRFRYDQ 291

>NU1M_COTCH (Q85UK4) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 324

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 297 KLILLSRGFLWSRASWLRLAWDR 365
           K++LLS  FLW RAS+ R  +D+
Sbjct: 269 KVLLLSSSFLWVRASYPRFRYDQ 291

>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 294  CTAS*NGIVIRPPVNEEXKCTNGWLDGMWLLVSLATHIFAPCVYNGG 154
            C A  N I +     E   C NGW +G+W+  S   H     V NGG
Sbjct: 1655 CEAPANVIAVHSQTIEVPDCPNGW-EGLWIGYSFLMH---TAVGNGG 1697

>NU1M_PICCA (P48901) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 351

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 297 KLILLSRGFLWSRASWLRLAWD 362
           K I+L+ GF+W RAS+ RL +D
Sbjct: 295 KSIILTYGFIWVRASFPRLRYD 316

>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 398 EPVVTIPIHTAPVPGKAQPTRPAPQK 321
           +PV T P    P P K QP  P P K
Sbjct: 408 QPVATKPQPQQPAPAKPQPQHPTPAK 433

>NU1M_CHICK (P18936) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 324

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 297 KLILLSRGFLWSRASWLRLAWDR 365
           K +LLS  FLW RAS+ R  +D+
Sbjct: 269 KTLLLSSSFLWIRASYPRFRYDQ 291

>YO61_CAEEL (P34600) Hypothetical protein ZK1098.1 in chromosome III|
          Length = 724

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 395 PVVTIPIHTAPVPGKAQPTRPAP 327
           P++ +P H+   P  A PTRP+P
Sbjct: 40  PLLQMPTHSVVAPHVAAPTRPSP 62

>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)|
          Length = 458

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
 Frame = -2

Query: 405 TTGACC-----NYSYSYGACPRQGAT 343
           +T  CC      Y Y++G CP +GAT
Sbjct: 376 STTCCCIYEYGKYCYAWGCCPLEGAT 401

>TATB_XANAC (Q8PEX3) Sec-independent protein translocase protein tatB homolog|
          Length = 208

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 374 HTAPVPGKAQPTRPAPQK 321
           HTAPV  +AQP  PAP +
Sbjct: 139 HTAPVIAQAQPIAPAPHQ 156

>CCNB1_XENLA (P13350) G2/mitotic-specific cyclin-B1|
          Length = 397

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 407 QLLEPVVTIPIHTAPVPGKAQPTRPAPQK 321
           +LLEP+  I  +  P P + +P+ P+P +
Sbjct: 71  KLLEPLKVIEENVCPKPAQVEPSSPSPME 99

>AT1A2_CHICK (P24797) Sodium/potassium-transporting ATPase alpha-2 chain (EC|
           3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2)
          Length = 1017

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 300 LILLSRGFLWSRASWLRLAWDRRRMN 377
           +IL   GFL +R   +RLAWD R  N
Sbjct: 865 VILAENGFLPARLLGVRLAWDDRSTN 890

>SPZ_DROME (P48607) Protein spaetzle precursor [Contains: Protein spaetzle|
           C-106]
          Length = 326

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 87  SIKQLEINTELEQPFLPRSSNVSHHYTHTGQIYV*PDSPATTYHP 221
           S+++ +   + EQP  PR         H    +V PDSP   Y P
Sbjct: 119 SLQRTDTEVQSEQPIPPR---------HPSDTFVFPDSPIAKYRP 154

>Y976_TREPA (O83941) Hypothetical protein TP0976|
          Length = 459

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 117 LEQPFLPRSSNVSHHYTHTGQIY 185
           L +P LP +  +SHH  H G  Y
Sbjct: 434 LSEPVLPHAQALSHHTVHAGGTY 456


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,257,749
Number of Sequences: 219361
Number of extensions: 1100831
Number of successful extensions: 3021
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3017
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)