Clone Name | rbasd15b15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RAD9B_MOUSE (Q6WBX7) Cell cycle checkpoint control protein RAD9B... | 33 | 0.66 | 2 | RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B h... | 33 | 0.86 |
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>RAD9B_MOUSE (Q6WBX7) Cell cycle checkpoint control protein RAD9B homolog (RAD9| homolog B) (mRAD9B) Length = 403 Score = 33.1 bits (74), Expect = 0.66 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 327 LWLCPLREGQTRRRCLSCHVVYNYLFFSSL 238 LWL P +G R SCH Y Y+ FSS+ Sbjct: 28 LWLDPSEKGLALRSVNSCHSTYGYVLFSSM 57
>RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B homolog (RAD9| homolog B) Length = 398 Score = 32.7 bits (73), Expect = 0.86 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 327 LWLCPLREGQTRRRCLSCHVVYNYLFFSSL 238 LWL P +G R SCH Y Y+ FSS+ Sbjct: 23 LWLDPSEKGLALRSVNSCHSTYGYVLFSSV 52 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,094,106 Number of Sequences: 219361 Number of extensions: 1199788 Number of successful extensions: 3066 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2965 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3065 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)