ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14m16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YF9G_SCHPO (P79058) Hypothetical protein C10F6.16 in chromosome I 29 6.4

>YF9G_SCHPO (P79058) Hypothetical protein C10F6.16 in chromosome I|
          Length = 139

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 504 FGGLIPKKPPLISKDHE-RAYFDSADWALGKSGQ 406
           +G L  +K  L+ K  + R YFDS D+AL K+G+
Sbjct: 41  YGRLPQRKDLLVQKLQQGRKYFDSGDYALNKAGK 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,508,151
Number of Sequences: 219361
Number of extensions: 1269971
Number of successful extensions: 3499
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3499
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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